RNA–Protein interactions for RNA: ENST00000497342.1

CKS1BP2-201, Transcript of CDC28 protein kinase regulatory subunit 1B pseudogene 2, humanhuman

BASIC

Gene CKS1BP2, Length 240 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1BP2-201ENST00000497342 UCN3Q969E3 161 aa1.72□□□□□ -2.13
CKS1BP2-201ENST00000497342 RDH12Q96NR8 316 aa1.72□□□□□ -2.13
CKS1BP2-201ENST00000497342 UTP23Q9BRU9 249 aaKnown RBP1.72□□□□□ -2.13
CKS1BP2-201ENST00000497342 LXNQ9BS40 222 aa1.72□□□□□ -2.13
CKS1BP2-201ENST00000497342 NICN1Q9BSH3 213 aa1.72□□□□□ -2.13
CKS1BP2-201ENST00000497342 HES7Q9BYE0 225 aa1.72□□□□□ -2.13
CKS1BP2-201ENST00000497342 API5Q9BZZ5 524 aaKnown RBP1.72□□□□□ -2.13
CKS1BP2-201ENST00000497342 DERL2Q9GZP9 239 aa1.72□□□□□ -2.13
CKS1BP2-201ENST00000497342 CDC42EP4Q9H3Q1 356 aaKnown RBP1.72□□□□□ -2.13
CKS1BP2-201ENST00000497342 BEX1Q9HBH7 125 aa1.72□□□□□ -2.13
CKS1BP2-201ENST00000497342 PLGRKTQ9HBL7 147 aa1.72□□□□□ -2.13
CKS1BP2-201ENST00000497342 MED4Q9NPJ6 270 aa1.72□□□□□ -2.13
CKS1BP2-201ENST00000497342 ABCB10Q9NRK6 738 aa1.72□□□□□ -2.13
CKS1BP2-201ENST00000497342 RBM22Q9NW64 420 aaKnown RBP eCLIP1.72□□□□□ -2.13
CKS1BP2-201ENST00000497342 SDHAF2Q9NX18 166 aa1.72□□□□□ -2.13
CKS1BP2-201ENST00000497342 STOML2Q9UJZ1 356 aa1.72□□□□□ -2.13
CKS1BP2-201ENST00000497342 ZNF580Q9UK33 172 aa1.72□□□□□ -2.13
CKS1BP2-201ENST00000497342 PSG8Q9UQ74 426 aa1.72□□□□□ -2.13
CKS1BP2-201ENST00000497342 SNX24Q9Y343 169 aa1.72□□□□□ -2.13
CKS1BP2-201ENST00000497342 ARFGEF3Q5TH69 2177 aa1.71□□□□□ -2.14
CKS1BP2-201ENST00000497342 A0A0J9YXV3 536 aa1.71□□□□□ -2.14
CKS1BP2-201ENST00000497342 PLAC8L1A1L4L8 177 aa1.71□□□□□ -2.14
CKS1BP2-201ENST00000497342 C9J4A7 227 aa1.71□□□□□ -2.14
CKS1BP2-201ENST00000497342 TNFRSF11BO00300 401 aa1.71□□□□□ -2.14
CKS1BP2-201ENST00000497342 UPK1AO00322 258 aa1.71□□□□□ -2.14
CKS1BP2-201ENST00000497342 PSPHP1O15172 72 aa1.71□□□□□ -2.14
CKS1BP2-201ENST00000497342 PSIP1O75475 530 aaKnown RBP1.71□□□□□ -2.14
CKS1BP2-201ENST00000497342 LYPLA2O95372 231 aa1.71□□□□□ -2.14
CKS1BP2-201ENST00000497342 IGLV2-23P01705 113 aa1.71□□□□□ -2.14
CKS1BP2-201ENST00000497342 HLA-AP01891 365 aaKnown RBP1.71□□□□□ -2.14
CKS1BP2-201ENST00000497342 ORM1P02763 201 aa1.71□□□□□ -2.14
CKS1BP2-201ENST00000497342 MRPL3P09001 348 aaKnown RBP1.71□□□□□ -2.14
CKS1BP2-201ENST00000497342 RAB3AP20336 220 aa1.71□□□□□ -2.14
CKS1BP2-201ENST00000497342 SYT1P21579 422 aa1.71□□□□□ -2.14
CKS1BP2-201ENST00000497342 MYL9P24844 172 aa1.71□□□□□ -2.14
CKS1BP2-201ENST00000497342 S100A5P33763 92 aa1.71□□□□□ -2.14
CKS1BP2-201ENST00000497342 UGT2B10P36537 528 aa1.71□□□□□ -2.14
CKS1BP2-201ENST00000497342 CEACAM3P40198 252 aa1.71□□□□□ -2.14
CKS1BP2-201ENST00000497342 HCAR3P49019 387 aa1.71□□□□□ -2.14
CKS1BP2-201ENST00000497342 ERFP50548 548 aa1.71□□□□□ -2.14
CKS1BP2-201ENST00000497342 OR12D2P58182 307 aa1.71□□□□□ -2.14
CKS1BP2-201ENST00000497342 VSX2P58304 361 aaPredicted RBP1.71□□□□□ -2.14
CKS1BP2-201ENST00000497342 LYZP61626 148 aa1.71□□□□□ -2.14
CKS1BP2-201ENST00000497342 PAFAH1B2P68402 229 aa1.71□□□□□ -2.14
CKS1BP2-201ENST00000497342 SLC35A1P78382 337 aa1.71□□□□□ -2.14
CKS1BP2-201ENST00000497342 MRPS15P82914 257 aaKnown RBP1.71□□□□□ -2.14
CKS1BP2-201ENST00000497342 PITPNAQ00169 270 aa1.71□□□□□ -2.14
CKS1BP2-201ENST00000497342 BAXQ07812 192 aa1.71□□□□□ -2.14
CKS1BP2-201ENST00000497342 FADDQ13158 208 aa1.71□□□□□ -2.14
CKS1BP2-201ENST00000497342 IRF4Q15306 451 aa1.71□□□□□ -2.14
CKS1BP2-201ENST00000497342 GUCA2BQ16661 112 aa1.71□□□□□ -2.14
CKS1BP2-201ENST00000497342 IMPG1Q17R60 797 aa1.71□□□□□ -2.14
CKS1BP2-201ENST00000497342 GOLGA7BQ2TAP0 167 aa1.71□□□□□ -2.14
CKS1BP2-201ENST00000497342 TTLL9Q3SXZ7 439 aa1.71□□□□□ -2.14
CKS1BP2-201ENST00000497342 CDNFQ49AH0 187 aa1.71□□□□□ -2.14
CKS1BP2-201ENST00000497342 ZNF658BQ4V348 819 aaPredicted RBP1.71□□□□□ -2.14
CKS1BP2-201ENST00000497342 HIGD2BQ4VC39 106 aa1.71□□□□□ -2.14
CKS1BP2-201ENST00000497342 LRRC10Q5BKY1 277 aa1.71□□□□□ -2.14
CKS1BP2-201ENST00000497342 SAPCD1Q5SSQ6 148 aa1.71□□□□□ -2.14
CKS1BP2-201ENST00000497342 ATAD3CQ5T2N8 411 aa1.71□□□□□ -2.14
CKS1BP2-201ENST00000497342 ZNF658Q5TYW1 1059 aaPredicted RBP1.71□□□□□ -2.14
CKS1BP2-201ENST00000497342 DRAM2Q6UX65 266 aa1.71□□□□□ -2.14
CKS1BP2-201ENST00000497342 AHSA2Q719I0 299 aa1.71□□□□□ -2.14
CKS1BP2-201ENST00000497342 DCXRQ7Z4W1 244 aa1.71□□□□□ -2.14
CKS1BP2-201ENST00000497342 CAMK2N1Q7Z7J9 78 aa1.71□□□□□ -2.14
CKS1BP2-201ENST00000497342 PLCZ1Q86YW0 608 aa1.71□□□□□ -2.14
CKS1BP2-201ENST00000497342 C11orf53Q8IXP5 236 aa1.71□□□□□ -2.14
CKS1BP2-201ENST00000497342 C19orf18Q8NEA5 215 aa1.71□□□□□ -2.14
CKS1BP2-201ENST00000497342 LFNGQ8NES3 379 aa1.71□□□□□ -2.14
CKS1BP2-201ENST00000497342 OR10G4Q8NGN3 311 aa1.71□□□□□ -2.14
CKS1BP2-201ENST00000497342 DYNC2LI1Q8TCX1 351 aa1.71□□□□□ -2.14
CKS1BP2-201ENST00000497342 SLC37A2Q8TED4 501 aa1.71□□□□□ -2.14
CKS1BP2-201ENST00000497342 RNF133Q8WVZ7 376 aa1.71□□□□□ -2.14
CKS1BP2-201ENST00000497342 FAM3DQ96BQ1 224 aa1.71□□□□□ -2.14
CKS1BP2-201ENST00000497342 YIPF6Q96EC8 236 aa1.71□□□□□ -2.14
CKS1BP2-201ENST00000497342 TMEM101Q96IK0 257 aa1.71□□□□□ -2.14
CKS1BP2-201ENST00000497342 C20orf144Q9BQM9 153 aa1.71□□□□□ -2.14
CKS1BP2-201ENST00000497342 CNPY3Q9BT09 278 aa1.71□□□□□ -2.14
CKS1BP2-201ENST00000497342 SUCNR1Q9BXA5 334 aa1.71□□□□□ -2.14
CKS1BP2-201ENST00000497342 GABARAPL3Q9BY60 117 aa1.71□□□□□ -2.14
CKS1BP2-201ENST00000497342 DEFB126Q9BYW3 111 aa1.71□□□□□ -2.14
CKS1BP2-201ENST00000497342 NDEL1Q9GZM8 345 aa1.71□□□□□ -2.14
CKS1BP2-201ENST00000497342 ARV1Q9H2C2 271 aa1.71□□□□□ -2.14
CKS1BP2-201ENST00000497342 SAV1Q9H4B6 383 aaPredicted RBP1.71□□□□□ -2.14
CKS1BP2-201ENST00000497342 RPP21Q9H633 154 aaKnown RBP1.71□□□□□ -2.14
CKS1BP2-201ENST00000497342 ISYNA1Q9NPH2 558 aa1.71□□□□□ -2.14
CKS1BP2-201ENST00000497342 NLE1Q9NVX2 485 aaPredicted RBP1.71□□□□□ -2.14
CKS1BP2-201ENST00000497342 UBAP1Q9NZ09 502 aa1.71□□□□□ -2.14
CKS1BP2-201ENST00000497342 ZNF107Q9UII5 783 aaPredicted RBP1.71□□□□□ -2.14
CKS1BP2-201ENST00000497342 CBY1Q9Y3M2 126 aa1.71□□□□□ -2.14
CKS1BP2-201ENST00000497342 TCHHQ07283 1943 aa1.7□□□□□ -2.14
CKS1BP2-201ENST00000497342 IGHV5-51A0A0C4DH38 117 aa1.7□□□□□ -2.14
CKS1BP2-201ENST00000497342 KRTAP4-8A0A0G2JLE6 195 aa1.7□□□□□ -2.14
CKS1BP2-201ENST00000497342 A0A1B0GVY2 172 aa1.7□□□□□ -2.14
CKS1BP2-201ENST00000497342 A0A1W2PRG6 482 aa1.7□□□□□ -2.14
CKS1BP2-201ENST00000497342 FAM168BA1KXE4 195 aa1.7□□□□□ -2.14
CKS1BP2-201ENST00000497342 TMEM210A6NLX4 147 aa1.7□□□□□ -2.14
CKS1BP2-201ENST00000497342 IFITM10A6NMD0 228 aa1.7□□□□□ -2.14
CKS1BP2-201ENST00000497342 H7C1H1 209 aa1.7□□□□□ -2.14
CKS1BP2-201ENST00000497342 H7C417 338 aa1.7□□□□□ -2.14
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms