RNA–Protein interactions for RNA: ENST00000497580.5

GAPVD1-220, Transcript of GTPase activating protein and VPS9 domains 1, humanhuman

TSL 2

Gene GAPVD1, Length 3,720 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPVD1-220ENST00000497580 RLN3Q8WXF3 142 aa11.3□□□□□ -0.6
GAPVD1-220ENST00000497580 BTF3L4Q96K17 158 aa11.3□□□□□ -0.6
GAPVD1-220ENST00000497580 TCFL5Q9UL49 500 aa11.3□□□□□ -0.6
GAPVD1-220ENST00000497580 TCRBV21S2A2A0A5A6 115 aa11.3□□□□□ -0.6
GAPVD1-220ENST00000497580 RPS16P62249 146 aaKnown RBP11.3□□□□□ -0.6
GAPVD1-220ENST00000497580 HHEXQ03014 270 aa11.3□□□□□ -0.6
GAPVD1-220ENST00000497580 TMEM183BQ1AE95 376 aa11.3□□□□□ -0.6
GAPVD1-220ENST00000497580 OR51H1Q8NH63 302 aa11.3□□□□□ -0.6
GAPVD1-220ENST00000497580 OR2AE1Q8NHA4 323 aa11.3□□□□□ -0.6
GAPVD1-220ENST00000497580 MRGPRX4Q96LA9 322 aa11.3□□□□□ -0.6
GAPVD1-220ENST00000497580 PARLQ9H300 379 aa11.3□□□□□ -0.6
GAPVD1-220ENST00000497580 OR6C3Q9NZP0 311 aa11.3□□□□□ -0.6
GAPVD1-220ENST00000497580 KLHL13Q9P2N7 655 aa11.3□□□□□ -0.6
GAPVD1-220ENST00000497580 A0A1W2PNR3 127 aa11.29□□□□□ -0.6
GAPVD1-220ENST00000497580 CLPSP04118 112 aa11.29□□□□□ -0.6
GAPVD1-220ENST00000497580 PMP22Q01453 160 aa11.29□□□□□ -0.6
GAPVD1-220ENST00000497580 TMEM196Q5HYL7 178 aa11.29□□□□□ -0.6
GAPVD1-220ENST00000497580 COA6Q5JTJ3 125 aaKnown RBP11.29□□□□□ -0.6
GAPVD1-220ENST00000497580 ZNF816-ZNF321PA0A0X1KG74 233 aa11.29□□□□□ -0.6
GAPVD1-220ENST00000497580 OR7C1O76099 320 aaPredicted RBP11.29□□□□□ -0.6
GAPVD1-220ENST00000497580 CDS2O95674 445 aa11.29□□□□□ -0.6
GAPVD1-220ENST00000497580 IL6RP08887 468 aaPredicted RBP11.29□□□□□ -0.6
GAPVD1-220ENST00000497580 GUCA1AP43080 201 aaPredicted RBP11.29□□□□□ -0.6
GAPVD1-220ENST00000497580 ZNF133P52736 654 aaPredicted RBP11.29□□□□□ -0.6
GAPVD1-220ENST00000497580 IL24Q13007 206 aa11.29□□□□□ -0.6
GAPVD1-220ENST00000497580 EXT1Q16394 746 aa11.29□□□□□ -0.6
GAPVD1-220ENST00000497580 ACTL10Q5JWF8 245 aa11.29□□□□□ -0.6
GAPVD1-220ENST00000497580 D2HGDHQ8N465 521 aa11.29□□□□□ -0.6
GAPVD1-220ENST00000497580 OR1K1Q8NGR3 316 aa11.29□□□□□ -0.6
GAPVD1-220ENST00000497580 MRPL30Q8TCC3 161 aaKnown RBP11.29□□□□□ -0.6
GAPVD1-220ENST00000497580 DNASE2BQ8WZ79 361 aa11.29□□□□□ -0.6
GAPVD1-220ENST00000497580 IMMP2LQ96T52 175 aa11.29□□□□□ -0.6
GAPVD1-220ENST00000497580 TMEM9BQ9NQ34 198 aa11.29□□□□□ -0.6
GAPVD1-220ENST00000497580 LILRA1O75019 489 aa11.29□□□□□ -0.6
GAPVD1-220ENST00000497580 PPYP01298 95 aa11.29□□□□□ -0.6
GAPVD1-220ENST00000497580 GYPAP02724 150 aa11.29□□□□□ -0.6
GAPVD1-220ENST00000497580 COL9A1P20849 921 aa11.29□□□□□ -0.6
GAPVD1-220ENST00000497580 LEMD1Q68G75 181 aa11.29□□□□□ -0.6
GAPVD1-220ENST00000497580 KCNIP4Q6PIL6 250 aa11.29□□□□□ -0.6
GAPVD1-220ENST00000497580 NUFIP2Q7Z417 695 aaKnown RBP11.29□□□□□ -0.6
GAPVD1-220ENST00000497580 OR13H1Q8NG92 308 aa11.29□□□□□ -0.6
GAPVD1-220ENST00000497580 B3GAT1Q9P2W7 334 aa11.29□□□□□ -0.6
GAPVD1-220ENST00000497580 RNF150Q9ULK6 438 aa11.29□□□□□ -0.6
GAPVD1-220ENST00000497580 ETV2O00321 342 aaPredicted RBP11.28□□□□□ -0.6
GAPVD1-220ENST00000497580 RRP8O43159 456 aaKnown RBP11.28□□□□□ -0.6
GAPVD1-220ENST00000497580 NPIPB7O75200 414 aa11.28□□□□□ -0.6
GAPVD1-220ENST00000497580 BPIFB3P59826 476 aa11.28□□□□□ -0.6
GAPVD1-220ENST00000497580 DTX1Q86Y01 620 aa11.28□□□□□ -0.6
GAPVD1-220ENST00000497580 SLC46A1Q96NT5 459 aa11.28□□□□□ -0.6
GAPVD1-220ENST00000497580 RBM24Q9BX46 236 aaKnown RBP11.28□□□□□ -0.6
GAPVD1-220ENST00000497580 UMODP07911 640 aa11.28□□□□□ -0.6
GAPVD1-220ENST00000497580 DEFA4P12838 97 aa11.28□□□□□ -0.6
GAPVD1-220ENST00000497580 IL3RAP26951 378 aa11.28□□□□□ -0.6
GAPVD1-220ENST00000497580 OR8G2PQ6IF36 304 aa11.28□□□□□ -0.6
GAPVD1-220ENST00000497580 CYP2G1PQ6ZSU1 146 aa11.28□□□□□ -0.6
GAPVD1-220ENST00000497580 MRGPRGQ86SM5 289 aa11.28□□□□□ -0.6
GAPVD1-220ENST00000497580 ODF3L1Q8IXM7 274 aa11.28□□□□□ -0.6
GAPVD1-220ENST00000497580 OR2V1Q8NHB1 315 aa11.28□□□□□ -0.6
GAPVD1-220ENST00000497580 LYZL4Q96KX0 146 aa11.28□□□□□ -0.6
GAPVD1-220ENST00000497580 VPS25Q9BRG1 176 aa11.28□□□□□ -0.6
GAPVD1-220ENST00000497580 MOB1AQ9H8S9 216 aa11.28□□□□□ -0.6
GAPVD1-220ENST00000497580 SLC7A10Q9NS82 523 aa11.28□□□□□ -0.6
GAPVD1-220ENST00000497580 ZFP30Q9Y2G7 519 aa11.28□□□□□ -0.6
GAPVD1-220ENST00000497580 UBE2L5PA0A1B0GUS4 154 aa11.27□□□□□ -0.6
GAPVD1-220ENST00000497580 CRYABP02511 175 aaKnown RBP11.27□□□□□ -0.6
GAPVD1-220ENST00000497580 HNRNPA1P09651 372 aaKnown RBP eCLIP11.27□□□□□ -0.6
GAPVD1-220ENST00000497580 OR5G3P0C626 314 aa11.27□□□□□ -0.6
GAPVD1-220ENST00000497580 MDH2P40926 338 aaKnown RBP11.27□□□□□ -0.6
GAPVD1-220ENST00000497580 MEF2BQ02080 365 aaPredicted RBP11.27□□□□□ -0.6
GAPVD1-220ENST00000497580 GAPTQ8N292 157 aa11.27□□□□□ -0.6
GAPVD1-220ENST00000497580 TMEM222Q9H0R3 208 aa11.27□□□□□ -0.6
GAPVD1-220ENST00000497580 ZDHHC11Q9H8X9 412 aa11.27□□□□□ -0.6
GAPVD1-220ENST00000497580 RYDENQ9NUL5 291 aaKnown RBP11.27□□□□□ -0.6
GAPVD1-220ENST00000497580 ZNF407Q9C0G0 2248 aa11.27□□□□□ -0.6
GAPVD1-220ENST00000497580 IGHV3-20A0A0C4DH32 117 aa11.27□□□□□ -0.61
GAPVD1-220ENST00000497580 ZNF16P17020 682 aaPredicted RBP11.27□□□□□ -0.61
GAPVD1-220ENST00000497580 MYBPHQ13203 477 aa11.27□□□□□ -0.61
GAPVD1-220ENST00000497580 BAGE3Q86Y29 109 aa11.27□□□□□ -0.61
GAPVD1-220ENST00000497580 BAGE2Q86Y30 109 aa11.27□□□□□ -0.61
GAPVD1-220ENST00000497580 TGIF2LYQ8IUE0 185 aa11.27□□□□□ -0.61
GAPVD1-220ENST00000497580 OR1N1Q8NGS0 311 aa11.27□□□□□ -0.61
GAPVD1-220ENST00000497580 PLPPR1Q8TBJ4 325 aa11.27□□□□□ -0.61
GAPVD1-220ENST00000497580 Q96M66 194 aa11.27□□□□□ -0.61
GAPVD1-220ENST00000497580 FRG2CA6NGY1 282 aa11.27□□□□□ -0.61
GAPVD1-220ENST00000497580 ALG1L2C9J202 215 aa11.27□□□□□ -0.61
GAPVD1-220ENST00000497580 KBTBD11O94819 623 aa11.27□□□□□ -0.61
GAPVD1-220ENST00000497580 CRYAAP02489 173 aa11.27□□□□□ -0.61
GAPVD1-220ENST00000497580 ARL4DP49703 201 aa11.27□□□□□ -0.61
GAPVD1-220ENST00000497580 PSMB3P49720 205 aa11.27□□□□□ -0.61
GAPVD1-220ENST00000497580 VEGFBP49765 207 aa11.27□□□□□ -0.61
GAPVD1-220ENST00000497580 RBX1P62877 108 aa11.27□□□□□ -0.61
GAPVD1-220ENST00000497580 SELENOHQ8IZQ5 122 aaKnown RBP11.27□□□□□ -0.61
GAPVD1-220ENST00000497580 LRTM2Q8N967 370 aa11.27□□□□□ -0.61
GAPVD1-220ENST00000497580 SLC35E1Q96K37 410 aa11.27□□□□□ -0.61
GAPVD1-220ENST00000497580 TMEM106BQ9NUM4 274 aa11.27□□□□□ -0.61
GAPVD1-220ENST00000497580 PGPEP1LA6NFU8 196 aa11.26□□□□□ -0.61
GAPVD1-220ENST00000497580 CCL25O15444 150 aa11.26□□□□□ -0.61
GAPVD1-220ENST00000497580 IGHG1P01857 330 aa11.26□□□□□ -0.61
GAPVD1-220ENST00000497580 NSDHLQ15738 373 aa11.26□□□□□ -0.61
GAPVD1-220ENST00000497580 VHLLQ6RSH7 139 aa11.26□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms