RNA–Protein interactions for RNA: ENST00000496622.1

SSBP1-213, Transcript of single stranded DNA binding protein 1, humanhuman

TSL 1 (best)

Gene SSBP1, Length 2,620 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1-213ENST00000496622 CST4P01036 141 aa5.31□□□□□ -1.56
SSBP1-213ENST00000496622 TTRP02766 147 aa5.31□□□□□ -1.56
SSBP1-213ENST00000496622 SP1P08047 785 aa5.31□□□□□ -1.56
SSBP1-213ENST00000496622 PPIAL4FP0DN26 164 aa5.31□□□□□ -1.56
SSBP1-213ENST00000496622 CPN1P15169 458 aa5.31□□□□□ -1.56
SSBP1-213ENST00000496622 SLC6A9P48067 706 aa5.31□□□□□ -1.56
SSBP1-213ENST00000496622 MEOX1P50221 254 aa5.31□□□□□ -1.56
SSBP1-213ENST00000496622 RAB7AP51149 207 aa5.31□□□□□ -1.56
SSBP1-213ENST00000496622 FAM3AP98173 230 aa5.31□□□□□ -1.56
SSBP1-213ENST00000496622 ROM1Q03395 351 aa5.31□□□□□ -1.56
SSBP1-213ENST00000496622 HERPUD1Q15011 391 aa5.31□□□□□ -1.56
SSBP1-213ENST00000496622 HIST3H3Q16695 136 aa5.31□□□□□ -1.56
SSBP1-213ENST00000496622 RSPO1Q2MKA7 263 aaPredicted RBP5.31□□□□□ -1.56
SSBP1-213ENST00000496622 ZNF57Q68EA5 555 aaPredicted RBP5.31□□□□□ -1.56
SSBP1-213ENST00000496622 SLC25A47Q6Q0C1 308 aa5.31□□□□□ -1.56
SSBP1-213ENST00000496622 FTMTQ8N4E7 242 aa5.31□□□□□ -1.56
SSBP1-213ENST00000496622 RPS4Y2Q8TD47 263 aa5.31□□□□□ -1.56
SSBP1-213ENST00000496622 RNF133Q8WVZ7 376 aa5.31□□□□□ -1.56
SSBP1-213ENST00000496622 HPSE2Q8WWQ2 592 aa5.31□□□□□ -1.56
SSBP1-213ENST00000496622 FGGYQ96C11 551 aa5.31□□□□□ -1.56
SSBP1-213ENST00000496622 SLC25A38Q96DW6 304 aa5.31□□□□□ -1.56
SSBP1-213ENST00000496622 ADAT3Q96EY9 351 aaPredicted RBP5.31□□□□□ -1.56
SSBP1-213ENST00000496622 ADGRG7Q96K78 797 aa5.31□□□□□ -1.56
SSBP1-213ENST00000496622 ULBP2Q9BZM5 246 aa5.31□□□□□ -1.56
SSBP1-213ENST00000496622 C1orf198Q9H425 327 aa5.31□□□□□ -1.56
SSBP1-213ENST00000496622 OR2S2Q9NQN1 319 aa5.31□□□□□ -1.56
SSBP1-213ENST00000496622 C19orf73Q9NVV2 129 aa5.31□□□□□ -1.56
SSBP1-213ENST00000496622 NLKQ9UBE8 527 aa5.31□□□□□ -1.56
SSBP1-213ENST00000496622 KLK11Q9UBX7 282 aa5.31□□□□□ -1.56
SSBP1-213ENST00000496622 OR5V1Q9UGF6 321 aa5.31□□□□□ -1.56
SSBP1-213ENST00000496622 UBE2J1Q9Y385 318 aaPredicted RBP5.31□□□□□ -1.56
SSBP1-213ENST00000496622 KPTNQ9Y664 436 aa5.31□□□□□ -1.56
SSBP1-213ENST00000496622 PTPRQQ9UMZ3 2332 aa5.31□□□□□ -1.56
SSBP1-213ENST00000496622 A0A087WZY1 265 aa5.31□□□□□ -1.56
SSBP1-213ENST00000496622 TRBV5-5A0A0J9YX44 114 aa5.31□□□□□ -1.56
SSBP1-213ENST00000496622 TMEM212A6NML5 194 aa5.31□□□□□ -1.56
SSBP1-213ENST00000496622 SLC33A1O00400 549 aaPredicted RBP5.31□□□□□ -1.56
SSBP1-213ENST00000496622 ORC5O43913 435 aa5.31□□□□□ -1.56
SSBP1-213ENST00000496622 SRSF10O75494 262 aaKnown RBP5.31□□□□□ -1.56
SSBP1-213ENST00000496622 LCATP04180 440 aa5.31□□□□□ -1.56
SSBP1-213ENST00000496622 ANXA2P07355 339 aaKnown RBP5.31□□□□□ -1.56
SSBP1-213ENST00000496622 C4BPBP20851 252 aa5.31□□□□□ -1.56
SSBP1-213ENST00000496622 CHRNB4P30926 498 aa5.31□□□□□ -1.56
SSBP1-213ENST00000496622 RPL29P47914 159 aaKnown RBP5.31□□□□□ -1.56
SSBP1-213ENST00000496622 LHX2P50458 406 aa5.31□□□□□ -1.56
SSBP1-213ENST00000496622 UCP2P55851 309 aa5.31□□□□□ -1.56
SSBP1-213ENST00000496622 ATP5IP56385 69 aaPredicted RBP5.31□□□□□ -1.56
SSBP1-213ENST00000496622 ZNF121P58317 390 aaPredicted RBP5.31□□□□□ -1.56
SSBP1-213ENST00000496622 CKS1BP61024 79 aa5.31□□□□□ -1.56
SSBP1-213ENST00000496622 PPIAP62937 165 aaKnown RBP5.31□□□□□ -1.56
SSBP1-213ENST00000496622 TAF13Q15543 124 aa5.31□□□□□ -1.56
SSBP1-213ENST00000496622 PCK2Q16822 640 aa5.31□□□□□ -1.56
SSBP1-213ENST00000496622 GLYATL3Q5SZD4 288 aa5.31□□□□□ -1.56
SSBP1-213ENST00000496622 NSUN5P2Q63ZY6 315 aa5.31□□□□□ -1.56
SSBP1-213ENST00000496622 DNM1P34Q6PK57 102 aa5.31□□□□□ -1.56
SSBP1-213ENST00000496622 ASCL4Q6XD76 172 aa5.31□□□□□ -1.56
SSBP1-213ENST00000496622 FAM57BQ71RH2 274 aa5.31□□□□□ -1.56
SSBP1-213ENST00000496622 NUFIP2Q7Z417 695 aaKnown RBP5.31□□□□□ -1.56
SSBP1-213ENST00000496622 LINC01551Q86U37 167 aa5.31□□□□□ -1.56
SSBP1-213ENST00000496622 LRRTM1Q86UE6 522 aa5.31□□□□□ -1.56
SSBP1-213ENST00000496622 TMEM123Q8N131 208 aa5.31□□□□□ -1.56
SSBP1-213ENST00000496622 ZNF610Q8N9Z0 462 aa5.31□□□□□ -1.56
SSBP1-213ENST00000496622 PXT1Q8NFP0 134 aa5.31□□□□□ -1.56
SSBP1-213ENST00000496622 OR4C5Q8NGB2 326 aa5.31□□□□□ -1.56
SSBP1-213ENST00000496622 OR11H7Q8NGC8 314 aa5.31□□□□□ -1.56
SSBP1-213ENST00000496622 OR2AE1Q8NHA4 323 aa5.31□□□□□ -1.56
SSBP1-213ENST00000496622 UPRTQ96BW1 309 aa5.31□□□□□ -1.56
SSBP1-213ENST00000496622 ELMOD3Q96FG2 381 aa5.31□□□□□ -1.56
SSBP1-213ENST00000496622 ASCL2Q99929 193 aa5.31□□□□□ -1.56
SSBP1-213ENST00000496622 SOSTQ9BQB4 213 aa5.31□□□□□ -1.56
SSBP1-213ENST00000496622 FAM173AQ9BQD7 235 aa5.31□□□□□ -1.56
SSBP1-213ENST00000496622 MEGF9Q9H1U4 602 aa5.31□□□□□ -1.56
SSBP1-213ENST00000496622 PNRC2Q9NPJ4 139 aaKnown RBP5.31□□□□□ -1.56
SSBP1-213ENST00000496622 RAB22AQ9UL26 194 aa5.31□□□□□ -1.56
SSBP1-213ENST00000496622 AMDHD2Q9Y303 409 aa5.31□□□□□ -1.56
SSBP1-213ENST00000496622 TRAV1-2A0A0B4J238 106 aa5.3□□□□□ -1.56
SSBP1-213ENST00000496622 SEC14L6B5MCN3 397 aa5.3□□□□□ -1.56
SSBP1-213ENST00000496622 K7ERU9 68 aa5.3□□□□□ -1.56
SSBP1-213ENST00000496622 DHHO43323 396 aa5.3□□□□□ -1.56
SSBP1-213ENST00000496622 MT-ND4LP03901 98 aa5.3□□□□□ -1.56
SSBP1-213ENST00000496622 SCGB1A1P11684 91 aa5.3□□□□□ -1.56
SSBP1-213ENST00000496622 ZNF17P17021 662 aa5.3□□□□□ -1.56
SSBP1-213ENST00000496622 CASRP41180 1078 aa5.3□□□□□ -1.56
SSBP1-213ENST00000496622 NDUFA6P56556 154 aa5.3□□□□□ -1.56
SSBP1-213ENST00000496622 PITPNAQ00169 270 aa5.3□□□□□ -1.56
SSBP1-213ENST00000496622 HGFACQ04756 655 aa5.3□□□□□ -1.56
SSBP1-213ENST00000496622 ENDOGQ14249 297 aaKnown RBP5.3□□□□□ -1.56
SSBP1-213ENST00000496622 TAF9Q16594 264 aa5.3□□□□□ -1.56
SSBP1-213ENST00000496622 CEACAM16Q2WEN9 425 aa5.3□□□□□ -1.56
SSBP1-213ENST00000496622 KHDC3LQ587J8 217 aa5.3□□□□□ -1.56
SSBP1-213ENST00000496622 TSPO2Q5TGU0 170 aa5.3□□□□□ -1.56
SSBP1-213ENST00000496622 SFRP4Q6FHJ7 346 aaPredicted RBP5.3□□□□□ -1.56
SSBP1-213ENST00000496622 AAED1Q7RTV5 226 aa5.3□□□□□ -1.56
SSBP1-213ENST00000496622 MRPL52Q86TS9 123 aaKnown RBP5.3□□□□□ -1.56
SSBP1-213ENST00000496622 OR1K1Q8NGR3 316 aa5.3□□□□□ -1.56
SSBP1-213ENST00000496622 OR13C9Q8NGT0 318 aa5.3□□□□□ -1.56
SSBP1-213ENST00000496622 OR2AJ1Q8NGZ0 328 aa5.3□□□□□ -1.56
SSBP1-213ENST00000496622 OR4S2Q8NH73 311 aa5.3□□□□□ -1.56
SSBP1-213ENST00000496622 SYNPRQ8TBG9 265 aa5.3□□□□□ -1.56
SSBP1-213ENST00000496622 NABP1Q96AH0 204 aa5.3□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 210.3 ms