RNA–Protein interactions for RNA: ENST00000491659.5

USP39-217, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 3

Gene USP39, Length 648 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-217ENST00000491659 FAM90A7PA6NKC0 464 aa12.11□□□□□ -0.47
USP39-217ENST00000491659 FAM90A12PA8MX19 464 aa12.11□□□□□ -0.47
USP39-217ENST00000491659 FAM90A5PA8MXJ8 464 aa12.11□□□□□ -0.47
USP39-217ENST00000491659 FAM90A23PA8MXZ1 464 aa12.11□□□□□ -0.47
USP39-217ENST00000491659 J3QR06 171 aa12.11□□□□□ -0.47
USP39-217ENST00000491659 AIPO00170 330 aa12.11□□□□□ -0.47
USP39-217ENST00000491659 IGHV3-7P01780 117 aa12.11□□□□□ -0.47
USP39-217ENST00000491659 FAM90A15PP0C7V4 464 aa12.11□□□□□ -0.47
USP39-217ENST00000491659 FAM90A13PP0C7W8 464 aa12.11□□□□□ -0.47
USP39-217ENST00000491659 FAM90A14PP0C7W9 464 aa12.11□□□□□ -0.47
USP39-217ENST00000491659 FAM90A24PP0C7X0 464 aa12.11□□□□□ -0.47
USP39-217ENST00000491659 GZMHP20718 246 aa12.11□□□□□ -0.47
USP39-217ENST00000491659 HABP2Q14520 560 aaPredicted RBP12.11□□□□□ -0.47
USP39-217ENST00000491659 IRF3Q14653 427 aa12.11□□□□□ -0.47
USP39-217ENST00000491659 GLT8D1Q68CQ7 371 aa12.11□□□□□ -0.47
USP39-217ENST00000491659 RAB12Q6IQ22 244 aa12.11□□□□□ -0.47
USP39-217ENST00000491659 SLC16A12Q6ZSM3 486 aa12.11□□□□□ -0.47
USP39-217ENST00000491659 Q8N2B8 174 aa12.11□□□□□ -0.47
USP39-217ENST00000491659 RFESDQ8TAC1 157 aa12.11□□□□□ -0.47
USP39-217ENST00000491659 PHYHIPQ92561 330 aa12.11□□□□□ -0.47
USP39-217ENST00000491659 LEAP2Q969E1 77 aa12.11□□□□□ -0.47
USP39-217ENST00000491659 SLC25A33Q9BSK2 321 aa12.11□□□□□ -0.47
USP39-217ENST00000491659 CCDC90BQ9GZT6 254 aa12.11□□□□□ -0.47
USP39-217ENST00000491659 BANF2Q9H503 90 aa12.11□□□□□ -0.47
USP39-217ENST00000491659 LIN7BQ9HAP6 207 aa12.11□□□□□ -0.47
USP39-217ENST00000491659 RAB9BQ9NP90 201 aa12.11□□□□□ -0.47
USP39-217ENST00000491659 PSG11Q9UQ72 335 aa12.11□□□□□ -0.47
USP39-217ENST00000491659 LY6LH3BQJ8 138 aa12.1□□□□□ -0.47
USP39-217ENST00000491659 TSPAN15O95858 294 aa12.1□□□□□ -0.47
USP39-217ENST00000491659 CSF1P09603 554 aa12.1□□□□□ -0.47
USP39-217ENST00000491659 UBBP0CG47 229 aa12.1□□□□□ -0.47
USP39-217ENST00000491659 HSMCR30P0CW71 290 aa12.1□□□□□ -0.47
USP39-217ENST00000491659 CD24P25063 80 aa12.1□□□□□ -0.47
USP39-217ENST00000491659 VDAC2P45880 294 aaPredicted RBP12.1□□□□□ -0.47
USP39-217ENST00000491659 MADCAM1Q13477 382 aa12.1□□□□□ -0.47
USP39-217ENST00000491659 INSL4Q14641 139 aa12.1□□□□□ -0.47
USP39-217ENST00000491659 HSD17B12Q53GQ0 312 aa12.1□□□□□ -0.47
USP39-217ENST00000491659 UTF1Q5T230 341 aa12.1□□□□□ -0.47
USP39-217ENST00000491659 FAM27D1Q5T7N8 215 aa12.1□□□□□ -0.47
USP39-217ENST00000491659 LIPKQ5VXJ0 399 aa12.1□□□□□ -0.47
USP39-217ENST00000491659 UNQ9370/PRO34162Q6UXP9 181 aa12.1□□□□□ -0.47
USP39-217ENST00000491659 ZNF497Q6ZNH5 498 aa12.1□□□□□ -0.47
USP39-217ENST00000491659 CEACAM19Q7Z692 300 aa12.1□□□□□ -0.47
USP39-217ENST00000491659 LYPD6Q86Y78 171 aa12.1□□□□□ -0.47
USP39-217ENST00000491659 OR10X1Q8NGY0 326 aa12.1□□□□□ -0.47
USP39-217ENST00000491659 CCDC107Q8WV48 283 aa12.1□□□□□ -0.47
USP39-217ENST00000491659 ARL11Q969Q4 196 aa12.1□□□□□ -0.47
USP39-217ENST00000491659 FAM46BQ96A09 425 aa12.1□□□□□ -0.47
USP39-217ENST00000491659 DUSP21Q9H596 190 aa12.1□□□□□ -0.47
USP39-217ENST00000491659 SERTAD4Q9NUC0 356 aa12.1□□□□□ -0.47
USP39-217ENST00000491659 ETAA1Q9NY74 926 aa12.1□□□□□ -0.47
USP39-217ENST00000491659 SDCBPO00560 298 aaPredicted RBP12.09□□□□□ -0.47
USP39-217ENST00000491659 ORC5O43913 435 aa12.09□□□□□ -0.47
USP39-217ENST00000491659 FBXO24O75426 580 aa12.09□□□□□ -0.47
USP39-217ENST00000491659 OR2F2O95006 317 aa12.09□□□□□ -0.47
USP39-217ENST00000491659 TRAM1Q15629 374 aa12.09□□□□□ -0.47
USP39-217ENST00000491659 C6orf183Q5T699 404 aa12.09□□□□□ -0.47
USP39-217ENST00000491659 PRSS48Q7RTY5 328 aa12.09□□□□□ -0.47
USP39-217ENST00000491659 C11orf44Q8N8P7 122 aa12.09□□□□□ -0.47
USP39-217ENST00000491659 TMEM104Q8NE00 496 aa12.09□□□□□ -0.47
USP39-217ENST00000491659 OR52M1Q8NGK5 317 aa12.09□□□□□ -0.47
USP39-217ENST00000491659 CFHR4Q92496 578 aa12.09□□□□□ -0.47
USP39-217ENST00000491659 CNBD2Q96M20 576 aa12.09□□□□□ -0.47
USP39-217ENST00000491659 Q96M66 194 aa12.09□□□□□ -0.47
USP39-217ENST00000491659 TRAPPC2LQ9UL33 140 aa12.09□□□□□ -0.47
USP39-217ENST00000491659 BLOC1S6Q9UL45 172 aa12.09□□□□□ -0.47
USP39-217ENST00000491659 PEX16Q9Y5Y5 336 aa12.09□□□□□ -0.47
USP39-217ENST00000491659 TRRAPQ9Y4A5 3859 aa12.08□□□□□ -0.48
USP39-217ENST00000491659 C15orf65H3BRN8 121 aa12.08□□□□□ -0.48
USP39-217ENST00000491659 CA11O75493 328 aa12.08□□□□□ -0.48
USP39-217ENST00000491659 SC5DO75845 299 aa12.08□□□□□ -0.48
USP39-217ENST00000491659 MPIG6BO95866 241 aa12.08□□□□□ -0.48
USP39-217ENST00000491659 MT-ND4P03905 459 aa12.08□□□□□ -0.48
USP39-217ENST00000491659 SRMP19623 302 aa12.08□□□□□ -0.48
USP39-217ENST00000491659 FUT3P21217 361 aa12.08□□□□□ -0.48
USP39-217ENST00000491659 CRHBPP24387 322 aa12.08□□□□□ -0.48
USP39-217ENST00000491659 PSMA1P25786 263 aaKnown RBP12.08□□□□□ -0.48
USP39-217ENST00000491659 RAB7AP51149 207 aa12.08□□□□□ -0.48
USP39-217ENST00000491659 BLCAPP62952 87 aa12.08□□□□□ -0.48
USP39-217ENST00000491659 MLLT11Q13015 90 aaPredicted RBP12.08□□□□□ -0.48
USP39-217ENST00000491659 SYT6Q5T7P8 510 aaPredicted RBP12.08□□□□□ -0.48
USP39-217ENST00000491659 TRAT1Q6PIZ9 186 aa12.08□□□□□ -0.48
USP39-217ENST00000491659 LRRTM1Q86UE6 522 aa12.08□□□□□ -0.48
USP39-217ENST00000491659 RBM14Q96PK6 669 aaKnown RBP12.08□□□□□ -0.48
USP39-217ENST00000491659 ISYNA1Q9NPH2 558 aa12.08□□□□□ -0.48
USP39-217ENST00000491659 LRRC42Q9Y546 428 aa12.08□□□□□ -0.48
USP39-217ENST00000491659 A0A1W2PPE3 182 aa12.07□□□□□ -0.48
USP39-217ENST00000491659 M0QZK8 103 aa12.07□□□□□ -0.48
USP39-217ENST00000491659 SPINT2O43291 252 aa12.07□□□□□ -0.48
USP39-217ENST00000491659 PDCD6O75340 191 aa12.07□□□□□ -0.48
USP39-217ENST00000491659 GLAP06280 429 aa12.07□□□□□ -0.48
USP39-217ENST00000491659 UCHL1P09936 223 aa12.07□□□□□ -0.48
USP39-217ENST00000491659 FAM106CPP0CH98 169 aa12.07□□□□□ -0.48
USP39-217ENST00000491659 IL3RAP26951 378 aa12.07□□□□□ -0.48
USP39-217ENST00000491659 GP2P55259 537 aaKnown RBP12.07□□□□□ -0.48
USP39-217ENST00000491659 RPS25P62851 125 aaKnown RBP12.07□□□□□ -0.48
USP39-217ENST00000491659 TPBGQ13641 420 aa12.07□□□□□ -0.48
USP39-217ENST00000491659 TMEM95Q3KNT9 176 aa12.07□□□□□ -0.48
USP39-217ENST00000491659 TMEM30BQ3MIR4 351 aa12.07□□□□□ -0.48
USP39-217ENST00000491659 NKAPLQ5M9Q1 402 aa12.07□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms