RNA–Protein interactions for RNA: ENST00000492602.5

SEC13-219, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, human

TSL 3

Gene SEC13, Length 393 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SEC13-219	ENST00000492602	HPSE2	Q8WWQ2	592 aa		4.06	□□□□□ -1.76
SEC13-219	ENST00000492602	HRASLS5	Q96KN8	279 aa		4.06	□□□□□ -1.76
SEC13-219	ENST00000492602	APOL4	Q9BPW4	351 aa		4.06	□□□□□ -1.76
SEC13-219	ENST00000492602	NRIP2	Q9BQI9	281 aa		4.06	□□□□□ -1.76
SEC13-219	ENST00000492602	NEURL2	Q9BR09	285 aa		4.06	□□□□□ -1.76
SEC13-219	ENST00000492602	TTTY10	Q9BZA0	68 aa		4.06	□□□□□ -1.76
SEC13-219	ENST00000492602	COMMD4	Q9H0A8	199 aa		4.06	□□□□□ -1.76
SEC13-219	ENST00000492602	WFDC10A	Q9H1F0	79 aa		4.06	□□□□□ -1.76
SEC13-219	ENST00000492602	ABCG5	Q9H222	651 aa		4.06	□□□□□ -1.76
SEC13-219	ENST00000492602	PAK1IP1	Q9NWT1	392 aa	Predicted RBP	4.06	□□□□□ -1.76
SEC13-219	ENST00000492602	FAM206A	Q9NX38	181 aa		4.06	□□□□□ -1.76
SEC13-219	ENST00000492602	FBXL17	Q9UF56	701 aa		4.06	□□□□□ -1.76
SEC13-219	ENST00000492602	APLN	Q9ULZ1	77 aa		4.06	□□□□□ -1.76
SEC13-219	ENST00000492602	POMP	Q9Y244	141 aa		4.06	□□□□□ -1.76
SEC13-219	ENST00000492602	UBE2J1	Q9Y385	318 aa	Predicted RBP	4.06	□□□□□ -1.76
SEC13-219	ENST00000492602	TCRBV3S1	A0A5B6	114 aa		4.05	□□□□□ -1.76
SEC13-219	ENST00000492602	FAM172BP	A6NC97	362 aa		4.05	□□□□□ -1.76
SEC13-219	ENST00000492602	FAM90A18P	A6NE21	464 aa		4.05	□□□□□ -1.76
SEC13-219	ENST00000492602	FAM90A16P	A6NEW6	464 aa		4.05	□□□□□ -1.76
SEC13-219	ENST00000492602	FAM90A20P	A6NIJ5	464 aa		4.05	□□□□□ -1.76
SEC13-219	ENST00000492602	FAM90A9P	A6NNJ1	464 aa		4.05	□□□□□ -1.76
SEC13-219	ENST00000492602	FAM90A12P	A8MX19	464 aa		4.05	□□□□□ -1.76
SEC13-219	ENST00000492602	FAM90A5P	A8MXJ8	464 aa		4.05	□□□□□ -1.76
SEC13-219	ENST00000492602	PRR32	B1ATL7	298 aa		4.05	□□□□□ -1.76
SEC13-219	ENST00000492602	OR11H12	B2RN74	326 aa		4.05	□□□□□ -1.76
SEC13-219	ENST00000492602	MGST3	O14880	152 aa		4.05	□□□□□ -1.76
SEC13-219	ENST00000492602	DEGS1	O15121	323 aa		4.05	□□□□□ -1.76
SEC13-219	ENST00000492602	MMP23A	O75900	390 aa		4.05	□□□□□ -1.76
SEC13-219	ENST00000492602	CD2	P06729	351 aa		4.05	□□□□□ -1.76
SEC13-219	ENST00000492602	HTR1A	P08908	422 aa		4.05	□□□□□ -1.76
SEC13-219	ENST00000492602	FAM90A15P	P0C7V4	464 aa		4.05	□□□□□ -1.76
SEC13-219	ENST00000492602	FAM90A13P	P0C7W8	464 aa		4.05	□□□□□ -1.76
SEC13-219	ENST00000492602	FAM90A14P	P0C7W9	464 aa		4.05	□□□□□ -1.76
SEC13-219	ENST00000492602	FAM90A24P	P0C7X0	464 aa		4.05	□□□□□ -1.76
SEC13-219	ENST00000492602	TMEM225B	P0DP42	221 aa		4.05	□□□□□ -1.76
SEC13-219	ENST00000492602	DBT	P11182	482 aa	Known RBP	4.05	□□□□□ -1.76
SEC13-219	ENST00000492602	GZMH	P20718	246 aa		4.05	□□□□□ -1.76
SEC13-219	ENST00000492602	BMI1	P35226	326 aa		4.05	□□□□□ -1.76
SEC13-219	ENST00000492602	DAP	P51397	102 aa		4.05	□□□□□ -1.76
SEC13-219	ENST00000492602	GBX2	P52951	348 aa	Predicted RBP	4.05	□□□□□ -1.76
SEC13-219	ENST00000492602	LINC00205	P59089	165 aa		4.05	□□□□□ -1.76
SEC13-219	ENST00000492602	RBM39	Q14498	530 aa	Known RBP	4.05	□□□□□ -1.76
SEC13-219	ENST00000492602	EDDM3A	Q14507	147 aa		4.05	□□□□□ -1.76
SEC13-219	ENST00000492602	ATP6AP1	Q15904	470 aa		4.05	□□□□□ -1.76
SEC13-219	ENST00000492602	ODF4	Q2M2E3	257 aa		4.05	□□□□□ -1.76
SEC13-219	ENST00000492602	MRGPRG-AS1	Q2M3A8	158 aa		4.05	□□□□□ -1.76
SEC13-219	ENST00000492602	SOHLH1	Q5JUK2	328 aa		4.05	□□□□□ -1.76
SEC13-219	ENST00000492602	LCN12	Q6JVE5	192 aa		4.05	□□□□□ -1.76
SEC13-219	ENST00000492602	ZFP1	Q6P2D0	407 aa		4.05	□□□□□ -1.76
SEC13-219	ENST00000492602	FAHD1	Q6P587	224 aa		4.05	□□□□□ -1.76
SEC13-219	ENST00000492602	TMPRSS11A	Q6ZMR5	421 aa		4.05	□□□□□ -1.76
SEC13-219	ENST00000492602	SLC25A26	Q70HW3	274 aa		4.05	□□□□□ -1.76
SEC13-219	ENST00000492602	KRT74	Q7RTS7	529 aa		4.05	□□□□□ -1.76
SEC13-219	ENST00000492602	ANGPTL5	Q86XS5	388 aa		4.05	□□□□□ -1.76
SEC13-219	ENST00000492602	SERPINA12	Q8IW75	414 aa		4.05	□□□□□ -1.76
SEC13-219	ENST00000492602	OR8H2	Q8N162	312 aa		4.05	□□□□□ -1.76
SEC13-219	ENST00000492602	FAM58A	Q8N1B3	248 aa		4.05	□□□□□ -1.76
SEC13-219	ENST00000492602	STX19	Q8N4C7	294 aa		4.05	□□□□□ -1.76
SEC13-219	ENST00000492602	ACBD7	Q8N6N7	88 aa		4.05	□□□□□ -1.76
SEC13-219	ENST00000492602	OR13C3	Q8NGS6	347 aa		4.05	□□□□□ -1.76
SEC13-219	ENST00000492602	EMG1	Q92979	244 aa	Known RBP	4.05	□□□□□ -1.76
SEC13-219	ENST00000492602	SPSB1	Q96BD6	273 aa		4.05	□□□□□ -1.76
SEC13-219	ENST00000492602	FGGY	Q96C11	551 aa		4.05	□□□□□ -1.76
SEC13-219	ENST00000492602	ZNF503	Q96F45	646 aa		4.05	□□□□□ -1.76
SEC13-219	ENST00000492602	GPER1	Q99527	375 aa		4.05	□□□□□ -1.76
SEC13-219	ENST00000492602	JAM3	Q9BX67	310 aa		4.05	□□□□□ -1.76
SEC13-219	ENST00000492602	KRTAP9-2	Q9BYQ4	174 aa		4.05	□□□□□ -1.76
SEC13-219	ENST00000492602	TOLLIP	Q9H0E2	274 aa		4.05	□□□□□ -1.76
SEC13-219	ENST00000492602	SEBOX	Q9HB31	216 aa	Predicted RBP	4.05	□□□□□ -1.76
SEC13-219	ENST00000492602	EXOSC4	Q9NPD3	245 aa	Known RBP	4.05	□□□□□ -1.76
SEC13-219	ENST00000492602	GPR173	Q9NS66	373 aa		4.05	□□□□□ -1.76
SEC13-219	ENST00000492602	FAM118A	Q9NWS6	357 aa		4.05	□□□□□ -1.76
SEC13-219	ENST00000492602	ETAA1	Q9NY74	926 aa		4.05	□□□□□ -1.76
SEC13-219	ENST00000492602	OR6C3	Q9NZP0	311 aa		4.05	□□□□□ -1.76
SEC13-219	ENST00000492602	CKLF	Q9UBR5	152 aa		4.05	□□□□□ -1.76
SEC13-219	ENST00000492602	PLA2G2D	Q9UNK4	145 aa		4.05	□□□□□ -1.76
SEC13-219	ENST00000492602	AMMECR1	Q9Y4X0	333 aa	Predicted RBP	4.05	□□□□□ -1.76
SEC13-219	ENST00000492602	LINC00312	Q9Y6C7	94 aa		4.05	□□□□□ -1.76
SEC13-219	ENST00000492602		A0A1W2PQL4	384 aa	Predicted RBP	4.04	□□□□□ -1.76
SEC13-219	ENST00000492602	PQLC2L	A1A4F0	135 aa		4.04	□□□□□ -1.76
SEC13-219	ENST00000492602	IRGM	A1A4Y4	181 aa		4.04	□□□□□ -1.76
SEC13-219	ENST00000492602	IZUMO1R	A6ND01	250 aa		4.04	□□□□□ -1.76
SEC13-219	ENST00000492602	ZAR1L	A6NP61	321 aa		4.04	□□□□□ -1.76
SEC13-219	ENST00000492602	OOSP1	A8MZH6	123 aa		4.04	□□□□□ -1.76
SEC13-219	ENST00000492602	BUB1B-PAK6	H3BSN5	160 aa		4.04	□□□□□ -1.76
SEC13-219	ENST00000492602		J3QLW9	94 aa		4.04	□□□□□ -1.76
SEC13-219	ENST00000492602	EREG	O14944	169 aa		4.04	□□□□□ -1.76
SEC13-219	ENST00000492602	PRKY	O43930	277 aa		4.04	□□□□□ -1.76
SEC13-219	ENST00000492602	INMT	O95050	263 aa		4.04	□□□□□ -1.76
SEC13-219	ENST00000492602	HAND1	O96004	215 aa		4.04	□□□□□ -1.76
SEC13-219	ENST00000492602	IGKV1D-33	P01593	117 aa		4.04	□□□□□ -1.76
SEC13-219	ENST00000492602	IGKV1-33	P01594	117 aa		4.04	□□□□□ -1.76
SEC13-219	ENST00000492602	IGLV1-47	P01700	117 aa		4.04	□□□□□ -1.76
SEC13-219	ENST00000492602	TTR	P02766	147 aa		4.04	□□□□□ -1.76
SEC13-219	ENST00000492602	CSTB	P04080	98 aa	Known RBP	4.04	□□□□□ -1.76
SEC13-219	ENST00000492602	CD7	P09564	240 aa		4.04	□□□□□ -1.76
SEC13-219	ENST00000492602	OR5H8	P0DN80	308 aa		4.04	□□□□□ -1.76
SEC13-219	ENST00000492602	T-ENOL	P0DO92	83 aa		4.04	□□□□□ -1.76
SEC13-219	ENST00000492602	ZNF44	P15621	663 aa		4.04	□□□□□ -1.76
SEC13-219	ENST00000492602	ZNF19	P17023	458 aa		4.04	□□□□□ -1.76

Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms