RNA–Protein interactions for RNA: ENST00000496116.1

CMSS1-208, Transcript of cms1 ribosomal small subunit homolog (yeast), humanhuman

TSL 1 (best)

Gene CMSS1, Length 2,145 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMSS1-208ENST00000496116 TMEM210A6NLX4 147 aa9.41□□□□□ -0.9
CMSS1-208ENST00000496116 NPIPB11E5RHQ5 1161 aa9.41□□□□□ -0.9
CMSS1-208ENST00000496116 RNASEK-C17orf49H0YIS7 233 aa9.41□□□□□ -0.9
CMSS1-208ENST00000496116 TRIM77I1YAP6 450 aa9.41□□□□□ -0.9
CMSS1-208ENST00000496116 OR2H2O95918 312 aa9.41□□□□□ -0.9
CMSS1-208ENST00000496116 DANCRP0C864 163 aa9.41□□□□□ -0.9
CMSS1-208ENST00000496116 MUC1P15941 1255 aaPredicted RBP9.41□□□□□ -0.9
CMSS1-208ENST00000496116 F2RP25116 425 aa9.41□□□□□ -0.9
CMSS1-208ENST00000496116 ERVK11-1P61568 191 aa9.41□□□□□ -0.9
CMSS1-208ENST00000496116 EWSR1Q01844 656 aaKnown RBP eCLIP9.41□□□□□ -0.9
CMSS1-208ENST00000496116 GUCA2BQ16661 112 aa9.41□□□□□ -0.9
CMSS1-208ENST00000496116 NMSQ5H8A3 153 aa9.41□□□□□ -0.9
CMSS1-208ENST00000496116 ZNF324BQ6AW86 544 aaPredicted RBP9.41□□□□□ -0.9
CMSS1-208ENST00000496116 COMMD1Q8N668 190 aa9.41□□□□□ -0.9
CMSS1-208ENST00000496116 CLRN3Q8NCR9 226 aa9.41□□□□□ -0.9
CMSS1-208ENST00000496116 LYPD6BQ8NI32 183 aa9.41□□□□□ -0.9
CMSS1-208ENST00000496116 IL1F10Q8WWZ1 152 aa9.41□□□□□ -0.9
CMSS1-208ENST00000496116 PLEKHF2Q9H8W4 249 aa9.41□□□□□ -0.9
CMSS1-208ENST00000496116 TRAPPC2LQ9UL33 140 aa9.41□□□□□ -0.9
CMSS1-208ENST00000496116 FAM74A7A6NL05 159 aa9.4□□□□□ -0.9
CMSS1-208ENST00000496116 SIRPB1O00241 398 aa9.4□□□□□ -0.9
CMSS1-208ENST00000496116 WRBO00258 174 aa9.4□□□□□ -0.9
CMSS1-208ENST00000496116 TOR1AO14656 332 aa9.4□□□□□ -0.9
CMSS1-208ENST00000496116 CDIPTO14735 213 aa9.4□□□□□ -0.9
CMSS1-208ENST00000496116 SH2D1BO14796 132 aa9.4□□□□□ -0.9
CMSS1-208ENST00000496116 TNFSF12O43508 249 aa9.4□□□□□ -0.9
CMSS1-208ENST00000496116 SSSCA1O60232 199 aa9.4□□□□□ -0.9
CMSS1-208ENST00000496116 NXPH2O95156 264 aa9.4□□□□□ -0.9
CMSS1-208ENST00000496116 TSPAN15O95858 294 aa9.4□□□□□ -0.9
CMSS1-208ENST00000496116 PGA5P0DJD9 388 aa9.4□□□□□ -0.9
CMSS1-208ENST00000496116 MMP9P14780 707 aa9.4□□□□□ -0.9
CMSS1-208ENST00000496116 CBR1P16152 277 aa9.4□□□□□ -0.9
CMSS1-208ENST00000496116 DVL1P1P54792 670 aaPredicted RBP9.4□□□□□ -0.9
CMSS1-208ENST00000496116 ERVS71-1P61550 626 aa9.4□□□□□ -0.9
CMSS1-208ENST00000496116 POLR2GP62487 172 aaKnown RBP eCLIP9.4□□□□□ -0.9
CMSS1-208ENST00000496116 ZNF154Q13106 437 aa9.4□□□□□ -0.9
CMSS1-208ENST00000496116 ZNF146Q15072 292 aa9.4□□□□□ -0.9
CMSS1-208ENST00000496116 GUSBP1Q15486 140 aa9.4□□□□□ -0.9
CMSS1-208ENST00000496116 OR8G1Q15617 311 aa9.4□□□□□ -0.9
CMSS1-208ENST00000496116 FAM74A3Q4VXF1 159 aa9.4□□□□□ -0.9
CMSS1-208ENST00000496116 WDR86Q86TI4 376 aa9.4□□□□□ -0.9
CMSS1-208ENST00000496116 C1orf162Q8NEQ5 155 aaPredicted RBP9.4□□□□□ -0.9
CMSS1-208ENST00000496116 OR10V1Q8NGI7 309 aa9.4□□□□□ -0.9
CMSS1-208ENST00000496116 LILRB1Q8NHL6 650 aaPredicted RBP9.4□□□□□ -0.9
CMSS1-208ENST00000496116 BSCL2Q96G97 398 aaPredicted RBP9.4□□□□□ -0.9
CMSS1-208ENST00000496116 TLNRD1Q9H1K6 362 aa9.4□□□□□ -0.9
CMSS1-208ENST00000496116 WFDC1Q9HC57 220 aa9.4□□□□□ -0.9
CMSS1-208ENST00000496116 LYRM2Q9NU23 88 aaPredicted RBP9.4□□□□□ -0.9
CMSS1-208ENST00000496116 PLA2G2EQ9NZK7 142 aa9.4□□□□□ -0.9
CMSS1-208ENST00000496116 ERRFI1Q9UJM3 462 aaPredicted RBP9.4□□□□□ -0.9
CMSS1-208ENST00000496116 FAM96BQ9Y3D0 163 aa9.4□□□□□ -0.9
CMSS1-208ENST00000496116 STRAPQ9Y3F4 350 aaKnown RBP9.4□□□□□ -0.9
CMSS1-208ENST00000496116 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP9.4□□□□□ -0.91
CMSS1-208ENST00000496116 SLC33A1O00400 549 aaPredicted RBP9.4□□□□□ -0.91
CMSS1-208ENST00000496116 AGPAT2O15120 278 aa9.4□□□□□ -0.91
CMSS1-208ENST00000496116 CD5P06127 495 aa9.4□□□□□ -0.91
CMSS1-208ENST00000496116 SERPINE2P07093 398 aa9.4□□□□□ -0.91
CMSS1-208ENST00000496116 SFTA3P0C7M3 94 aa9.4□□□□□ -0.91
CMSS1-208ENST00000496116 CAMLGP49069 296 aa9.4□□□□□ -0.91
CMSS1-208ENST00000496116 SRSF6Q13247 344 aaKnown RBP9.4□□□□□ -0.91
CMSS1-208ENST00000496116 ZNF497Q6ZNH5 498 aa9.4□□□□□ -0.91
CMSS1-208ENST00000496116 WNT2BQ93097 391 aa9.4□□□□□ -0.91
CMSS1-208ENST00000496116 AKR1E2Q96JD6 320 aa9.4□□□□□ -0.91
CMSS1-208ENST00000496116 C11orf1Q9H5F2 150 aa9.4□□□□□ -0.91
CMSS1-208ENST00000496116 PARD6AQ9NPB6 346 aa9.4□□□□□ -0.91
CMSS1-208ENST00000496116 PURGQ9UJV8 347 aaKnown RBP9.4□□□□□ -0.91
CMSS1-208ENST00000496116 FAM24AA6NFZ4 105 aa9.39□□□□□ -0.91
CMSS1-208ENST00000496116 HSPA12AO43301 675 aa9.39□□□□□ -0.91
CMSS1-208ENST00000496116 PITX3O75364 302 aa9.39□□□□□ -0.91
CMSS1-208ENST00000496116 IGKV3-15P01624 115 aa9.39□□□□□ -0.91
CMSS1-208ENST00000496116 PRH1P02810 166 aa9.39□□□□□ -0.91
CMSS1-208ENST00000496116 WNT2P09544 360 aa9.39□□□□□ -0.91
CMSS1-208ENST00000496116 COX5AP20674 150 aa9.39□□□□□ -0.91
CMSS1-208ENST00000496116 TUBG1P23258 451 aa9.39□□□□□ -0.91
CMSS1-208ENST00000496116 CD80P33681 288 aa9.39□□□□□ -0.91
CMSS1-208ENST00000496116 ID3Q02535 119 aa9.39□□□□□ -0.91
CMSS1-208ENST00000496116 BAXQ07812 192 aa9.39□□□□□ -0.91
CMSS1-208ENST00000496116 ZNF616Q08AN1 781 aa9.39□□□□□ -0.91
CMSS1-208ENST00000496116 PSG7Q13046 419 aa9.39□□□□□ -0.91
CMSS1-208ENST00000496116 HSD17B11Q8NBQ5 300 aa9.39□□□□□ -0.91
CMSS1-208ENST00000496116 KLF14Q8TD94 323 aaPredicted RBP9.39□□□□□ -0.91
CMSS1-208ENST00000496116 GPHA2Q96T91 129 aa9.39□□□□□ -0.91
CMSS1-208ENST00000496116 OBP2BQ9NPH6 170 aa9.39□□□□□ -0.91
CMSS1-208ENST00000496116 TUBG2Q9NRH3 451 aa9.39□□□□□ -0.91
CMSS1-208ENST00000496116 TAAR3PQ9P1P4 343 aa9.39□□□□□ -0.91
CMSS1-208ENST00000496116 RBM7Q9Y580 266 aaKnown RBP9.39□□□□□ -0.91
CMSS1-208ENST00000496116 PRR33A8MZF0 331 aa9.38□□□□□ -0.91
CMSS1-208ENST00000496116 GRPP07492 148 aa9.38□□□□□ -0.91
CMSS1-208ENST00000496116 ACAA1P09110 424 aaPredicted RBP9.38□□□□□ -0.91
CMSS1-208ENST00000496116 OR8U9P0C7N5 309 aa9.38□□□□□ -0.91
CMSS1-208ENST00000496116 KIR2DL2P43627 348 aaPredicted RBP9.38□□□□□ -0.91
CMSS1-208ENST00000496116 IGFBP7Q16270 282 aa9.38□□□□□ -0.91
CMSS1-208ENST00000496116 MIDNQ504T8 468 aa9.38□□□□□ -0.91
CMSS1-208ENST00000496116 CXorf66Q5JRM2 361 aaPredicted RBP9.38□□□□□ -0.91
CMSS1-208ENST00000496116 FAM122CQ6P4D5 195 aa9.38□□□□□ -0.91
CMSS1-208ENST00000496116 IGF2-ASQ6U949 168 aa9.38□□□□□ -0.91
CMSS1-208ENST00000496116 PRR18Q8N4B5 295 aa9.38□□□□□ -0.91
CMSS1-208ENST00000496116 TMEM252Q8N6L7 170 aa9.38□□□□□ -0.91
CMSS1-208ENST00000496116 OR8U1Q8NH10 309 aa9.38□□□□□ -0.91
CMSS1-208ENST00000496116 OR51H1Q8NH63 302 aa9.38□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms