RNA–Protein interactions for RNA: ENST00000495122.1

CBX4-204, Transcript of chromobox 4, humanhuman

TSL 3

Gene CBX4, Length 490 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX4-204ENST00000495122 SRPXP78539 464 aa13.74□□□□□ -0.21
CBX4-204ENST00000495122 OPCMLQ14982 345 aa13.74□□□□□ -0.21
CBX4-204ENST00000495122 ESCO2Q56NI9 601 aa13.74□□□□□ -0.21
CBX4-204ENST00000495122 C11orf87Q6NUJ2 197 aa13.74□□□□□ -0.21
CBX4-204ENST00000495122 FAM90A1Q86YD7 464 aa13.74□□□□□ -0.21
CBX4-204ENST00000495122 LRTM2Q8N967 370 aa13.74□□□□□ -0.21
CBX4-204ENST00000495122 OR8H1Q8NGG4 311 aa13.74□□□□□ -0.21
CBX4-204ENST00000495122 MRPL30Q8TCC3 161 aaKnown RBP13.74□□□□□ -0.21
CBX4-204ENST00000495122 FOXC2Q99958 501 aa13.74□□□□□ -0.21
CBX4-204ENST00000495122 CABLES2Q9BTV7 478 aa13.74□□□□□ -0.21
CBX4-204ENST00000495122 RSRP1Q9BUV0 290 aa13.74□□□□□ -0.21
CBX4-204ENST00000495122 NF1P21359 2839 aa13.74□□□□□ -0.21
CBX4-204ENST00000495122 FXYD6-FXYD2A0A087WZ82 144 aa13.73□□□□□ -0.21
CBX4-204ENST00000495122 TRAV24A0A0B4J272 114 aa13.73□□□□□ -0.21
CBX4-204ENST00000495122 TEX13DA0A0J9YY54 714 aaPredicted RBP13.73□□□□□ -0.21
CBX4-204ENST00000495122 IFNL4K9M1U5 179 aa13.73□□□□□ -0.21
CBX4-204ENST00000495122 MLNRO43193 412 aa13.73□□□□□ -0.21
CBX4-204ENST00000495122 B3GALNT1O75752 331 aa13.73□□□□□ -0.21
CBX4-204ENST00000495122 GLRA1P23415 457 aa13.73□□□□□ -0.21
CBX4-204ENST00000495122 LMO1P25800 156 aa13.73□□□□□ -0.21
CBX4-204ENST00000495122 CFHR2P36980 270 aa13.73□□□□□ -0.21
CBX4-204ENST00000495122 NKX6-1P78426 367 aaPredicted RBP13.73□□□□□ -0.21
CBX4-204ENST00000495122 KCTD9Q7L273 389 aa13.73□□□□□ -0.21
CBX4-204ENST00000495122 LILRB1Q8NHL6 650 aaPredicted RBP13.73□□□□□ -0.21
CBX4-204ENST00000495122 THAP6Q8TBB0 222 aa13.73□□□□□ -0.21
CBX4-204ENST00000495122 C1QTNF6Q9BXI9 259 aa13.73□□□□□ -0.21
CBX4-204ENST00000495122 NAA60Q9H7X0 242 aa13.73□□□□□ -0.21
CBX4-204ENST00000495122 MAB21L2Q9Y586 359 aa13.73□□□□□ -0.21
CBX4-204ENST00000495122 MTORP42345 2549 aa13.73□□□□□ -0.21
CBX4-204ENST00000495122 ACANP16112 2415 aa13.72□□□□□ -0.21
CBX4-204ENST00000495122 TRBV6-7A0A0A0MS04 114 aa13.72□□□□□ -0.21
CBX4-204ENST00000495122 TRAV14DV4A0A0A6YYC5 116 aa13.72□□□□□ -0.21
CBX4-204ENST00000495122 C5orf51A6NDU8 294 aa13.72□□□□□ -0.21
CBX4-204ENST00000495122 RP2O75695 350 aa13.72□□□□□ -0.21
CBX4-204ENST00000495122 RHBDL1O75783 438 aa13.72□□□□□ -0.21
CBX4-204ENST00000495122 TUSC2O75896 110 aa13.72□□□□□ -0.21
CBX4-204ENST00000495122 GOSR1O95249 250 aa13.72□□□□□ -0.21
CBX4-204ENST00000495122 KNG1P01042 644 aa13.72□□□□□ -0.21
CBX4-204ENST00000495122 PPYP01298 95 aa13.72□□□□□ -0.21
CBX4-204ENST00000495122 IFNA21P01568 189 aa13.72□□□□□ -0.21
CBX4-204ENST00000495122 ZNF44P15621 663 aa13.72□□□□□ -0.21
CBX4-204ENST00000495122 CXCL2P19875 107 aa13.72□□□□□ -0.21
CBX4-204ENST00000495122 PSMB6P28072 239 aa13.72□□□□□ -0.21
CBX4-204ENST00000495122 SERPINF1P36955 418 aa13.72□□□□□ -0.21
CBX4-204ENST00000495122 SELENOVP59797 346 aa13.72□□□□□ -0.21
CBX4-204ENST00000495122 HLA-DRB3P79483 266 aa13.72□□□□□ -0.21
CBX4-204ENST00000495122 PAX5Q02548 391 aa13.72□□□□□ -0.21
CBX4-204ENST00000495122 BAMBIQ13145 260 aa13.72□□□□□ -0.21
CBX4-204ENST00000495122 ALKBH6Q3KRA9 238 aa13.72□□□□□ -0.21
CBX4-204ENST00000495122 PAN3Q58A45 887 aaKnown RBP13.72□□□□□ -0.21
CBX4-204ENST00000495122 TMUB2Q71RG4 321 aa13.72□□□□□ -0.21
CBX4-204ENST00000495122 ZNF680Q8NEM1 530 aa13.72□□□□□ -0.21
CBX4-204ENST00000495122 LINC01560Q8TB33 94 aa13.72□□□□□ -0.21
CBX4-204ENST00000495122 PPP1R1CQ8WVI7 109 aa13.72□□□□□ -0.21
CBX4-204ENST00000495122 DYRK2Q92630 601 aa13.72□□□□□ -0.21
CBX4-204ENST00000495122 C2orf50Q96LR7 162 aa13.72□□□□□ -0.21
CBX4-204ENST00000495122 MFFQ9GZY8 342 aa13.72□□□□□ -0.21
CBX4-204ENST00000495122 ZFP57Q9NU63 452 aa13.72□□□□□ -0.21
CBX4-204ENST00000495122 UBQLN2Q9UHD9 624 aa13.72□□□□□ -0.21
CBX4-204ENST00000495122 TNFSF18Q9UNG2 199 aa13.72□□□□□ -0.21
CBX4-204ENST00000495122 ZFHX3Q15911 3703 aa13.72□□□□□ -0.21
CBX4-204ENST00000495122 IGLV3-9A0A075B6K5 115 aa13.71□□□□□ -0.21
CBX4-204ENST00000495122 M0R1B8 84 aa13.71□□□□□ -0.21
CBX4-204ENST00000495122 SLC33A1O00400 549 aaPredicted RBP13.71□□□□□ -0.21
CBX4-204ENST00000495122 CDIPTO14735 213 aa13.71□□□□□ -0.21
CBX4-204ENST00000495122 ARPC5O15511 151 aa13.71□□□□□ -0.21
CBX4-204ENST00000495122 TSC22D2O75157 780 aa13.71□□□□□ -0.21
CBX4-204ENST00000495122 WNT2P09544 360 aa13.71□□□□□ -0.21
CBX4-204ENST00000495122 S100GP29377 79 aa13.71□□□□□ -0.21
CBX4-204ENST00000495122 ZNF83P51522 516 aa13.71□□□□□ -0.21
CBX4-204ENST00000495122 PIGPP57054 158 aa13.71□□□□□ -0.21
CBX4-204ENST00000495122 KLF3P57682 345 aaPredicted RBP13.71□□□□□ -0.21
CBX4-204ENST00000495122 SLC9A3R2Q15599 337 aa13.71□□□□□ -0.21
CBX4-204ENST00000495122 SMIM21Q3B7S5 101 aa13.71□□□□□ -0.21
CBX4-204ENST00000495122 ANKRD55Q3KP44 614 aa13.71□□□□□ -0.21
CBX4-204ENST00000495122 BRICD5Q6PL45 260 aa13.71□□□□□ -0.21
CBX4-204ENST00000495122 ZNF497Q6ZNH5 498 aa13.71□□□□□ -0.21
CBX4-204ENST00000495122 Q6ZPA2 131 aa13.71□□□□□ -0.21
CBX4-204ENST00000495122 ZNF546Q86UE3 836 aa13.71□□□□□ -0.21
CBX4-204ENST00000495122 NUP37Q8NFH4 326 aa13.71□□□□□ -0.21
CBX4-204ENST00000495122 WDR89Q96FK6 387 aaPredicted RBP13.71□□□□□ -0.21
CBX4-204ENST00000495122 CYYR1Q96J86 154 aa13.71□□□□□ -0.21
CBX4-204ENST00000495122 ZNF488Q96MN9 340 aa13.71□□□□□ -0.21
CBX4-204ENST00000495122 HS3ST6Q96QI5 342 aa13.71□□□□□ -0.21
CBX4-204ENST00000495122 TMEM165Q9HC07 324 aa13.71□□□□□ -0.21
CBX4-204ENST00000495122 IL36RNQ9UBH0 155 aa13.71□□□□□ -0.21
CBX4-204ENST00000495122 FBXO9Q9UK97 447 aaPredicted RBP13.71□□□□□ -0.21
CBX4-204ENST00000495122 PRR14LQ5THK1 2151 aa13.71□□□□□ -0.22
CBX4-204ENST00000495122 DUXBA0A1W2PPF3 345 aa13.7□□□□□ -0.22
CBX4-204ENST00000495122 C16orf97H3BN30 126 aa13.7□□□□□ -0.22
CBX4-204ENST00000495122 MPC2O95563 127 aa13.7□□□□□ -0.22
CBX4-204ENST00000495122 OR2H2O95918 312 aa13.7□□□□□ -0.22
CBX4-204ENST00000495122 LYL1P12980 280 aa13.7□□□□□ -0.22
CBX4-204ENST00000495122 AADACP22760 399 aa13.7□□□□□ -0.22
CBX4-204ENST00000495122 FABP6P51161 128 aa13.7□□□□□ -0.22
CBX4-204ENST00000495122 PDCD1Q15116 288 aa13.7□□□□□ -0.22
CBX4-204ENST00000495122 ACOT7LQ6ZUV0 252 aa13.7□□□□□ -0.22
CBX4-204ENST00000495122 SLC51BQ86UW2 128 aa13.7□□□□□ -0.22
CBX4-204ENST00000495122 KCNRGQ8N5I3 272 aa13.7□□□□□ -0.22
CBX4-204ENST00000495122 RTN4IP1Q8WWV3 396 aaPredicted RBP13.7□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 75.1 ms