RNA–Protein interactions for RNA: ENST00000496723.1

CD46-218, Transcript of CD46 molecule, humanhuman

TSL 5

Gene CD46, Length 661 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD46-218ENST00000496723 MRAP2Q96G30 205 aa1.3□□□□□ -2.2
CD46-218ENST00000496723 REEP6Q96HR9 211 aa1.3□□□□□ -2.2
CD46-218ENST00000496723 EBPLQ9BY08 206 aa1.3□□□□□ -2.2
CD46-218ENST00000496723 ARL6Q9H0F7 186 aa1.3□□□□□ -2.2
CD46-218ENST00000496723 KCNIP2Q9NS61 270 aa1.3□□□□□ -2.2
CD46-218ENST00000496723 TAS2R13Q9NYV9 303 aa1.3□□□□□ -2.2
CD46-218ENST00000496723 OR5V1Q9UGF6 321 aa1.3□□□□□ -2.2
CD46-218ENST00000496723 MRM2Q9UI43 246 aaKnown RBP1.3□□□□□ -2.2
CD46-218ENST00000496723 SNX24Q9Y343 169 aa1.3□□□□□ -2.2
CD46-218ENST00000496723 U3KQK5 164 aa1.3□□□□□ -2.2
CD46-218ENST00000496723 KIAA0232Q92628 1395 aa1.3□□□□□ -2.2
CD46-218ENST00000496723 KMT2EQ8IZD2 1858 aa1.29□□□□□ -2.2
CD46-218ENST00000496723 GOLGA8QA0A0J9YX86 632 aa1.29□□□□□ -2.2
CD46-218ENST00000496723 A0A1W2PNM2 257 aa1.29□□□□□ -2.2
CD46-218ENST00000496723 G3V3Q6 166 aa1.29□□□□□ -2.2
CD46-218ENST00000496723 TMEM250H0YL14 139 aa1.29□□□□□ -2.2
CD46-218ENST00000496723 FGF16O43320 207 aa1.29□□□□□ -2.2
CD46-218ENST00000496723 SGCEO43556 437 aa1.29□□□□□ -2.2
CD46-218ENST00000496723 CYTH3O43739 400 aa1.29□□□□□ -2.2
CD46-218ENST00000496723 IGKV1-16P04430 117 aa1.29□□□□□ -2.2
CD46-218ENST00000496723 IFI30P13284 250 aa1.29□□□□□ -2.2
CD46-218ENST00000496723 NQO2P16083 231 aa1.29□□□□□ -2.2
CD46-218ENST00000496723 RCVRNP35243 200 aa1.29□□□□□ -2.2
CD46-218ENST00000496723 SPAM1P38567 509 aa1.29□□□□□ -2.2
CD46-218ENST00000496723 INPP1P49441 399 aa1.29□□□□□ -2.2
CD46-218ENST00000496723 AQP5P55064 265 aa1.29□□□□□ -2.2
CD46-218ENST00000496723 PAFAH1B3Q15102 231 aaKnown RBP1.29□□□□□ -2.2
CD46-218ENST00000496723 Q6ZS52 159 aa1.29□□□□□ -2.2
CD46-218ENST00000496723 LYPD6Q86Y78 171 aa1.29□□□□□ -2.2
CD46-218ENST00000496723 TCAIMQ8N3R3 496 aa1.29□□□□□ -2.2
CD46-218ENST00000496723 OR4A5Q8NH83 315 aa1.29□□□□□ -2.2
CD46-218ENST00000496723 KCTD4Q8WVF5 259 aa1.29□□□□□ -2.2
CD46-218ENST00000496723 GTF2H4Q92759 462 aa1.29□□□□□ -2.2
CD46-218ENST00000496723 SERPINB11Q96P15 392 aa1.29□□□□□ -2.2
CD46-218ENST00000496723 OR8B2Q96RD0 313 aa1.29□□□□□ -2.2
CD46-218ENST00000496723 CYTH2Q99418 400 aa1.29□□□□□ -2.2
CD46-218ENST00000496723 B9D2Q9BPU9 175 aa1.29□□□□□ -2.2
CD46-218ENST00000496723 MRPL16Q9NX20 251 aaKnown RBP1.29□□□□□ -2.2
CD46-218ENST00000496723 COMMD9Q9P000 198 aa1.29□□□□□ -2.2
CD46-218ENST00000496723 TBL2Q9Y4P3 447 aaKnown RBP1.29□□□□□ -2.2
CD46-218ENST00000496723 TRPM3Q9HCF6 1732 aaPredicted RBP1.29□□□□□ -2.2
CD46-218ENST00000496723 FAM25EA8MYX2 175 aa1.28□□□□□ -2.2
CD46-218ENST00000496723 EFCAB9A8MZ26 197 aa1.28□□□□□ -2.2
CD46-218ENST00000496723 KLRC4-KLRK1H3BQV0 150 aa1.28□□□□□ -2.2
CD46-218ENST00000496723 K7ERQ8 282 aa1.28□□□□□ -2.2
CD46-218ENST00000496723 SULT1C2O00338 296 aa1.28□□□□□ -2.2
CD46-218ENST00000496723 TP53I11O14683 189 aa1.28□□□□□ -2.2
CD46-218ENST00000496723 TNFAIP8O95379 198 aa1.28□□□□□ -2.2
CD46-218ENST00000496723 SOX14O95416 240 aa1.28□□□□□ -2.2
CD46-218ENST00000496723 CSRP1P21291 193 aaKnown RBP1.28□□□□□ -2.2
CD46-218ENST00000496723 CRABP1P29762 137 aa1.28□□□□□ -2.2
CD46-218ENST00000496723 EVI2BP34910 448 aa1.28□□□□□ -2.2
CD46-218ENST00000496723 HADHBP55084 474 aaKnown RBP1.28□□□□□ -2.2
CD46-218ENST00000496723 MP68P56378 58 aa1.28□□□□□ -2.2
CD46-218ENST00000496723 RAB2AP61019 212 aa1.28□□□□□ -2.2
CD46-218ENST00000496723 RAB31Q13636 194 aa1.28□□□□□ -2.2
CD46-218ENST00000496723 APOFQ13790 326 aa1.28□□□□□ -2.2
CD46-218ENST00000496723 SYCP1Q15431 976 aa1.28□□□□□ -2.2
CD46-218ENST00000496723 TMEM249Q2WGJ8 235 aa1.28□□□□□ -2.2
CD46-218ENST00000496723 OR10J3Q5JRS4 329 aa1.28□□□□□ -2.2
CD46-218ENST00000496723 C10orf91Q5T1B1 145 aa1.28□□□□□ -2.2
CD46-218ENST00000496723 SSX7Q7RTT5 188 aa1.28□□□□□ -2.2
CD46-218ENST00000496723 KRTCAP2Q8N6L1 136 aa1.28□□□□□ -2.2
CD46-218ENST00000496723 OR11G2Q8NGC1 345 aa1.28□□□□□ -2.2
CD46-218ENST00000496723 CCDC127Q96BQ5 260 aa1.28□□□□□ -2.2
CD46-218ENST00000496723 C20orf166-AS1Q96NR2 134 aa1.28□□□□□ -2.2
CD46-218ENST00000496723 TSSK6Q9BXA6 273 aa1.28□□□□□ -2.2
CD46-218ENST00000496723 LRRC19Q9H756 370 aa1.28□□□□□ -2.2
CD46-218ENST00000496723 DMAC2Q9NW81 257 aa1.28□□□□□ -2.2
CD46-218ENST00000496723 SLC23A2Q9UGH3 650 aa1.28□□□□□ -2.2
CD46-218ENST00000496723 RPUSD1Q9UJJ7 312 aaKnown RBP1.28□□□□□ -2.2
CD46-218ENST00000496723 POFUT2Q9Y2G5 429 aa1.28□□□□□ -2.2
CD46-218ENST00000496723 PHLDA3Q9Y5J5 127 aa1.28□□□□□ -2.2
CD46-218ENST00000496723 RAB3GAP2Q9H2M9 1393 aa1.28□□□□□ -2.2
CD46-218ENST00000496723 NUP153P49790 1475 aaKnown RBP1.28□□□□□ -2.2
CD46-218ENST00000496723 PLXNA3P51805 1871 aa1.28□□□□□ -2.2
CD46-218ENST00000496723 MPDZO75970 2070 aa1.27□□□□□ -2.21
CD46-218ENST00000496723 ATG2BQ96BY7 2078 aa1.27□□□□□ -2.21
CD46-218ENST00000496723 SHANK3Q9BYB0 1731 aa1.27□□□□□ -2.21
CD46-218ENST00000496723 BRD4O60885 1362 aaPredicted RBP1.27□□□□□ -2.21
CD46-218ENST00000496723 MAP3K19Q56UN5 1328 aa1.27□□□□□ -2.21
CD46-218ENST00000496723 IGHV3OR15-7A0A075B7D8 119 aa1.27□□□□□ -2.21
CD46-218ENST00000496723 A0A1B0GTI1 187 aa1.27□□□□□ -2.21
CD46-218ENST00000496723 A0A1B0GX12 115 aa1.27□□□□□ -2.21
CD46-218ENST00000496723 PHYHO14832 338 aa1.27□□□□□ -2.21
CD46-218ENST00000496723 LECT2O14960 151 aa1.27□□□□□ -2.21
CD46-218ENST00000496723 CRTAPO75718 401 aaPredicted RBP1.27□□□□□ -2.21
CD46-218ENST00000496723 OR12D1P0DN82 309 aa1.27□□□□□ -2.21
CD46-218ENST00000496723 ZNF22P17026 224 aaPredicted RBP1.27□□□□□ -2.21
CD46-218ENST00000496723 ACTR1BP42025 376 aa1.27□□□□□ -2.21
CD46-218ENST00000496723 C1QTNF8P60827 252 aa1.27□□□□□ -2.21
CD46-218ENST00000496723 SKP2Q13309 424 aa1.27□□□□□ -2.21
CD46-218ENST00000496723 ANGPT1Q15389 498 aa1.27□□□□□ -2.21
CD46-218ENST00000496723 SPIN4Q56A73 249 aa1.27□□□□□ -2.21
CD46-218ENST00000496723 NIPAL1Q6NVV3 410 aa1.27□□□□□ -2.21
CD46-218ENST00000496723 NOXRED1Q6NXP6 359 aa1.27□□□□□ -2.21
CD46-218ENST00000496723 ZNF322Q6U7Q0 402 aaPredicted RBP1.27□□□□□ -2.21
CD46-218ENST00000496723 COPS6Q7L5N1 327 aa1.27□□□□□ -2.21
CD46-218ENST00000496723 TCF23Q7RTU1 214 aa1.27□□□□□ -2.21
CD46-218ENST00000496723 ZBTB8OSQ8IWT0 167 aa1.27□□□□□ -2.21
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms