RNA–Protein interactions for RNA: ENST00000496136.5

ECHDC3-205, Transcript of enoyl-CoA hydratase domain containing 3, humanhuman

TSL 1 (best)

Gene ECHDC3, Length 1,767 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC3-205ENST00000496136 PPIAL4CA0A0B4J2A2 164 aa17.97■□□□□ 0.47
ECHDC3-205ENST00000496136 LANCL1O43813 399 aa17.97■□□□□ 0.47
ECHDC3-205ENST00000496136 ORC5O43913 435 aa17.97■□□□□ 0.47
ECHDC3-205ENST00000496136 PPIAL4GP0DN37 164 aa17.97■□□□□ 0.47
ECHDC3-205ENST00000496136 CD40LGP29965 261 aa17.97■□□□□ 0.47
ECHDC3-205ENST00000496136 PAX2Q02962 417 aa17.97■□□□□ 0.47
ECHDC3-205ENST00000496136 ZNF273Q14593 569 aa17.97■□□□□ 0.47
ECHDC3-205ENST00000496136 BAK1Q16611 211 aa17.97■□□□□ 0.47
ECHDC3-205ENST00000496136 SRSF7Q16629 238 aaKnown RBP eCLIP17.97■□□□□ 0.47
ECHDC3-205ENST00000496136 C5orf24Q7Z6I8 188 aa17.97■□□□□ 0.47
ECHDC3-205ENST00000496136 FAM185AQ8N0U4 392 aa17.97■□□□□ 0.47
ECHDC3-205ENST00000496136 C1orf159Q96HA4 380 aa17.97■□□□□ 0.47
ECHDC3-205ENST00000496136 LPAR3Q9UBY5 353 aa17.97■□□□□ 0.47
ECHDC3-205ENST00000496136 RBMX2Q9Y388 322 aaKnown RBP17.97■□□□□ 0.47
ECHDC3-205ENST00000496136 J3QRK9 145 aa17.96■□□□□ 0.47
ECHDC3-205ENST00000496136 GLP1RP43220 463 aa17.96■□□□□ 0.47
ECHDC3-205ENST00000496136 DACT3Q96B18 629 aaPredicted RBP17.96■□□□□ 0.47
ECHDC3-205ENST00000496136 LPAR2Q9HBW0 351 aa17.96■□□□□ 0.47
ECHDC3-205ENST00000496136 IFT46Q9NQC8 304 aa17.96■□□□□ 0.47
ECHDC3-205ENST00000496136 MMP26Q9NRE1 261 aa17.96■□□□□ 0.47
ECHDC3-205ENST00000496136 ANAPC10Q9UM13 185 aa17.96■□□□□ 0.47
ECHDC3-205ENST00000496136 UBE2J1Q9Y385 318 aaPredicted RBP17.96■□□□□ 0.47
ECHDC3-205ENST00000496136 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP17.96■□□□□ 0.47
ECHDC3-205ENST00000496136 A0A1W2PQ09 198 aa17.96■□□□□ 0.47
ECHDC3-205ENST00000496136 Q6ZS49 121 aa17.96■□□□□ 0.47
ECHDC3-205ENST00000496136 MOB1BQ7L9L4 216 aa17.96■□□□□ 0.47
ECHDC3-205ENST00000496136 LYSMD2Q8IV50 215 aa17.96■□□□□ 0.47
ECHDC3-205ENST00000496136 CIARTQ8N365 385 aaPredicted RBP17.96■□□□□ 0.47
ECHDC3-205ENST00000496136 BEST4Q8NFU0 473 aa17.96■□□□□ 0.47
ECHDC3-205ENST00000496136 TAF9BQ9HBM6 251 aa17.96■□□□□ 0.47
ECHDC3-205ENST00000496136 KCNIP1Q9NZI2 227 aa17.96■□□□□ 0.47
ECHDC3-205ENST00000496136 C12orf77C9JDV5 145 aa17.95■□□□□ 0.46
ECHDC3-205ENST00000496136 CCL3L1P16619 93 aa17.95■□□□□ 0.46
ECHDC3-205ENST00000496136 NAT1P18440 290 aa17.95■□□□□ 0.46
ECHDC3-205ENST00000496136 C6orf183Q5T699 404 aa17.95■□□□□ 0.46
ECHDC3-205ENST00000496136 OR52W1Q6IF63 320 aa17.95■□□□□ 0.46
ECHDC3-205ENST00000496136 SNAPC3Q92966 411 aa17.95■□□□□ 0.46
ECHDC3-205ENST00000496136 AKAP9Q99996 3911 aa17.95■□□□□ 0.46
ECHDC3-205ENST00000496136 TAS2R3Q9NYW6 316 aa17.95■□□□□ 0.46
ECHDC3-205ENST00000496136 MGAT4AQ9UM21 535 aa17.95■□□□□ 0.46
ECHDC3-205ENST00000496136 KIR2DS1A0A191URI9 304 aa17.94■□□□□ 0.46
ECHDC3-205ENST00000496136 B4DSR2 109 aa17.94■□□□□ 0.46
ECHDC3-205ENST00000496136 TRDCB7Z8K6 153 aa17.94■□□□□ 0.46
ECHDC3-205ENST00000496136 C15orf65H3BRN8 121 aa17.94■□□□□ 0.46
ECHDC3-205ENST00000496136 LIPFP07098 398 aa17.94■□□□□ 0.46
ECHDC3-205ENST00000496136 SCTP09683 121 aa17.94■□□□□ 0.46
ECHDC3-205ENST00000496136 SSTR5P35346 364 aa17.94■□□□□ 0.46
ECHDC3-205ENST00000496136 GDNFP39905 211 aa17.94■□□□□ 0.46
ECHDC3-205ENST00000496136 ACTBP60709 375 aa17.94■□□□□ 0.46
ECHDC3-205ENST00000496136 ACTG1P63261 375 aa17.94■□□□□ 0.46
ECHDC3-205ENST00000496136 SSBP1Q04837 148 aaKnown RBP17.94■□□□□ 0.46
ECHDC3-205ENST00000496136 C17orf58Q2M2W7 97 aa17.94■□□□□ 0.46
ECHDC3-205ENST00000496136 ZNF554Q86TJ5 538 aa17.94■□□□□ 0.46
ECHDC3-205ENST00000496136 RFESDQ8TAC1 157 aa17.94■□□□□ 0.46
ECHDC3-205ENST00000496136 TRIM63Q969Q1 353 aa17.94■□□□□ 0.46
ECHDC3-205ENST00000496136 ARL11Q969Q4 196 aa17.94■□□□□ 0.46
ECHDC3-205ENST00000496136 ZNF286AQ9HBT8 521 aa17.94■□□□□ 0.46
ECHDC3-205ENST00000496136 FLNAP21333 2647 aaKnown RBP17.94■□□□□ 0.46
ECHDC3-205ENST00000496136 ZNF469Q96JG9 3925 aaPredicted RBP17.94■□□□□ 0.46
ECHDC3-205ENST00000496136 KBTBD11-OT1A0A1B0GTJ5 212 aa17.94■□□□□ 0.46
ECHDC3-205ENST00000496136 GSTT2P0CG29 244 aa17.94■□□□□ 0.46
ECHDC3-205ENST00000496136 GSTT2BP0CG30 244 aa17.94■□□□□ 0.46
ECHDC3-205ENST00000496136 ZNF728P0DKX0 622 aa17.94■□□□□ 0.46
ECHDC3-205ENST00000496136 HMGN3Q15651 99 aa17.94■□□□□ 0.46
ECHDC3-205ENST00000496136 TMEM249Q2WGJ8 235 aa17.94■□□□□ 0.46
ECHDC3-205ENST00000496136 TRAT1Q6PIZ9 186 aa17.94■□□□□ 0.46
ECHDC3-205ENST00000496136 PRR18Q8N4B5 295 aa17.94■□□□□ 0.46
ECHDC3-205ENST00000496136 C11orf42Q8N5U0 333 aa17.94■□□□□ 0.46
ECHDC3-205ENST00000496136 UBALD1Q8TB05 177 aa17.94■□□□□ 0.46
ECHDC3-205ENST00000496136 DMRTB1Q96MA1 342 aa17.94■□□□□ 0.46
ECHDC3-205ENST00000496136 ZNF714Q96N38 554 aa17.94■□□□□ 0.46
ECHDC3-205ENST00000496136 CALYQ9NYX4 217 aa17.94■□□□□ 0.46
ECHDC3-205ENST00000496136 OPN4Q9UHM6 478 aa17.94■□□□□ 0.46
ECHDC3-205ENST00000496136 ANXA10Q9UJ72 324 aa17.94■□□□□ 0.46
ECHDC3-205ENST00000496136 ABCA1O95477 2261 aa17.93■□□□□ 0.46
ECHDC3-205ENST00000496136 ZANQ9Y493 2812 aa17.93■□□□□ 0.46
ECHDC3-205ENST00000496136 IGHV2-70DA0A0C4DH43 119 aa17.93■□□□□ 0.46
ECHDC3-205ENST00000496136 ZNF729A6NN14 1252 aaPredicted RBP17.93■□□□□ 0.46
ECHDC3-205ENST00000496136 ENSAO43768 121 aaKnown RBP17.93■□□□□ 0.46
ECHDC3-205ENST00000496136 MSMBP08118 114 aa17.93■□□□□ 0.46
ECHDC3-205ENST00000496136 RCVRNP35243 200 aa17.93■□□□□ 0.46
ECHDC3-205ENST00000496136 KIR2DS4P43632 304 aa17.93■□□□□ 0.46
ECHDC3-205ENST00000496136 DLX6P56179 175 aa17.93■□□□□ 0.46
ECHDC3-205ENST00000496136 KIR2DS1Q14954 304 aa17.93■□□□□ 0.46
ECHDC3-205ENST00000496136 CCDC32Q9BV29 185 aa17.93■□□□□ 0.46
ECHDC3-205ENST00000496136 LINC00574Q9H8X3 128 aa17.93■□□□□ 0.46
ECHDC3-205ENST00000496136 NPIPB11E5RHQ5 1161 aa17.92■□□□□ 0.46
ECHDC3-205ENST00000496136 FABP7O15540 132 aa17.92■□□□□ 0.46
ECHDC3-205ENST00000496136 HBZP02008 142 aa17.92■□□□□ 0.46
ECHDC3-205ENST00000496136 IL7P13232 177 aa17.92■□□□□ 0.46
ECHDC3-205ENST00000496136 HLA-DMAP28067 261 aa17.92■□□□□ 0.46
ECHDC3-205ENST00000496136 ERVFRD-1P60508 538 aa17.92■□□□□ 0.46
ECHDC3-205ENST00000496136 HLA-DRB3P79483 266 aa17.92■□□□□ 0.46
ECHDC3-205ENST00000496136 LINC01356Q8N9X3 169 aa17.92■□□□□ 0.46
ECHDC3-205ENST00000496136 OR1L1Q8NH94 360 aa17.92■□□□□ 0.46
ECHDC3-205ENST00000496136 MSI2Q96DH6 328 aaKnown RBP17.92■□□□□ 0.46
ECHDC3-205ENST00000496136 GAL3ST2Q9H3Q3 398 aa17.92■□□□□ 0.46
ECHDC3-205ENST00000496136 A0A1W2PPH5 198 aa17.91■□□□□ 0.46
ECHDC3-205ENST00000496136 IGHV4-31P0DP07 118 aa17.91■□□□□ 0.46
ECHDC3-205ENST00000496136 OMGP23515 440 aa17.91■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 69 ms