RNA–Protein interactions for RNA: ENST00000493695.1

SMC4-223, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 2

Gene SMC4, Length 457 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-223ENST00000493695 Q3ZCU0 254 aa1.37□□□□□ -2.19
SMC4-223ENST00000493695 FBXO48Q5FWF7 155 aa1.37□□□□□ -2.19
SMC4-223ENST00000493695 HES3Q5TGS1 186 aa1.37□□□□□ -2.19
SMC4-223ENST00000493695 AHSA2Q719I0 299 aa1.37□□□□□ -2.19
SMC4-223ENST00000493695 COPS6Q7L5N1 327 aa1.37□□□□□ -2.19
SMC4-223ENST00000493695 C10orf107Q8IVU9 208 aa1.37□□□□□ -2.19
SMC4-223ENST00000493695 OR11G2Q8NGC1 345 aa1.37□□□□□ -2.19
SMC4-223ENST00000493695 CD200R1Q8TD46 325 aa1.37□□□□□ -2.19
SMC4-223ENST00000493695 LMX1AQ8TE12 382 aa1.37□□□□□ -2.19
SMC4-223ENST00000493695 VPREB3Q9UKI3 123 aa1.37□□□□□ -2.19
SMC4-223ENST00000493695 BTRCQ9Y297 605 aa1.37□□□□□ -2.19
SMC4-223ENST00000493695 USP42Q9H9J4 1324 aaKnown RBP1.37□□□□□ -2.19
SMC4-223ENST00000493695 KIAA0232Q92628 1395 aa1.36□□□□□ -2.19
SMC4-223ENST00000493695 ADAMTS7Q9UKP4 1686 aa1.36□□□□□ -2.19
SMC4-223ENST00000493695 TRAV8-2A0A0B4J237 113 aa1.36□□□□□ -2.19
SMC4-223ENST00000493695 C17orf98A8MV24 154 aa1.36□□□□□ -2.19
SMC4-223ENST00000493695 J3QLI3 93 aa1.36□□□□□ -2.19
SMC4-223ENST00000493695 FABP7O15540 132 aa1.36□□□□□ -2.19
SMC4-223ENST00000493695 DENRO43583 198 aaKnown RBP1.36□□□□□ -2.19
SMC4-223ENST00000493695 BRI3O95415 125 aa1.36□□□□□ -2.19
SMC4-223ENST00000493695 GUSBP08236 651 aa1.36□□□□□ -2.19
SMC4-223ENST00000493695 SPNP16150 400 aa1.36□□□□□ -2.19
SMC4-223ENST00000493695 CBR1P16152 277 aa1.36□□□□□ -2.19
SMC4-223ENST00000493695 RAB25P57735 213 aa1.36□□□□□ -2.19
SMC4-223ENST00000493695 PTPRKQ15262 1439 aa1.36□□□□□ -2.19
SMC4-223ENST00000493695 OR8G1Q15617 311 aa1.36□□□□□ -2.19
SMC4-223ENST00000493695 SPIN4Q56A73 249 aa1.36□□□□□ -2.19
SMC4-223ENST00000493695 NOXRED1Q6NXP6 359 aa1.36□□□□□ -2.19
SMC4-223ENST00000493695 Q6ZRU5 148 aa1.36□□□□□ -2.19
SMC4-223ENST00000493695 OLIG3Q7RTU3 272 aa1.36□□□□□ -2.19
SMC4-223ENST00000493695 MUC15Q8N387 334 aa1.36□□□□□ -2.19
SMC4-223ENST00000493695 OR10P1Q8NGE3 313 aa1.36□□□□□ -2.19
SMC4-223ENST00000493695 OR2V1Q8NHB1 315 aa1.36□□□□□ -2.19
SMC4-223ENST00000493695 DTD1Q8TEA8 209 aa1.36□□□□□ -2.19
SMC4-223ENST00000493695 TMIGD2Q96BF3 282 aa1.36□□□□□ -2.19
SMC4-223ENST00000493695 FAAP24Q9BTP7 215 aa1.36□□□□□ -2.19
SMC4-223ENST00000493695 OR51E2Q9H255 320 aa1.36□□□□□ -2.19
SMC4-223ENST00000493695 TRPM3Q9HCF6 1732 aaPredicted RBP1.36□□□□□ -2.19
SMC4-223ENST00000493695 AGPAT3Q9NRZ7 376 aa1.36□□□□□ -2.19
SMC4-223ENST00000493695 MRPL16Q9NX20 251 aaKnown RBP1.36□□□□□ -2.19
SMC4-223ENST00000493695 URGCP-MRPS24S4R325 110 aa1.36□□□□□ -2.19
SMC4-223ENST00000493695 NUP153P49790 1475 aaKnown RBP1.36□□□□□ -2.19
SMC4-223ENST00000493695 ADAMTSL1Q8N6G6 1762 aa1.35□□□□□ -2.19
SMC4-223ENST00000493695 ZNF879B4DU55 563 aa1.35□□□□□ -2.19
SMC4-223ENST00000493695 LDOC1O95751 146 aaPredicted RBP1.35□□□□□ -2.19
SMC4-223ENST00000493695 OR12D1P0DN82 309 aa1.35□□□□□ -2.19
SMC4-223ENST00000493695 CSRP1P21291 193 aaKnown RBP1.35□□□□□ -2.19
SMC4-223ENST00000493695 S100A2P29034 98 aa1.35□□□□□ -2.19
SMC4-223ENST00000493695 CBX5P45973 191 aa1.35□□□□□ -2.19
SMC4-223ENST00000493695 MP68P56378 58 aa1.35□□□□□ -2.19
SMC4-223ENST00000493695 PSG4Q00888 419 aa1.35□□□□□ -2.19
SMC4-223ENST00000493695 FOXF1Q12946 379 aa1.35□□□□□ -2.19
SMC4-223ENST00000493695 STX3Q13277 289 aa1.35□□□□□ -2.19
SMC4-223ENST00000493695 ZFAND2AQ8N6M9 145 aa1.35□□□□□ -2.19
SMC4-223ENST00000493695 TRIML2Q8N7C3 387 aa1.35□□□□□ -2.19
SMC4-223ENST00000493695 PDCD6IPQ8WUM4 868 aaKnown RBP1.35□□□□□ -2.19
SMC4-223ENST00000493695 HIST1H2BAQ96A08 127 aa1.35□□□□□ -2.19
SMC4-223ENST00000493695 PGLYRP3Q96LB9 341 aa1.35□□□□□ -2.19
SMC4-223ENST00000493695 CATSPER2Q96P56 530 aa1.35□□□□□ -2.19
SMC4-223ENST00000493695 TAPBPLQ9BX59 468 aa1.35□□□□□ -2.19
SMC4-223ENST00000493695 TAS2R13Q9NYV9 303 aa1.35□□□□□ -2.19
SMC4-223ENST00000493695 ENPP5Q9UJA9 477 aa1.35□□□□□ -2.19
SMC4-223ENST00000493695 STK38LQ9Y2H1 464 aa1.35□□□□□ -2.19
SMC4-223ENST00000493695 MYO5BQ9ULV0 1848 aa1.35□□□□□ -2.19
SMC4-223ENST00000493695 DNMT1P26358 1616 aaKnown RBP1.34□□□□□ -2.19
SMC4-223ENST00000493695 GOLGA8IPA6NC78 632 aa1.34□□□□□ -2.19
SMC4-223ENST00000493695 SLC35E2BP0CK96 405 aa1.34□□□□□ -2.19
SMC4-223ENST00000493695 HSPA13P48723 471 aa1.34□□□□□ -2.19
SMC4-223ENST00000493695 HADHBP55084 474 aaKnown RBP1.34□□□□□ -2.19
SMC4-223ENST00000493695 UBE2KP61086 200 aa1.34□□□□□ -2.19
SMC4-223ENST00000493695 APOFQ13790 326 aa1.34□□□□□ -2.19
SMC4-223ENST00000493695 PAFAH1B3Q15102 231 aaKnown RBP1.34□□□□□ -2.19
SMC4-223ENST00000493695 OR4D1Q15615 310 aa1.34□□□□□ -2.19
SMC4-223ENST00000493695 PCOTHQ58A44 107 aa1.34□□□□□ -2.19
SMC4-223ENST00000493695 OR10J3Q5JRS4 329 aa1.34□□□□□ -2.19
SMC4-223ENST00000493695 ZNF322Q6U7Q0 402 aaPredicted RBP1.34□□□□□ -2.19
SMC4-223ENST00000493695 MSRB3Q8IXL7 192 aa1.34□□□□□ -2.19
SMC4-223ENST00000493695 ZNF567Q8N184 647 aa1.34□□□□□ -2.19
SMC4-223ENST00000493695 OR9I1Q8NGQ6 314 aa1.34□□□□□ -2.19
SMC4-223ENST00000493695 GTF2H4Q92759 462 aa1.34□□□□□ -2.19
SMC4-223ENST00000493695 CCDC124Q96CT7 223 aaKnown RBP1.34□□□□□ -2.19
SMC4-223ENST00000493695 DDIT4LQ96D03 193 aa1.34□□□□□ -2.19
SMC4-223ENST00000493695 MRAP2Q96G30 205 aa1.34□□□□□ -2.19
SMC4-223ENST00000493695 SERPINB11Q96P15 392 aa1.34□□□□□ -2.19
SMC4-223ENST00000493695 TUBA4BQ9H853 241 aa1.34□□□□□ -2.19
SMC4-223ENST00000493695 OR51B4Q9Y5P0 310 aa1.34□□□□□ -2.19
SMC4-223ENST00000493695 HSPE1-MOB4S4R3N1 261 aa1.34□□□□□ -2.19
SMC4-223ENST00000493695 LCTP09848 1927 aa1.34□□□□□ -2.2
SMC4-223ENST00000493695 ADGRB3O60242 1522 aa1.34□□□□□ -2.2
SMC4-223ENST00000493695 ABCB11O95342 1321 aa1.34□□□□□ -2.2
SMC4-223ENST00000493695 ATAD5Q96QE3 1844 aa1.33□□□□□ -2.2
SMC4-223ENST00000493695 COL4A2P08572 1712 aa1.33□□□□□ -2.2
SMC4-223ENST00000493695 SLC25A20O43772 301 aa1.33□□□□□ -2.2
SMC4-223ENST00000493695 GP1BAP07359 652 aa1.33□□□□□ -2.2
SMC4-223ENST00000493695 KRTAP12-1P59990 96 aa1.33□□□□□ -2.2
SMC4-223ENST00000493695 RAB2AP61019 212 aa1.33□□□□□ -2.2
SMC4-223ENST00000493695 SKP2Q13309 424 aa1.33□□□□□ -2.2
SMC4-223ENST00000493695 TMEM249Q2WGJ8 235 aa1.33□□□□□ -2.2
SMC4-223ENST00000493695 NIPAL1Q6NVV3 410 aa1.33□□□□□ -2.2
SMC4-223ENST00000493695 ZNF767PQ75MW2 155 aa1.33□□□□□ -2.2
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms