RNA–Protein interactions for RNA: ENST00000497993.5

TMEM39A-212, Transcript of transmembrane protein 39A, humanhuman

TSL 3

Gene TMEM39A, Length 590 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39A-212ENST00000497993 CNN2Q99439 309 aaKnown RBP4.8□□□□□ -1.64
TMEM39A-212ENST00000497993 SMR3AQ99954 134 aa4.8□□□□□ -1.64
TMEM39A-212ENST00000497993 RBM4BQ9BQ04 359 aaKnown RBP4.8□□□□□ -1.64
TMEM39A-212ENST00000497993 TMEM246Q9BRR3 403 aa4.8□□□□□ -1.64
TMEM39A-212ENST00000497993 RBM4Q9BWF3 364 aaKnown RBP4.8□□□□□ -1.64
TMEM39A-212ENST00000497993 PLA2G12AQ9BZM1 189 aa4.8□□□□□ -1.64
TMEM39A-212ENST00000497993 NIPAL2Q9H841 368 aa4.8□□□□□ -1.64
TMEM39A-212ENST00000497993 NTN4Q9HB63 628 aa4.8□□□□□ -1.64
TMEM39A-212ENST00000497993 SIGLEC8Q9NYZ4 499 aa4.8□□□□□ -1.64
TMEM39A-212ENST00000497993 MYEF2Q9P2K5 600 aaKnown RBP4.8□□□□□ -1.64
TMEM39A-212ENST00000497993 POMPQ9Y244 141 aa4.8□□□□□ -1.64
TMEM39A-212ENST00000497993 KPTNQ9Y664 436 aa4.8□□□□□ -1.64
TMEM39A-212ENST00000497993 LHFPL6Q9Y693 200 aa4.8□□□□□ -1.64
TMEM39A-212ENST00000497993 CUBNO60494 3623 aa4.8□□□□□ -1.64
TMEM39A-212ENST00000497993 A0A1W2PRD5 423 aa4.79□□□□□ -1.64
TMEM39A-212ENST00000497993 DHRS12A0PJE2 317 aa4.79□□□□□ -1.64
TMEM39A-212ENST00000497993 SGCEO43556 437 aa4.79□□□□□ -1.64
TMEM39A-212ENST00000497993 OR10H3O60404 316 aa4.79□□□□□ -1.64
TMEM39A-212ENST00000497993 CRLF1O75462 422 aa4.79□□□□□ -1.64
TMEM39A-212ENST00000497993 ATP5HO75947 161 aa4.79□□□□□ -1.64
TMEM39A-212ENST00000497993 PATE4P0C8F1 98 aa4.79□□□□□ -1.64
TMEM39A-212ENST00000497993 HIST1H1CP16403 213 aaKnown RBP4.79□□□□□ -1.64
TMEM39A-212ENST00000497993 USF1P22415 310 aaPredicted RBP4.79□□□□□ -1.64
TMEM39A-212ENST00000497993 APLNRP35414 380 aa4.79□□□□□ -1.64
TMEM39A-212ENST00000497993 GGT2P36268 569 aa4.79□□□□□ -1.64
TMEM39A-212ENST00000497993 GUCA1AP43080 201 aaPredicted RBP4.79□□□□□ -1.64
TMEM39A-212ENST00000497993 HAAOP46952 286 aa4.79□□□□□ -1.64
TMEM39A-212ENST00000497993 RFX2P48378 723 aa4.79□□□□□ -1.64
TMEM39A-212ENST00000497993 TMEM33P57088 247 aa4.79□□□□□ -1.64
TMEM39A-212ENST00000497993 BRWD1-AS2P59051 145 aa4.79□□□□□ -1.64
TMEM39A-212ENST00000497993 ECH1Q13011 328 aa4.79□□□□□ -1.64
TMEM39A-212ENST00000497993 MICAQ29983 383 aa4.79□□□□□ -1.64
TMEM39A-212ENST00000497993 DMRTC1Q5HYR2 192 aa4.79□□□□□ -1.64
TMEM39A-212ENST00000497993 LINC01590Q5TEZ4 76 aa4.79□□□□□ -1.64
TMEM39A-212ENST00000497993 SLC18B1Q6NT16 456 aa4.79□□□□□ -1.64
TMEM39A-212ENST00000497993 FAHD2BQ6P2I3 314 aaPredicted RBP4.79□□□□□ -1.64
TMEM39A-212ENST00000497993 FAHD1Q6P587 224 aa4.79□□□□□ -1.64
TMEM39A-212ENST00000497993 TMEM179BQ7Z7N9 219 aa4.79□□□□□ -1.64
TMEM39A-212ENST00000497993 HIPK1Q86Z02 1210 aa4.79□□□□□ -1.64
TMEM39A-212ENST00000497993 OR6V1Q8N148 313 aa4.79□□□□□ -1.64
TMEM39A-212ENST00000497993 SVOPLQ8N434 492 aa4.79□□□□□ -1.64
TMEM39A-212ENST00000497993 JAGN1Q8N5M9 183 aa4.79□□□□□ -1.64
TMEM39A-212ENST00000497993 C15orf54Q8N8G6 183 aa4.79□□□□□ -1.64
TMEM39A-212ENST00000497993 PRR26Q8N8Z3 221 aa4.79□□□□□ -1.64
TMEM39A-212ENST00000497993 OR9Q2Q8NGE9 314 aa4.79□□□□□ -1.64
TMEM39A-212ENST00000497993 OR52L1Q8NGH7 329 aa4.79□□□□□ -1.64
TMEM39A-212ENST00000497993 OR1B1Q8NGR6 318 aa4.79□□□□□ -1.64
TMEM39A-212ENST00000497993 OR6F1Q8NGZ6 308 aa4.79□□□□□ -1.64
TMEM39A-212ENST00000497993 KLF14Q8TD94 323 aaPredicted RBP4.79□□□□□ -1.64
TMEM39A-212ENST00000497993 CACNG8Q8WXS5 425 aa4.79□□□□□ -1.64
TMEM39A-212ENST00000497993 C11orf40Q8WZ69 217 aa4.79□□□□□ -1.64
TMEM39A-212ENST00000497993 FAHD2AQ96GK7 314 aa4.79□□□□□ -1.64
TMEM39A-212ENST00000497993 THTPAQ9BU02 230 aa4.79□□□□□ -1.64
TMEM39A-212ENST00000497993 CHID1Q9BWS9 393 aa4.79□□□□□ -1.64
TMEM39A-212ENST00000497993 BPESC1Q9GZL8 116 aa4.79□□□□□ -1.64
TMEM39A-212ENST00000497993 CSTL1Q9H114 145 aa4.79□□□□□ -1.64
TMEM39A-212ENST00000497993 PPA2Q9H2U2 334 aa4.79□□□□□ -1.64
TMEM39A-212ENST00000497993 Q9HAA7 133 aa4.79□□□□□ -1.64
TMEM39A-212ENST00000497993 ZC4H2Q9NQZ6 224 aa4.79□□□□□ -1.64
TMEM39A-212ENST00000497993 CMC2Q9NRP2 79 aa4.79□□□□□ -1.64
TMEM39A-212ENST00000497993 ARMC1Q9NVT9 282 aa4.79□□□□□ -1.64
TMEM39A-212ENST00000497993 CYB5R1Q9UHQ9 305 aa4.79□□□□□ -1.64
TMEM39A-212ENST00000497993 ENPP5Q9UJA9 477 aa4.79□□□□□ -1.64
TMEM39A-212ENST00000497993 IER3IP1Q9Y5U9 82 aa4.79□□□□□ -1.64
TMEM39A-212ENST00000497993 FBN1P35555 2871 aaKnown RBP4.78□□□□□ -1.64
TMEM39A-212ENST00000497993 IGLV5-52A0A0A0MRZ9 124 aa4.78□□□□□ -1.64
TMEM39A-212ENST00000497993 IGLV9-49A0A0B4J1Y8 123 aa4.78□□□□□ -1.64
TMEM39A-212ENST00000497993 IGHV4-61A0A0C4DH41 118 aa4.78□□□□□ -1.64
TMEM39A-212ENST00000497993 IQCF6A8MYZ5 107 aa4.78□□□□□ -1.64
TMEM39A-212ENST00000497993 H7C1C5 153 aa4.78□□□□□ -1.64
TMEM39A-212ENST00000497993 SIRPB1O00241 398 aa4.78□□□□□ -1.64
TMEM39A-212ENST00000497993 TNFRSF11BO00300 401 aa4.78□□□□□ -1.64
TMEM39A-212ENST00000497993 SOCS2O14508 198 aa4.78□□□□□ -1.64
TMEM39A-212ENST00000497993 RAB29O14966 203 aa4.78□□□□□ -1.64
TMEM39A-212ENST00000497993 CHST1O43916 411 aa4.78□□□□□ -1.64
TMEM39A-212ENST00000497993 SLC16A7O60669 478 aa4.78□□□□□ -1.64
TMEM39A-212ENST00000497993 CCNB2O95067 398 aa4.78□□□□□ -1.64
TMEM39A-212ENST00000497993 RENP00797 406 aa4.78□□□□□ -1.64
TMEM39A-212ENST00000497993 GLAP06280 429 aa4.78□□□□□ -1.64
TMEM39A-212ENST00000497993 PSKH1P11801 424 aa4.78□□□□□ -1.64
TMEM39A-212ENST00000497993 DAOP14920 347 aa4.78□□□□□ -1.64
TMEM39A-212ENST00000497993 RPL35AP18077 110 aaKnown RBP4.78□□□□□ -1.64
TMEM39A-212ENST00000497993 C4BPBP20851 252 aa4.78□□□□□ -1.64
TMEM39A-212ENST00000497993 CX3CR1P49238 355 aa4.78□□□□□ -1.64
TMEM39A-212ENST00000497993 GDI2P50395 445 aaKnown RBP4.78□□□□□ -1.64
TMEM39A-212ENST00000497993 ERVS71-1P61550 626 aa4.78□□□□□ -1.64
TMEM39A-212ENST00000497993 PPP1CBP62140 327 aa4.78□□□□□ -1.64
TMEM39A-212ENST00000497993 LCN6P62502 163 aa4.78□□□□□ -1.64
TMEM39A-212ENST00000497993 LCN2P80188 198 aa4.78□□□□□ -1.64
TMEM39A-212ENST00000497993 CDK5Q00535 292 aa4.78□□□□□ -1.64
TMEM39A-212ENST00000497993 RAB40BQ12829 278 aa4.78□□□□□ -1.64
TMEM39A-212ENST00000497993 ZNF181Q2M3W8 571 aa4.78□□□□□ -1.64
TMEM39A-212ENST00000497993 ZNF718Q3SXZ3 478 aa4.78□□□□□ -1.64
TMEM39A-212ENST00000497993 ZNF260Q3ZCT1 412 aa4.78□□□□□ -1.64
TMEM39A-212ENST00000497993 ZNF774Q6NX45 483 aa4.78□□□□□ -1.64
TMEM39A-212ENST00000497993 ARL9Q6T311 187 aa4.78□□□□□ -1.64
TMEM39A-212ENST00000497993 ZNF782Q6ZMW2 699 aaPredicted RBP4.78□□□□□ -1.64
TMEM39A-212ENST00000497993 ZNF66Q6ZN08 573 aa4.78□□□□□ -1.64
TMEM39A-212ENST00000497993 LRP11Q86VZ4 500 aa4.78□□□□□ -1.64
TMEM39A-212ENST00000497993 LRRC18Q8N456 261 aa4.78□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms