RNA–Protein interactions for RNA: ENST00000492455.1

HMGB1P30-201, Transcript of high mobility group box 1 pseudogene 30, humanhuman

BASIC

Gene HMGB1P30, Length 606 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P30-201ENST00000492455 APOBEC3DQ96AK3 386 aaPredicted RBP1.31□□□□□ -2.2
HMGB1P30-201ENST00000492455 LRRC45Q96CN5 670 aa1.31□□□□□ -2.2
HMGB1P30-201ENST00000492455 TRNT1Q96Q11 434 aaKnown RBP1.31□□□□□ -2.2
HMGB1P30-201ENST00000492455 PKMYT1Q99640 499 aa1.31□□□□□ -2.2
HMGB1P30-201ENST00000492455 BBS2Q9BXC9 721 aa1.31□□□□□ -2.2
HMGB1P30-201ENST00000492455 ABCG5Q9H222 651 aa1.31□□□□□ -2.2
HMGB1P30-201ENST00000492455 C1orf109Q9NX04 203 aa1.31□□□□□ -2.2
HMGB1P30-201ENST00000492455 OR5V1Q9UGF6 321 aa1.31□□□□□ -2.2
HMGB1P30-201ENST00000492455 FBXL3Q9UKT7 428 aa1.31□□□□□ -2.2
HMGB1P30-201ENST00000492455 SCML1Q9UN30 329 aa1.31□□□□□ -2.2
HMGB1P30-201ENST00000492455 U3KQK5 164 aa1.31□□□□□ -2.2
HMGB1P30-201ENST00000492455 LRPPRCP42704 1394 aaKnown RBP1.31□□□□□ -2.2
HMGB1P30-201ENST00000492455 PIK3R4Q99570 1358 aa1.31□□□□□ -2.2
HMGB1P30-201ENST00000492455 TMEM213A2RRL7 107 aa1.3□□□□□ -2.2
HMGB1P30-201ENST00000492455 EFCAB9A8MZ26 197 aa1.3□□□□□ -2.2
HMGB1P30-201ENST00000492455 GGTLC3B5MD39 225 aa1.3□□□□□ -2.2
HMGB1P30-201ENST00000492455 C9J4A7 227 aa1.3□□□□□ -2.2
HMGB1P30-201ENST00000492455 SYNGR1O43759 233 aa1.3□□□□□ -2.2
HMGB1P30-201ENST00000492455 UGT2B11O75310 529 aa1.3□□□□□ -2.2
HMGB1P30-201ENST00000492455 SOX14O95416 240 aa1.3□□□□□ -2.2
HMGB1P30-201ENST00000492455 RAB36O95755 333 aa1.3□□□□□ -2.2
HMGB1P30-201ENST00000492455 LTAP01374 205 aa1.3□□□□□ -2.2
HMGB1P30-201ENST00000492455 HSPA13P48723 471 aa1.3□□□□□ -2.2
HMGB1P30-201ENST00000492455 INPP1P49441 399 aa1.3□□□□□ -2.2
HMGB1P30-201ENST00000492455 PSMD7P51665 324 aa1.3□□□□□ -2.2
HMGB1P30-201ENST00000492455 RAB2AP61019 212 aa1.3□□□□□ -2.2
HMGB1P30-201ENST00000492455 DMTNQ08495 405 aa1.3□□□□□ -2.2
HMGB1P30-201ENST00000492455 DHRS2Q13268 280 aa1.3□□□□□ -2.2
HMGB1P30-201ENST00000492455 TAF9Q16594 264 aa1.3□□□□□ -2.2
HMGB1P30-201ENST00000492455 PDPK2PQ6A1A2 396 aa1.3□□□□□ -2.2
HMGB1P30-201ENST00000492455 NIPAL1Q6NVV3 410 aa1.3□□□□□ -2.2
HMGB1P30-201ENST00000492455 CYHR1Q6ZMK1 362 aa1.3□□□□□ -2.2
HMGB1P30-201ENST00000492455 LYZL2Q7Z4W2 148 aa1.3□□□□□ -2.2
HMGB1P30-201ENST00000492455 MTERF4Q7Z6M4 381 aaKnown RBP1.3□□□□□ -2.2
HMGB1P30-201ENST00000492455 CRLF3Q8IUI8 442 aa1.3□□□□□ -2.2
HMGB1P30-201ENST00000492455 EIF4E3Q8N5X7 224 aaKnown RBP1.3□□□□□ -2.2
HMGB1P30-201ENST00000492455 FER1L6-AS1Q8NA97 138 aa1.3□□□□□ -2.2
HMGB1P30-201ENST00000492455 OR7G1Q8NGA0 311 aa1.3□□□□□ -2.2
HMGB1P30-201ENST00000492455 OR4P4Q8NGL7 312 aa1.3□□□□□ -2.2
HMGB1P30-201ENST00000492455 OR11L1Q8NGX0 322 aa1.3□□□□□ -2.2
HMGB1P30-201ENST00000492455 OR5AK3PQ8NH89 298 aa1.3□□□□□ -2.2
HMGB1P30-201ENST00000492455 DTD1Q8TEA8 209 aa1.3□□□□□ -2.2
HMGB1P30-201ENST00000492455 KCTD4Q8WVF5 259 aa1.3□□□□□ -2.2
HMGB1P30-201ENST00000492455 PPWD1Q96BP3 646 aaKnown RBP1.3□□□□□ -2.2
HMGB1P30-201ENST00000492455 IGF2BP2-AS1Q96M15 143 aa1.3□□□□□ -2.2
HMGB1P30-201ENST00000492455 TRIB3Q96RU7 358 aa1.3□□□□□ -2.2
HMGB1P30-201ENST00000492455 SLC19A3Q9BZV2 496 aa1.3□□□□□ -2.2
HMGB1P30-201ENST00000492455 ALX4Q9H161 411 aaPredicted RBP1.3□□□□□ -2.2
HMGB1P30-201ENST00000492455 DMAC2Q9NW81 257 aa1.3□□□□□ -2.2
HMGB1P30-201ENST00000492455 COMMD9Q9P000 198 aa1.3□□□□□ -2.2
HMGB1P30-201ENST00000492455 VWA8A3KMH1 1905 aa1.3□□□□□ -2.2
HMGB1P30-201ENST00000492455 RAB3GAP2Q9H2M9 1393 aa1.3□□□□□ -2.2
HMGB1P30-201ENST00000492455 IGKV1D-37A0A075B6S9 117 aa1.29□□□□□ -2.2
HMGB1P30-201ENST00000492455 IGHV3OR15-7A0A075B7D8 119 aa1.29□□□□□ -2.2
HMGB1P30-201ENST00000492455 IGKV3D-11A0A0A0MRZ8 115 aa1.29□□□□□ -2.2
HMGB1P30-201ENST00000492455 A0A1B0GU33 70 aa1.29□□□□□ -2.2
HMGB1P30-201ENST00000492455 F5H5K5 113 aa1.29□□□□□ -2.2
HMGB1P30-201ENST00000492455 TOX3O15405 576 aaPredicted RBP1.29□□□□□ -2.2
HMGB1P30-201ENST00000492455 CALUO43852 315 aaPredicted RBP1.29□□□□□ -2.2
HMGB1P30-201ENST00000492455 GUSBP08236 651 aa1.29□□□□□ -2.2
HMGB1P30-201ENST00000492455 PSMB6P28072 239 aa1.29□□□□□ -2.2
HMGB1P30-201ENST00000492455 CRABP2P29373 138 aa1.29□□□□□ -2.2
HMGB1P30-201ENST00000492455 DLX6P56179 175 aa1.29□□□□□ -2.2
HMGB1P30-201ENST00000492455 MEF2BQ02080 365 aaPredicted RBP1.29□□□□□ -2.2
HMGB1P30-201ENST00000492455 SKP2Q13309 424 aa1.29□□□□□ -2.2
HMGB1P30-201ENST00000492455 PAFAH1B3Q15102 231 aaKnown RBP1.29□□□□□ -2.2
HMGB1P30-201ENST00000492455 ZNHIT3Q15649 155 aaPredicted RBP1.29□□□□□ -2.2
HMGB1P30-201ENST00000492455 PYDC2Q56P42 97 aa1.29□□□□□ -2.2
HMGB1P30-201ENST00000492455 HENMT1Q5T8I9 393 aaKnown RBP1.29□□□□□ -2.2
HMGB1P30-201ENST00000492455 XKRXQ6PP77 449 aa1.29□□□□□ -2.2
HMGB1P30-201ENST00000492455 SPATA24Q86W54 205 aa1.29□□□□□ -2.2
HMGB1P30-201ENST00000492455 NIT1Q86X76 327 aa1.29□□□□□ -2.2
HMGB1P30-201ENST00000492455 Q8NAQ8 132 aa1.29□□□□□ -2.2
HMGB1P30-201ENST00000492455 LY6G5BQ8NDX9 201 aa1.29□□□□□ -2.2
HMGB1P30-201ENST00000492455 OR9I1Q8NGQ6 314 aa1.29□□□□□ -2.2
HMGB1P30-201ENST00000492455 CCDC12Q8WUD4 166 aaPredicted RBP1.29□□□□□ -2.2
HMGB1P30-201ENST00000492455 SLC25A44Q96H78 314 aaPredicted RBP1.29□□□□□ -2.2
HMGB1P30-201ENST00000492455 ZNF251Q9BRH9 671 aa1.29□□□□□ -2.2
HMGB1P30-201ENST00000492455 UGT2B28Q9BY64 529 aa1.29□□□□□ -2.2
HMGB1P30-201ENST00000492455 NDEL1Q9GZM8 345 aa1.29□□□□□ -2.2
HMGB1P30-201ENST00000492455 ARL6Q9H0F7 186 aa1.29□□□□□ -2.2
HMGB1P30-201ENST00000492455 ZNF286AQ9HBT8 521 aa1.29□□□□□ -2.2
HMGB1P30-201ENST00000492455 EURLQ9NYK6 297 aa1.29□□□□□ -2.2
HMGB1P30-201ENST00000492455 NAGKQ9UJ70 344 aa1.29□□□□□ -2.2
HMGB1P30-201ENST00000492455 RPUSD1Q9UJJ7 312 aaKnown RBP1.29□□□□□ -2.2
HMGB1P30-201ENST00000492455 SSH2Q76I76 1423 aa1.29□□□□□ -2.2
HMGB1P30-201ENST00000492455 PLXNB1O43157 2135 aa1.28□□□□□ -2.2
HMGB1P30-201ENST00000492455 TRBV24-1A0A075B6N3 115 aa1.28□□□□□ -2.2
HMGB1P30-201ENST00000492455 FABP12A6NFH5 140 aa1.28□□□□□ -2.2
HMGB1P30-201ENST00000492455 ARGFXA6NJG6 315 aa1.28□□□□□ -2.2
HMGB1P30-201ENST00000492455 TOR1AO14656 332 aa1.28□□□□□ -2.2
HMGB1P30-201ENST00000492455 LECT2O14960 151 aa1.28□□□□□ -2.2
HMGB1P30-201ENST00000492455 SLC31A1O15431 190 aa1.28□□□□□ -2.2
HMGB1P30-201ENST00000492455 AQP9O43315 295 aa1.28□□□□□ -2.2
HMGB1P30-201ENST00000492455 SYNGR2O43760 224 aa1.28□□□□□ -2.2
HMGB1P30-201ENST00000492455 SH2D1AO60880 128 aa1.28□□□□□ -2.2
HMGB1P30-201ENST00000492455 CDK14O94921 469 aa1.28□□□□□ -2.2
HMGB1P30-201ENST00000492455 OPN1SWP03999 348 aa1.28□□□□□ -2.2
HMGB1P30-201ENST00000492455 GYPCP04921 128 aa1.28□□□□□ -2.2
HMGB1P30-201ENST00000492455 PSKH1P11801 424 aa1.28□□□□□ -2.2
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms