RNA–Protein interactions for RNA: ENST00000494090.6

COL27A1-207, Transcript of collagen type XXVII alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL27A1, Length 5,329 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-207ENST00000494090 NPTNQ9Y639 398 aa16.74■□□□□ 0.27
COL27A1-207ENST00000494090 ELOA3CA0A087WX78 387 aaPredicted RBP16.73■□□□□ 0.27
COL27A1-207ENST00000494090 ADAM11O75078 769 aa16.73■□□□□ 0.27
COL27A1-207ENST00000494090 ABHD3Q8WU67 409 aa16.73■□□□□ 0.27
COL27A1-207ENST00000494090 GHITMQ9H3K2 345 aa16.73■□□□□ 0.27
COL27A1-207ENST00000494090 DOK5Q9P104 306 aa16.73■□□□□ 0.27
COL27A1-207ENST00000494090 ZFC3H1O60293 1989 aaKnown RBP16.73■□□□□ 0.27
COL27A1-207ENST00000494090 RPL36A-HNRNPH2H7BZ11 118 aa16.73■□□□□ 0.27
COL27A1-207ENST00000494090 SULT1A1P50225 295 aa16.73■□□□□ 0.27
COL27A1-207ENST00000494090 C3AR1Q16581 482 aa16.73■□□□□ 0.27
COL27A1-207ENST00000494090 RNF151Q2KHN1 245 aa16.73■□□□□ 0.27
COL27A1-207ENST00000494090 PRSS53Q2L4Q9 553 aa16.73■□□□□ 0.27
COL27A1-207ENST00000494090 RFLNBQ8N5W9 214 aa16.73■□□□□ 0.27
COL27A1-207ENST00000494090 TEX29Q8N6K0 151 aa16.73■□□□□ 0.27
COL27A1-207ENST00000494090 ANAPC16Q96DE5 110 aa16.73■□□□□ 0.27
COL27A1-207ENST00000494090 IFI6P09912 130 aa16.73■□□□□ 0.27
COL27A1-207ENST00000494090 NHLH1Q02575 133 aa16.73■□□□□ 0.27
COL27A1-207ENST00000494090 NHLH2Q02577 135 aa16.73■□□□□ 0.27
COL27A1-207ENST00000494090 C1orf185Q5T7R7 199 aa16.73■□□□□ 0.27
COL27A1-207ENST00000494090 FAM78BQ5VT40 261 aa16.73■□□□□ 0.27
COL27A1-207ENST00000494090 WDR31Q8NA23 367 aa16.73■□□□□ 0.27
COL27A1-207ENST00000494090 NAGKQ9UJ70 344 aa16.73■□□□□ 0.27
COL27A1-207ENST00000494090 OR2W1Q9Y3N9 320 aa16.73■□□□□ 0.27
COL27A1-207ENST00000494090 TRBV5-5A0A0J9YX44 114 aa16.73■□□□□ 0.27
COL27A1-207ENST00000494090 SEC11BP0C7V7 166 aa16.73■□□□□ 0.27
COL27A1-207ENST00000494090 CD200R1LQ6Q8B3 271 aa16.73■□□□□ 0.27
COL27A1-207ENST00000494090 LYZL2Q7Z4W2 148 aa16.73■□□□□ 0.27
COL27A1-207ENST00000494090 MS4A10Q96PG2 267 aa16.73■□□□□ 0.27
COL27A1-207ENST00000494090 USF1P22415 310 aaPredicted RBP16.72■□□□□ 0.27
COL27A1-207ENST00000494090 PIGYQ3MUY2 71 aa16.72■□□□□ 0.27
COL27A1-207ENST00000494090 RGPD4Q7Z3J3 1758 aa16.72■□□□□ 0.27
COL27A1-207ENST00000494090 MFNGO00587 321 aa16.72■□□□□ 0.27
COL27A1-207ENST00000494090 NEURL1O76050 574 aa16.72■□□□□ 0.27
COL27A1-207ENST00000494090 MIA3Q5JRA6 1907 aa16.72■□□□□ 0.27
COL27A1-207ENST00000494090 A0A1B0GU03 582 aa16.72■□□□□ 0.27
COL27A1-207ENST00000494090 KIAA1324LA8MWY0 1029 aaPredicted RBP16.72■□□□□ 0.27
COL27A1-207ENST00000494090 LYRM7Q5U5X0 104 aa16.72■□□□□ 0.27
COL27A1-207ENST00000494090 VAX2Q9UIW0 290 aa16.72■□□□□ 0.27
COL27A1-207ENST00000494090 TRAV20A0A0B4J274 112 aa16.72■□□□□ 0.27
COL27A1-207ENST00000494090 A0A1W2PNV4 684 aa16.72■□□□□ 0.27
COL27A1-207ENST00000494090 CDRT15L2A8MXV6 281 aa16.72■□□□□ 0.27
COL27A1-207ENST00000494090 MGAT2Q10469 447 aa16.72■□□□□ 0.27
COL27A1-207ENST00000494090 P2RY6Q15077 328 aa16.72■□□□□ 0.27
COL27A1-207ENST00000494090 TCTEX1D1Q8N7M0 179 aa16.72■□□□□ 0.27
COL27A1-207ENST00000494090 OR4D10Q8NGI6 311 aa16.72■□□□□ 0.27
COL27A1-207ENST00000494090 LILRB1Q8NHL6 650 aaPredicted RBP16.72■□□□□ 0.27
COL27A1-207ENST00000494090 RNF122Q9H9V4 155 aa16.72■□□□□ 0.27
COL27A1-207ENST00000494090 NKX2-6A6NCS4 301 aa16.72■□□□□ 0.27
COL27A1-207ENST00000494090 HLA-DQB1P01920 261 aa16.72■□□□□ 0.27
COL27A1-207ENST00000494090 ARG1P05089 322 aa16.72■□□□□ 0.27
COL27A1-207ENST00000494090 SCGB1C2P0DMR2 95 aa16.72■□□□□ 0.27
COL27A1-207ENST00000494090 CBLN2Q8IUK8 224 aa16.72■□□□□ 0.27
COL27A1-207ENST00000494090 OR2T10Q8NGZ9 312 aa16.72■□□□□ 0.27
COL27A1-207ENST00000494090 TTTY12Q9BZ98 90 aa16.72■□□□□ 0.27
COL27A1-207ENST00000494090 C7orf77A4D0Y5 90 aa16.71■□□□□ 0.27
COL27A1-207ENST00000494090 CCL21O00585 134 aa16.71■□□□□ 0.27
COL27A1-207ENST00000494090 OR5AL1P0C617 328 aa16.71■□□□□ 0.27
COL27A1-207ENST00000494090 PLPPR5Q32ZL2 321 aa16.71■□□□□ 0.27
COL27A1-207ENST00000494090 OR1L8Q8NGR8 309 aa16.71■□□□□ 0.27
COL27A1-207ENST00000494090 FGF11Q92914 225 aa16.71■□□□□ 0.27
COL27A1-207ENST00000494090 CLEC5AQ9NY25 188 aa16.71■□□□□ 0.27
COL27A1-207ENST00000494090 VSIG10L2P0DP72 767 aa16.71■□□□□ 0.27
COL27A1-207ENST00000494090 MESP2Q0VG99 397 aa16.71■□□□□ 0.27
COL27A1-207ENST00000494090 PMS2P11Q13670 270 aa16.71■□□□□ 0.27
COL27A1-207ENST00000494090 IGSF23A1L1A6 192 aa16.71■□□□□ 0.27
COL27A1-207ENST00000494090 PAFAH1B2P68402 229 aa16.71■□□□□ 0.27
COL27A1-207ENST00000494090 ZNF501Q96CX3 271 aaPredicted RBP16.71■□□□□ 0.27
COL27A1-207ENST00000494090 HARBI1Q96MB7 349 aa16.71■□□□□ 0.27
COL27A1-207ENST00000494090 PRSS50Q9UI38 385 aa16.71■□□□□ 0.27
COL27A1-207ENST00000494090 AGFG2O95081 481 aa16.71■□□□□ 0.26
COL27A1-207ENST00000494090 HIKESHIQ53FT3 197 aa16.71■□□□□ 0.26
COL27A1-207ENST00000494090 DDA1Q9BW61 102 aa16.71■□□□□ 0.26
COL27A1-207ENST00000494090 RAB33BQ9H082 229 aa16.71■□□□□ 0.26
COL27A1-207ENST00000494090 VAX1Q5SQQ9 334 aa16.7■□□□□ 0.26
COL27A1-207ENST00000494090 CHCHD2P9Q5T1J5 151 aaPredicted RBP16.7■□□□□ 0.26
COL27A1-207ENST00000494090 SIRT7Q9NRC8 400 aa16.7■□□□□ 0.26
COL27A1-207ENST00000494090 PLXNB2O15031 1838 aa16.7■□□□□ 0.26
COL27A1-207ENST00000494090 COL11A2P13942 1736 aaPredicted RBP16.7■□□□□ 0.26
COL27A1-207ENST00000494090 FAM87AP0C7U9 286 aa16.7■□□□□ 0.26
COL27A1-207ENST00000494090 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa16.7■□□□□ 0.26
COL27A1-207ENST00000494090 PGLYRP3Q96LB9 341 aa16.7■□□□□ 0.26
COL27A1-207ENST00000494090 PPIAL4EA0A075B759 164 aa16.7■□□□□ 0.26
COL27A1-207ENST00000494090 A0A0U1RQV5 110 aa16.7■□□□□ 0.26
COL27A1-207ENST00000494090 PPIAL4DF5H284 164 aa16.7■□□□□ 0.26
COL27A1-207ENST00000494090 SPINK4O60575 86 aa16.7■□□□□ 0.26
COL27A1-207ENST00000494090 PPIAL4FP0DN26 164 aa16.7■□□□□ 0.26
COL27A1-207ENST00000494090 NAAAQ02083 359 aa16.7■□□□□ 0.26
COL27A1-207ENST00000494090 EIF4E3Q8N5X7 224 aaKnown RBP16.7■□□□□ 0.26
COL27A1-207ENST00000494090 OR10A7Q8NGE5 316 aa16.7■□□□□ 0.26
COL27A1-207ENST00000494090 RSRP1Q9BUV0 290 aa16.7■□□□□ 0.26
COL27A1-207ENST00000494090 TMUB1Q9BVT8 246 aa16.7■□□□□ 0.26
COL27A1-207ENST00000494090 PPIAL4AQ9Y536 164 aa16.7■□□□□ 0.26
COL27A1-207ENST00000494090 ERVS71-1P61550 626 aa16.7■□□□□ 0.26
COL27A1-207ENST00000494090 KCNMB1Q16558 191 aa16.7■□□□□ 0.26
COL27A1-207ENST00000494090 TMEM183BQ1AE95 376 aa16.7■□□□□ 0.26
COL27A1-207ENST00000494090 FAM27BQ5VT28 67 aa16.7■□□□□ 0.26
COL27A1-207ENST00000494090 SLC23A3Q6PIS1 610 aa16.7■□□□□ 0.26
COL27A1-207ENST00000494090 A0A1W2PRD5 423 aa16.69■□□□□ 0.26
COL27A1-207ENST00000494090 A0A1W2PRF3 423 aa16.69■□□□□ 0.26
COL27A1-207ENST00000494090 A0A1W2PRM7 423 aa16.69■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms