RNA–Protein interactions for RNA: ENST00000492601.2

SGMS1-204, Transcript of sphingomyelin synthase 1, humanhuman

TSL 1 (best)

Gene SGMS1, Length 625 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGMS1-204ENST00000492601 IFT22Q9H7X7 185 aa13.7□□□□□ -0.22
SGMS1-204ENST00000492601 PAK1IP1Q9NWT1 392 aaPredicted RBP13.7□□□□□ -0.22
SGMS1-204ENST00000492601 CHCHD3Q9NX63 227 aaKnown RBP13.7□□□□□ -0.22
SGMS1-204ENST00000492601 TRAV8-7A0A075B6U6 113 aa13.69□□□□□ -0.22
SGMS1-204ENST00000492601 TRBV5-5A0A0J9YX44 114 aa13.69□□□□□ -0.22
SGMS1-204ENST00000492601 PNMA8CA0A1B0GUJ8 204 aa13.69□□□□□ -0.22
SGMS1-204ENST00000492601 A0A1W2PPK0 400 aa13.69□□□□□ -0.22
SGMS1-204ENST00000492601 TMEM30CPA0ZSE6 113 aa13.69□□□□□ -0.22
SGMS1-204ENST00000492601 PSMB11A5LHX3 300 aa13.69□□□□□ -0.22
SGMS1-204ENST00000492601 IGKV1D-33P01593 117 aa13.69□□□□□ -0.22
SGMS1-204ENST00000492601 IGKV1-33P01594 117 aa13.69□□□□□ -0.22
SGMS1-204ENST00000492601 RAB7AP51149 207 aa13.69□□□□□ -0.22
SGMS1-204ENST00000492601 RPS11P62280 158 aaKnown RBP eCLIP13.69□□□□□ -0.22
SGMS1-204ENST00000492601 Q499Y3 187 aa13.69□□□□□ -0.22
SGMS1-204ENST00000492601 TTC23Q5W5X9 447 aa13.69□□□□□ -0.22
SGMS1-204ENST00000492601 ZNF329Q86UD4 541 aa13.69□□□□□ -0.22
SGMS1-204ENST00000492601 WFDC9Q8NEX5 89 aa13.69□□□□□ -0.22
SGMS1-204ENST00000492601 OR10A7Q8NGE5 316 aa13.69□□□□□ -0.22
SGMS1-204ENST00000492601 GGHQ92820 318 aa13.69□□□□□ -0.22
SGMS1-204ENST00000492601 ARL11Q969Q4 196 aa13.69□□□□□ -0.22
SGMS1-204ENST00000492601 CKLFQ9UBR5 152 aa13.69□□□□□ -0.22
SGMS1-204ENST00000492601 IGHV3-43A0A0B4J1X8 118 aa13.68□□□□□ -0.22
SGMS1-204ENST00000492601 HSD17B6O14756 317 aa13.68□□□□□ -0.22
SGMS1-204ENST00000492601 IGHV3-43DP0DP04 118 aa13.68□□□□□ -0.22
SGMS1-204ENST00000492601 GTF2F2P13984 249 aa13.68□□□□□ -0.22
SGMS1-204ENST00000492601 GZMHP20718 246 aa13.68□□□□□ -0.22
SGMS1-204ENST00000492601 REG1BP48304 166 aa13.68□□□□□ -0.22
SGMS1-204ENST00000492601 LOXL3P58215 753 aa13.68□□□□□ -0.22
SGMS1-204ENST00000492601 MED21Q13503 144 aa13.68□□□□□ -0.22
SGMS1-204ENST00000492601 MPV17LQ2QL34 196 aa13.68□□□□□ -0.22
SGMS1-204ENST00000492601 FAM53AQ6NSI3 398 aaPredicted RBP13.68□□□□□ -0.22
SGMS1-204ENST00000492601 SLC16A12Q6ZSM3 486 aa13.68□□□□□ -0.22
SGMS1-204ENST00000492601 MOB3BQ86TA1 216 aa13.68□□□□□ -0.22
SGMS1-204ENST00000492601 LINC00596Q86U02 117 aa13.68□□□□□ -0.22
SGMS1-204ENST00000492601 OR8H3Q8N146 312 aa13.68□□□□□ -0.22
SGMS1-204ENST00000492601 DHRSXQ8N5I4 330 aa13.68□□□□□ -0.22
SGMS1-204ENST00000492601 JAGN1Q8N5M9 183 aa13.68□□□□□ -0.22
SGMS1-204ENST00000492601 C5orf56Q8N8D9 126 aa13.68□□□□□ -0.22
SGMS1-204ENST00000492601 SETD9Q8NE22 299 aa13.68□□□□□ -0.22
SGMS1-204ENST00000492601 MUL1Q969V5 352 aa13.68□□□□□ -0.22
SGMS1-204ENST00000492601 PGLYRP3Q96LB9 341 aa13.68□□□□□ -0.22
SGMS1-204ENST00000492601 NOL4LQ96MY1 436 aaPredicted RBP13.68□□□□□ -0.22
SGMS1-204ENST00000492601 OR14A2Q96R54 314 aa13.68□□□□□ -0.22
SGMS1-204ENST00000492601 IGHV3-72A0A0B4J1Y9 119 aa13.67□□□□□ -0.22
SGMS1-204ENST00000492601 C15orf65H3BRN8 121 aa13.67□□□□□ -0.22
SGMS1-204ENST00000492601 SDCBPO00560 298 aaPredicted RBP13.67□□□□□ -0.22
SGMS1-204ENST00000492601 ZNF780AO75290 641 aaPredicted RBP13.67□□□□□ -0.22
SGMS1-204ENST00000492601 GPX5O75715 221 aa13.67□□□□□ -0.22
SGMS1-204ENST00000492601 ADARB1P78563 741 aaKnown RBP13.67□□□□□ -0.22
SGMS1-204ENST00000492601 ST3GAL4Q11206 333 aa13.67□□□□□ -0.22
SGMS1-204ENST00000492601 YIF1BQ5BJH7 314 aa13.67□□□□□ -0.22
SGMS1-204ENST00000492601 ZNF485Q8NCK3 441 aa13.67□□□□□ -0.22
SGMS1-204ENST00000492601 LINC00527Q9UJ94 153 aa13.67□□□□□ -0.22
SGMS1-204ENST00000492601 MRPS28Q9Y2Q9 187 aaKnown RBP13.67□□□□□ -0.22
SGMS1-204ENST00000492601 IGHV1-3A0A0C4DH29 117 aa13.66□□□□□ -0.22
SGMS1-204ENST00000492601 SERPINE3A8MV23 424 aa13.66□□□□□ -0.22
SGMS1-204ENST00000492601 AIPO00170 330 aa13.66□□□□□ -0.22
SGMS1-204ENST00000492601 CCRL2O00421 344 aa13.66□□□□□ -0.22
SGMS1-204ENST00000492601 MT-ND4P03905 459 aa13.66□□□□□ -0.22
SGMS1-204ENST00000492601 MAS1P04201 325 aa13.66□□□□□ -0.22
SGMS1-204ENST00000492601 GAPDHP04406 335 aaKnown RBP13.66□□□□□ -0.22
SGMS1-204ENST00000492601 SLC35A2P78381 396 aa13.66□□□□□ -0.22
SGMS1-204ENST00000492601 ZNF816Q0VGE8 651 aaPredicted RBP13.66□□□□□ -0.22
SGMS1-204ENST00000492601 GLIPR1L1Q6UWM5 242 aa13.66□□□□□ -0.22
SGMS1-204ENST00000492601 ZNF497Q6ZNH5 498 aa13.66□□□□□ -0.22
SGMS1-204ENST00000492601 PACRGLQ8N7B6 248 aa13.66□□□□□ -0.22
SGMS1-204ENST00000492601 TRBV5-7A0A0A0MS05 114 aa13.65□□□□□ -0.22
SGMS1-204ENST00000492601 FGF16O43320 207 aa13.65□□□□□ -0.22
SGMS1-204ENST00000492601 MPIG6BO95866 241 aa13.65□□□□□ -0.22
SGMS1-204ENST00000492601 GNAO1P09471 354 aa13.65□□□□□ -0.22
SGMS1-204ENST00000492601 FSTP19883 344 aa13.65□□□□□ -0.22
SGMS1-204ENST00000492601 GPR176Q14439 515 aa13.65□□□□□ -0.22
SGMS1-204ENST00000492601 RCN1Q15293 331 aa13.65□□□□□ -0.22
SGMS1-204ENST00000492601 AWAT2Q6E213 333 aa13.65□□□□□ -0.22
SGMS1-204ENST00000492601 STX19Q8N4C7 294 aa13.65□□□□□ -0.22
SGMS1-204ENST00000492601 OR52M1Q8NGK5 317 aa13.65□□□□□ -0.22
SGMS1-204ENST00000492601 CHPT1Q8WUD6 406 aa13.65□□□□□ -0.22
SGMS1-204ENST00000492601 BANF2Q9H503 90 aa13.65□□□□□ -0.22
SGMS1-204ENST00000492601 GFOD1Q9NXC2 390 aa13.65□□□□□ -0.22
SGMS1-204ENST00000492601 EFCAB10A6NFE3 127 aa13.64□□□□□ -0.23
SGMS1-204ENST00000492601 LINC01548A6NM66 108 aa13.64□□□□□ -0.23
SGMS1-204ENST00000492601 NCBP2LA6PVI3 153 aaKnown RBP13.64□□□□□ -0.23
SGMS1-204ENST00000492601 MCRIP1C9JLW8 97 aa13.64□□□□□ -0.23
SGMS1-204ENST00000492601 SLC31A2O15432 143 aa13.64□□□□□ -0.23
SGMS1-204ENST00000492601 ORC5O43913 435 aa13.64□□□□□ -0.23
SGMS1-204ENST00000492601 DOC2BQ14184 412 aa13.64□□□□□ -0.23
SGMS1-204ENST00000492601 SYT6Q5T7P8 510 aaPredicted RBP13.64□□□□□ -0.23
SGMS1-204ENST00000492601 RAB12Q6IQ22 244 aa13.64□□□□□ -0.23
SGMS1-204ENST00000492601 LAIR2Q6ISS4 152 aa13.64□□□□□ -0.23
SGMS1-204ENST00000492601 C18orf65Q6ZTR6 163 aa13.64□□□□□ -0.23
SGMS1-204ENST00000492601 SLC35E3Q7Z769 313 aa13.64□□□□□ -0.23
SGMS1-204ENST00000492601 PRR18Q8N4B5 295 aa13.64□□□□□ -0.23
SGMS1-204ENST00000492601 LINC00311Q8N616 119 aa13.64□□□□□ -0.23
SGMS1-204ENST00000492601 OR4K15Q8NH41 348 aa13.64□□□□□ -0.23
SGMS1-204ENST00000492601 CYYR1Q96J86 154 aa13.64□□□□□ -0.23
SGMS1-204ENST00000492601 EAF1Q96JC9 268 aaPredicted RBP13.64□□□□□ -0.23
SGMS1-204ENST00000492601 DERL3Q96Q80 235 aa13.64□□□□□ -0.23
SGMS1-204ENST00000492601 SPACA1Q9HBV2 294 aa13.64□□□□□ -0.23
SGMS1-204ENST00000492601 C8orf4Q9NR00 106 aa13.64□□□□□ -0.23
SGMS1-204ENST00000492601 ETAA1Q9NY74 926 aa13.64□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms