RNA–Protein interactions for RNA: ENST00000496946.1

SNRNP48-202, Transcript of small nuclear ribonucleoprotein U11/U12 subunit 48, humanhuman

TSL 2

Gene SNRNP48, Length 2,610 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP48-202ENST00000496946 H7C1C5 153 aa2.63□□□□□ -1.99
SNRNP48-202ENST00000496946 TRAF3IP2O43734 574 aaPredicted RBP2.63□□□□□ -1.99
SNRNP48-202ENST00000496946 MPDU1O75352 247 aa2.63□□□□□ -1.99
SNRNP48-202ENST00000496946 TOXO94900 526 aa2.63□□□□□ -1.99
SNRNP48-202ENST00000496946 DIRAS1O95057 198 aa2.63□□□□□ -1.99
SNRNP48-202ENST00000496946 CDRT1O95170 752 aa2.63□□□□□ -1.99
SNRNP48-202ENST00000496946 ZNF705DP0CH99 300 aaPredicted RBP2.63□□□□□ -1.99
SNRNP48-202ENST00000496946 ZNF705BP0CI00 300 aaPredicted RBP2.63□□□□□ -1.99
SNRNP48-202ENST00000496946 CT45A8P0DMV1 189 aa2.63□□□□□ -1.99
SNRNP48-202ENST00000496946 CT45A9P0DMV2 189 aa2.63□□□□□ -1.99
SNRNP48-202ENST00000496946 RPL35AP18077 110 aaKnown RBP2.63□□□□□ -1.99
SNRNP48-202ENST00000496946 ATF1P18846 271 aa2.63□□□□□ -1.99
SNRNP48-202ENST00000496946 ORM2P19652 201 aa2.63□□□□□ -1.99
SNRNP48-202ENST00000496946 PGCP20142 388 aa2.63□□□□□ -1.99
SNRNP48-202ENST00000496946 MPGP29372 298 aa2.63□□□□□ -1.99
SNRNP48-202ENST00000496946 EFNB2P52799 333 aa2.63□□□□□ -1.99
SNRNP48-202ENST00000496946 LOXL3P58215 753 aa2.63□□□□□ -1.99
SNRNP48-202ENST00000496946 GNG5P63218 68 aa2.63□□□□□ -1.99
SNRNP48-202ENST00000496946 RAB40BQ12829 278 aa2.63□□□□□ -1.99
SNRNP48-202ENST00000496946 TDRG1Q3Y452 100 aa2.63□□□□□ -1.99
SNRNP48-202ENST00000496946 CT45A2Q5DJT8 189 aa2.63□□□□□ -1.99
SNRNP48-202ENST00000496946 C1orf195Q5TG92 126 aa2.63□□□□□ -1.99
SNRNP48-202ENST00000496946 TEX43Q6ZNM6 134 aa2.63□□□□□ -1.99
SNRNP48-202ENST00000496946 SLC25A26Q70HW3 274 aa2.63□□□□□ -1.99
SNRNP48-202ENST00000496946 DTX2Q86UW9 622 aa2.63□□□□□ -1.99
SNRNP48-202ENST00000496946 ABHD12Q8N2K0 398 aa2.63□□□□□ -1.99
SNRNP48-202ENST00000496946 ACVR1CQ8NER5 493 aa2.63□□□□□ -1.99
SNRNP48-202ENST00000496946 OR5A1Q8NGJ0 315 aa2.63□□□□□ -1.99
SNRNP48-202ENST00000496946 OR4L1Q8NH43 312 aa2.63□□□□□ -1.99
SNRNP48-202ENST00000496946 PLPPR1Q8TBJ4 325 aa2.63□□□□□ -1.99
SNRNP48-202ENST00000496946 GATAD1Q8WUU5 269 aa2.63□□□□□ -1.99
SNRNP48-202ENST00000496946 SLC38A5Q8WUX1 472 aa2.63□□□□□ -1.99
SNRNP48-202ENST00000496946 OR5P3Q8WZ94 311 aa2.63□□□□□ -1.99
SNRNP48-202ENST00000496946 DNAJC19Q96DA6 116 aa2.63□□□□□ -1.99
SNRNP48-202ENST00000496946 PCED1BQ96HM7 432 aa2.63□□□□□ -1.99
SNRNP48-202ENST00000496946 BBC3Q96PG8 261 aaPredicted RBP2.63□□□□□ -1.99
SNRNP48-202ENST00000496946 C19orf24Q9BVV8 132 aa2.63□□□□□ -1.99
SNRNP48-202ENST00000496946 POLR2J3Q9H1A7 115 aaKnown RBP2.63□□□□□ -1.99
SNRNP48-202ENST00000496946 MAGIXQ9H6Y5 334 aa2.63□□□□□ -1.99
SNRNP48-202ENST00000496946 SAP30LQ9HAJ7 183 aa2.63□□□□□ -1.99
SNRNP48-202ENST00000496946 NMRAL1Q9HBL8 299 aa2.63□□□□□ -1.99
SNRNP48-202ENST00000496946 CA10Q9NS85 328 aa2.63□□□□□ -1.99
SNRNP48-202ENST00000496946 DNAJC27Q9NZQ0 273 aa2.63□□□□□ -1.99
SNRNP48-202ENST00000496946 FLRT3Q9NZU0 649 aa2.63□□□□□ -1.99
SNRNP48-202ENST00000496946 CACFD1Q9UGQ2 172 aa2.63□□□□□ -1.99
SNRNP48-202ENST00000496946 LOXL2Q9Y4K0 774 aa2.63□□□□□ -1.99
SNRNP48-202ENST00000496946 ABCA6Q8N139 1617 aa2.63□□□□□ -1.99
SNRNP48-202ENST00000496946 PHLPP1O60346 1717 aa2.62□□□□□ -1.99
SNRNP48-202ENST00000496946 MYO5CQ9NQX4 1742 aa2.62□□□□□ -1.99
SNRNP48-202ENST00000496946 ANKRD26Q9UPS8 1709 aa2.62□□□□□ -1.99
SNRNP48-202ENST00000496946 TMEM8BA6NDV4 472 aa2.62□□□□□ -1.99
SNRNP48-202ENST00000496946 MSGN1A6NI15 193 aa2.62□□□□□ -1.99
SNRNP48-202ENST00000496946 ZNF850A8MQ14 1090 aa2.62□□□□□ -1.99
SNRNP48-202ENST00000496946 DIRC3C9JPN6 131 aa2.62□□□□□ -1.99
SNRNP48-202ENST00000496946 HLA-DQB2P05538 268 aa2.62□□□□□ -1.99
SNRNP48-202ENST00000496946 CELA2AP08217 269 aa2.62□□□□□ -1.99
SNRNP48-202ENST00000496946 SFTA3P0C7M3 94 aa2.62□□□□□ -1.99
SNRNP48-202ENST00000496946 GNB3P16520 340 aa2.62□□□□□ -1.99
SNRNP48-202ENST00000496946 CXCL3P19876 107 aa2.62□□□□□ -1.99
SNRNP48-202ENST00000496946 CSRP1P21291 193 aaKnown RBP2.62□□□□□ -1.99
SNRNP48-202ENST00000496946 GUCA1AP43080 201 aaPredicted RBP2.62□□□□□ -1.99
SNRNP48-202ENST00000496946 P2RY1P47900 373 aa2.62□□□□□ -1.99
SNRNP48-202ENST00000496946 ZNF83P51522 516 aa2.62□□□□□ -1.99
SNRNP48-202ENST00000496946 GPM6AP51674 278 aa2.62□□□□□ -1.99
SNRNP48-202ENST00000496946 CLDN6P56747 220 aa2.62□□□□□ -1.99
SNRNP48-202ENST00000496946 GRB2P62993 217 aaKnown RBP2.62□□□□□ -1.99
SNRNP48-202ENST00000496946 SLC35A1P78382 337 aa2.62□□□□□ -1.99
SNRNP48-202ENST00000496946 TIAL1Q01085 375 aaKnown RBP eCLIP2.62□□□□□ -1.99
SNRNP48-202ENST00000496946 EWSR1Q01844 656 aaKnown RBP eCLIP2.62□□□□□ -1.99
SNRNP48-202ENST00000496946 FMODQ06828 376 aa2.62□□□□□ -1.99
SNRNP48-202ENST00000496946 LY6DQ14210 128 aa2.62□□□□□ -1.99
SNRNP48-202ENST00000496946 MELKQ14680 651 aa2.62□□□□□ -1.99
SNRNP48-202ENST00000496946 EXOSC7Q15024 291 aaKnown RBP2.62□□□□□ -1.99
SNRNP48-202ENST00000496946 TMEM184AQ6ZMB5 413 aa2.62□□□□□ -1.99
SNRNP48-202ENST00000496946 FOXI2Q6ZQN5 318 aa2.62□□□□□ -1.99
SNRNP48-202ENST00000496946 LINC00471Q8N535 108 aa2.62□□□□□ -1.99
SNRNP48-202ENST00000496946 KRTCAP2Q8N6L1 136 aa2.62□□□□□ -1.99
SNRNP48-202ENST00000496946 ZNF548Q8NEK5 533 aaPredicted RBP2.62□□□□□ -1.99
SNRNP48-202ENST00000496946 ZNF555Q8NEP9 628 aa2.62□□□□□ -1.99
SNRNP48-202ENST00000496946 GJC3Q8NFK1 279 aa2.62□□□□□ -1.99
SNRNP48-202ENST00000496946 OR5AU1Q8NGC0 362 aa2.62□□□□□ -1.99
SNRNP48-202ENST00000496946 OR4B1Q8NGF8 309 aa2.62□□□□□ -1.99
SNRNP48-202ENST00000496946 OR51A4Q8NGJ6 313 aa2.62□□□□□ -1.99
SNRNP48-202ENST00000496946 OR6K6Q8NGW6 343 aa2.62□□□□□ -1.99
SNRNP48-202ENST00000496946 ZNF675Q8TD23 568 aa2.62□□□□□ -1.99
SNRNP48-202ENST00000496946 THEM6Q8WUY1 208 aa2.62□□□□□ -1.99
SNRNP48-202ENST00000496946 SECTM1Q8WVN6 248 aa2.62□□□□□ -1.99
SNRNP48-202ENST00000496946 TMED6Q8WW62 240 aa2.62□□□□□ -1.99
SNRNP48-202ENST00000496946 ZNRF4Q8WWF5 429 aa2.62□□□□□ -1.99
SNRNP48-202ENST00000496946 HIST1H2ACQ93077 130 aa2.62□□□□□ -1.99
SNRNP48-202ENST00000496946 LINC00477Q96M19 166 aa2.62□□□□□ -1.99
SNRNP48-202ENST00000496946 YPEL4Q96NS1 127 aa2.62□□□□□ -1.99
SNRNP48-202ENST00000496946 PEBP4Q96S96 227 aa2.62□□□□□ -1.99
SNRNP48-202ENST00000496946 APOBEC3GQ9HC16 384 aaKnown RBP2.62□□□□□ -1.99
SNRNP48-202ENST00000496946 MEPEQ9NQ76 525 aaPredicted RBP2.62□□□□□ -1.99
SNRNP48-202ENST00000496946 ZNF319Q9P2F9 582 aa2.62□□□□□ -1.99
SNRNP48-202ENST00000496946 CCNL1Q9UK58 526 aaPredicted RBP2.62□□□□□ -1.99
SNRNP48-202ENST00000496946 TP53TG1Q9Y2A0 90 aa2.62□□□□□ -1.99
SNRNP48-202ENST00000496946 RCL1Q9Y2P8 373 aaKnown RBP2.62□□□□□ -1.99
SNRNP48-202ENST00000496946 MAST1Q9Y2H9 1570 aa2.62□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms