RNA–Protein interactions for RNA: ENST00000490993.5

NPHP3-208, Transcript of nephrocystin 3, humanhuman

TSL 5

Gene NPHP3, Length 5,197 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP3-208ENST00000490993 RNF7Q9UBF6 113 aa6.3□□□□□ -1.4
NPHP3-208ENST00000490993 LPAR3Q9UBY5 353 aa6.3□□□□□ -1.4
NPHP3-208ENST00000490993 LIPGQ9Y5X9 500 aa6.3□□□□□ -1.4
NPHP3-208ENST00000490993 RP1P56715 2156 aa6.3□□□□□ -1.4
NPHP3-208ENST00000490993 RALGAPA1Q6GYQ0 2036 aa6.3□□□□□ -1.4
NPHP3-208ENST00000490993 TRGV8A0A0C4DH27 118 aa6.3□□□□□ -1.4
NPHP3-208ENST00000490993 ERVH48-1M5A8F1 160 aa6.3□□□□□ -1.4
NPHP3-208ENST00000490993 SHOXO15266 292 aa6.3□□□□□ -1.4
NPHP3-208ENST00000490993 CD80P33681 288 aa6.3□□□□□ -1.4
NPHP3-208ENST00000490993 SNCAP37840 140 aa6.3□□□□□ -1.4
NPHP3-208ENST00000490993 RND3P61587 244 aa6.3□□□□□ -1.4
NPHP3-208ENST00000490993 TMEM187Q14656 261 aa6.3□□□□□ -1.4
NPHP3-208ENST00000490993 BPIFCQ8NFQ6 507 aa6.3□□□□□ -1.4
NPHP3-208ENST00000490993 KLF14Q8TD94 323 aaPredicted RBP6.3□□□□□ -1.4
NPHP3-208ENST00000490993 H1FXQ92522 213 aaKnown RBP6.3□□□□□ -1.4
NPHP3-208ENST00000490993 WBP1Q96G27 269 aa6.3□□□□□ -1.4
NPHP3-208ENST00000490993 ADTRPQ96IZ2 230 aa6.3□□□□□ -1.4
NPHP3-208ENST00000490993 RSRP1Q9BUV0 290 aa6.3□□□□□ -1.4
NPHP3-208ENST00000490993 IAPPP10997 89 aa6.3□□□□□ -1.4
NPHP3-208ENST00000490993 F2RP25116 425 aa6.3□□□□□ -1.4
NPHP3-208ENST00000490993 NPBWR2P48146 333 aa6.3□□□□□ -1.4
NPHP3-208ENST00000490993 UBE2KP61086 200 aa6.3□□□□□ -1.4
NPHP3-208ENST00000490993 ALKBH6Q3KRA9 238 aa6.3□□□□□ -1.4
NPHP3-208ENST00000490993 MRGPRDQ8TDS7 321 aa6.3□□□□□ -1.4
NPHP3-208ENST00000490993 ZNF488Q96MN9 340 aa6.3□□□□□ -1.4
NPHP3-208ENST00000490993 HSD17B10Q99714 261 aaKnown RBP6.3□□□□□ -1.4
NPHP3-208ENST00000490993 NIPSNAP3BQ9BS92 247 aa6.3□□□□□ -1.4
NPHP3-208ENST00000490993 PARP11Q9NR21 331 aa6.3□□□□□ -1.4
NPHP3-208ENST00000490993 CACNG5Q9UF02 275 aa6.3□□□□□ -1.4
NPHP3-208ENST00000490993 CACNA1IQ9P0X4 2223 aa6.3□□□□□ -1.4
NPHP3-208ENST00000490993 NKX2-6A6NCS4 301 aa6.3□□□□□ -1.4
NPHP3-208ENST00000490993 FAM24AA6NFZ4 105 aa6.3□□□□□ -1.4
NPHP3-208ENST00000490993 C16orf97H3BN30 126 aa6.3□□□□□ -1.4
NPHP3-208ENST00000490993 HEXAP06865 529 aa6.3□□□□□ -1.4
NPHP3-208ENST00000490993 THNSL2Q86YJ6 484 aa6.3□□□□□ -1.4
NPHP3-208ENST00000490993 OR5C1Q8NGR4 320 aa6.3□□□□□ -1.4
NPHP3-208ENST00000490993 hADV38S2A0JD32 116 aa6.29□□□□□ -1.4
NPHP3-208ENST00000490993 SCTP09683 121 aa6.29□□□□□ -1.4
NPHP3-208ENST00000490993 PSMB3P49720 205 aa6.29□□□□□ -1.4
NPHP3-208ENST00000490993 ZNF816Q0VGE8 651 aaPredicted RBP6.29□□□□□ -1.4
NPHP3-208ENST00000490993 LRRC10Q5BKY1 277 aa6.29□□□□□ -1.4
NPHP3-208ENST00000490993 TIMD4Q96H15 378 aa6.29□□□□□ -1.4
NPHP3-208ENST00000490993 ATP5SQ99766 215 aa6.29□□□□□ -1.4
NPHP3-208ENST00000490993 GAL3ST2Q9H3Q3 398 aa6.29□□□□□ -1.4
NPHP3-208ENST00000490993 TREM2Q9NZC2 230 aa6.29□□□□□ -1.4
NPHP3-208ENST00000490993 WIPI2Q9Y4P8 454 aa6.29□□□□□ -1.4
NPHP3-208ENST00000490993 OR5H1A6NKK0 313 aa6.29□□□□□ -1.4
NPHP3-208ENST00000490993 IQCF6A8MYZ5 107 aa6.29□□□□□ -1.4
NPHP3-208ENST00000490993 SYNGR2O43760 224 aa6.29□□□□□ -1.4
NPHP3-208ENST00000490993 POLR2GP62487 172 aaKnown RBP eCLIP6.29□□□□□ -1.4
NPHP3-208ENST00000490993 ASCL4Q6XD76 172 aa6.29□□□□□ -1.4
NPHP3-208ENST00000490993 CALHM1Q8IU99 346 aa6.29□□□□□ -1.4
NPHP3-208ENST00000490993 DEFB108BQ8NET1 73 aa6.29□□□□□ -1.4
NPHP3-208ENST00000490993 RND1Q92730 232 aa6.29□□□□□ -1.4
NPHP3-208ENST00000490993 OR10C1Q96KK4 312 aa6.29□□□□□ -1.4
NPHP3-208ENST00000490993 ZDHHC11Q9H8X9 412 aa6.29□□□□□ -1.4
NPHP3-208ENST00000490993 OR5AC2Q9NZP5 309 aa6.29□□□□□ -1.4
NPHP3-208ENST00000490993 SPRR3Q9UBC9 169 aa6.29□□□□□ -1.4
NPHP3-208ENST00000490993 PSG11Q9UQ72 335 aa6.29□□□□□ -1.4
NPHP3-208ENST00000490993 NUPL2O15504 423 aaKnown RBP6.29□□□□□ -1.4
NPHP3-208ENST00000490993 NDUFB3O43676 98 aa6.29□□□□□ -1.4
NPHP3-208ENST00000490993 PITX3O75364 302 aa6.29□□□□□ -1.4
NPHP3-208ENST00000490993 CFDP00746 253 aaPredicted RBP6.29□□□□□ -1.4
NPHP3-208ENST00000490993 IGHV1-2P23083 117 aa6.29□□□□□ -1.4
NPHP3-208ENST00000490993 EWSR1Q01844 656 aaKnown RBP eCLIP6.29□□□□□ -1.4
NPHP3-208ENST00000490993 HNF4GQ14541 408 aa6.29□□□□□ -1.4
NPHP3-208ENST00000490993 OR2B11Q5JQS5 317 aa6.29□□□□□ -1.4
NPHP3-208ENST00000490993 RNF166Q96A37 237 aaPredicted RBP6.29□□□□□ -1.4
NPHP3-208ENST00000490993 ACTR3CQ9C0K3 210 aaPredicted RBP6.29□□□□□ -1.4
NPHP3-208ENST00000490993 FAM234AQ9H0X4 552 aa6.29□□□□□ -1.4
NPHP3-208ENST00000490993 PLEKHA3Q9HB20 300 aa6.29□□□□□ -1.4
NPHP3-208ENST00000490993 BIN3Q9NQY0 253 aa6.29□□□□□ -1.4
NPHP3-208ENST00000490993 TRAV38-1A0A0B4J264 116 aa6.29□□□□□ -1.4
NPHP3-208ENST00000490993 MFSD2BA6NFX1 497 aa6.29□□□□□ -1.4
NPHP3-208ENST00000490993 SOX15O60248 233 aa6.29□□□□□ -1.4
NPHP3-208ENST00000490993 CST7O76096 145 aa6.29□□□□□ -1.4
NPHP3-208ENST00000490993 HRASP01112 189 aa6.29□□□□□ -1.4
NPHP3-208ENST00000490993 HKR1P10072 659 aa6.29□□□□□ -1.4
NPHP3-208ENST00000490993 COX5AP20674 150 aa6.29□□□□□ -1.4
NPHP3-208ENST00000490993 PRDX2P32119 198 aa6.29□□□□□ -1.4
NPHP3-208ENST00000490993 SUB1P53999 127 aaKnown RBP eCLIP6.29□□□□□ -1.4
NPHP3-208ENST00000490993 C2orf68Q2NKX9 166 aa6.29□□□□□ -1.4
NPHP3-208ENST00000490993 ACOT6Q3I5F7 207 aaPredicted RBP6.29□□□□□ -1.4
NPHP3-208ENST00000490993 ACSF3Q4G176 576 aaPredicted RBP6.29□□□□□ -1.4
NPHP3-208ENST00000490993 TIMM23BQ5SRD1 257 aa6.29□□□□□ -1.4
NPHP3-208ENST00000490993 DPPA3Q6W0C5 159 aa6.29□□□□□ -1.4
NPHP3-208ENST00000490993 FGFBP3Q8TAT2 258 aa6.29□□□□□ -1.4
NPHP3-208ENST00000490993 ASXL3Q9C0F0 2248 aa6.29□□□□□ -1.4
NPHP3-208ENST00000490993 LRP4O75096 1905 aa6.29□□□□□ -1.4
NPHP3-208ENST00000490993 IFNL4K9M1U5 179 aa6.29□□□□□ -1.4
NPHP3-208ENST00000490993 M0R1X1 148 aa6.29□□□□□ -1.4
NPHP3-208ENST00000490993 MGST3O14880 152 aa6.29□□□□□ -1.4
NPHP3-208ENST00000490993 SULT1A1P50225 295 aa6.29□□□□□ -1.4
NPHP3-208ENST00000490993 COL10A1Q03692 680 aa6.29□□□□□ -1.4
NPHP3-208ENST00000490993 AKR1C1Q04828 323 aa6.29□□□□□ -1.4
NPHP3-208ENST00000490993 SRSF4Q08170 494 aaKnown RBP6.29□□□□□ -1.4
NPHP3-208ENST00000490993 MIDNQ504T8 468 aa6.29□□□□□ -1.4
NPHP3-208ENST00000490993 AVPI1Q5T686 147 aa6.29□□□□□ -1.4
NPHP3-208ENST00000490993 LHFPL1Q86WI0 220 aa6.29□□□□□ -1.4
NPHP3-208ENST00000490993 OR10Z1Q8NGY1 313 aa6.29□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms