RNA–Protein interactions for RNA: ENST00000490833.5

FN1-223, Transcript of fibronectin 1, human

TSL 3

Gene FN1, Length 699 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
FN1-223	ENST00000490833	CXorf58	Q96LI9	332 aa		5.42	□□□□□ -1.54
FN1-223	ENST00000490833	LINC00052	Q96N35	136 aa		5.42	□□□□□ -1.54
FN1-223	ENST00000490833	PARD6G	Q9BYG4	376 aa	Predicted RBP	5.42	□□□□□ -1.54
FN1-223	ENST00000490833	OR2S2	Q9NQN1	319 aa		5.42	□□□□□ -1.54
FN1-223	ENST00000490833	SMCO4	Q9NRQ5	59 aa		5.42	□□□□□ -1.54
FN1-223	ENST00000490833	LYRM2	Q9NU23	88 aa	Predicted RBP	5.42	□□□□□ -1.54
FN1-223	ENST00000490833	ASF1B	Q9NVP2	202 aa		5.42	□□□□□ -1.54
FN1-223	ENST00000490833	MTCH1	Q9NZJ7	389 aa		5.42	□□□□□ -1.54
FN1-223	ENST00000490833	OR5AC2	Q9NZP5	309 aa		5.42	□□□□□ -1.54
FN1-223	ENST00000490833	GPR160	Q9UJ42	338 aa		5.42	□□□□□ -1.54
FN1-223	ENST00000490833	PURG	Q9UJV8	347 aa	Known RBP	5.42	□□□□□ -1.54
FN1-223	ENST00000490833	TRAPPC2L	Q9UL33	140 aa		5.42	□□□□□ -1.54
FN1-223	ENST00000490833	WIPI2	Q9Y4P8	454 aa		5.42	□□□□□ -1.54
FN1-223	ENST00000490833	LSM5	Q9Y4Y9	91 aa	Known RBP	5.42	□□□□□ -1.54
FN1-223	ENST00000490833	RBM7	Q9Y580	266 aa	Known RBP	5.42	□□□□□ -1.54
FN1-223	ENST00000490833	SDK1	Q7Z5N4	2213 aa		5.42	□□□□□ -1.54
FN1-223	ENST00000490833	NCOA6	Q14686	2063 aa	Predicted RBP	5.41	□□□□□ -1.54
FN1-223	ENST00000490833	TMEM30CP	A0ZSE6	113 aa		5.41	□□□□□ -1.54
FN1-223	ENST00000490833	ARGFX	A6NJG6	315 aa		5.41	□□□□□ -1.54
FN1-223	ENST00000490833	FAM90A9P	A6NNJ1	464 aa		5.41	□□□□□ -1.54
FN1-223	ENST00000490833		B4DEV8	164 aa		5.41	□□□□□ -1.54
FN1-223	ENST00000490833	ANKHD1-EIF4EBP3	H7C0V5	636 aa	Predicted RBP	5.41	□□□□□ -1.54
FN1-223	ENST00000490833	TSPAN4	O14817	238 aa		5.41	□□□□□ -1.54
FN1-223	ENST00000490833	TGOLN2	O43493	480 aa		5.41	□□□□□ -1.54
FN1-223	ENST00000490833	FBXO24	O75426	580 aa		5.41	□□□□□ -1.54
FN1-223	ENST00000490833	NXPH2	O95156	264 aa		5.41	□□□□□ -1.54
FN1-223	ENST00000490833	PLAT	P00750	562 aa		5.41	□□□□□ -1.54
FN1-223	ENST00000490833	IGKV3-15	P01624	115 aa		5.41	□□□□□ -1.54
FN1-223	ENST00000490833	CD5	P06127	495 aa		5.41	□□□□□ -1.54
FN1-223	ENST00000490833	OR8U9	P0C7N5	309 aa		5.41	□□□□□ -1.54
FN1-223	ENST00000490833	PATE4	P0C8F1	98 aa		5.41	□□□□□ -1.54
FN1-223	ENST00000490833	PGA5	P0DJD9	388 aa		5.41	□□□□□ -1.54
FN1-223	ENST00000490833	ZNF44	P15621	663 aa		5.41	□□□□□ -1.54
FN1-223	ENST00000490833	ZNF14	P17017	642 aa	Predicted RBP	5.41	□□□□□ -1.54
FN1-223	ENST00000490833	PI3	P19957	117 aa		5.41	□□□□□ -1.54
FN1-223	ENST00000490833	BCL3	P20749	454 aa		5.41	□□□□□ -1.54
FN1-223	ENST00000490833	KITLG	P21583	273 aa		5.41	□□□□□ -1.54
FN1-223	ENST00000490833	CAMLG	P49069	296 aa		5.41	□□□□□ -1.54
FN1-223	ENST00000490833	ERVK11-1	P61568	191 aa		5.41	□□□□□ -1.54
FN1-223	ENST00000490833	HGFAC	Q04756	655 aa		5.41	□□□□□ -1.54
FN1-223	ENST00000490833	PMS2P11	Q13670	270 aa		5.41	□□□□□ -1.54
FN1-223	ENST00000490833	ZNF273	Q14593	569 aa		5.41	□□□□□ -1.54
FN1-223	ENST00000490833	RHEB	Q15382	184 aa		5.41	□□□□□ -1.54
FN1-223	ENST00000490833	LPAL2	Q16609	132 aa		5.41	□□□□□ -1.54
FN1-223	ENST00000490833	SMIM21	Q3B7S5	101 aa		5.41	□□□□□ -1.54
FN1-223	ENST00000490833	RNF212	Q495C1	297 aa		5.41	□□□□□ -1.54
FN1-223	ENST00000490833	PHLDA2	Q53GA4	152 aa		5.41	□□□□□ -1.54
FN1-223	ENST00000490833	BEX5	Q5H9J7	111 aa		5.41	□□□□□ -1.54
FN1-223	ENST00000490833	FAM209A	Q5JX71	171 aa		5.41	□□□□□ -1.54
FN1-223	ENST00000490833	MBNL2	Q5VZF2	373 aa	Known RBP	5.41	□□□□□ -1.54
FN1-223	ENST00000490833	BTNL8	Q6UX41	500 aa		5.41	□□□□□ -1.54
FN1-223	ENST00000490833	ZNF66	Q6ZN08	573 aa		5.41	□□□□□ -1.54
FN1-223	ENST00000490833	ZNF497	Q6ZNH5	498 aa		5.41	□□□□□ -1.54
FN1-223	ENST00000490833	LYZL2	Q7Z4W2	148 aa		5.41	□□□□□ -1.54
FN1-223	ENST00000490833	H1FOO	Q8IZA3	346 aa	Predicted RBP	5.41	□□□□□ -1.54
FN1-223	ENST00000490833	SELENOH	Q8IZQ5	122 aa	Known RBP	5.41	□□□□□ -1.54
FN1-223	ENST00000490833	RELL2	Q8NC24	303 aa	Predicted RBP	5.41	□□□□□ -1.54
FN1-223	ENST00000490833	OR1S2	Q8NGQ3	325 aa		5.41	□□□□□ -1.54
FN1-223	ENST00000490833	RNASE11	Q8TAA1	199 aa	Known RBP	5.41	□□□□□ -1.54
FN1-223	ENST00000490833	SECTM1	Q8WVN6	248 aa		5.41	□□□□□ -1.54
FN1-223	ENST00000490833	LURAP1	Q96LR2	239 aa		5.41	□□□□□ -1.54
FN1-223	ENST00000490833	NRIP2	Q9BQI9	281 aa		5.41	□□□□□ -1.54
FN1-223	ENST00000490833	ZNF552	Q9H707	407 aa	Predicted RBP	5.41	□□□□□ -1.54
FN1-223	ENST00000490833	KCNJ16	Q9NPI9	418 aa		5.41	□□□□□ -1.54
FN1-223	ENST00000490833	MBNL3	Q9NUK0	354 aa	Known RBP	5.41	□□□□□ -1.54
FN1-223	ENST00000490833	PLA2G3	Q9NZ20	509 aa		5.41	□□□□□ -1.54
FN1-223	ENST00000490833	CLCF1	Q9UBD9	225 aa		5.41	□□□□□ -1.54
FN1-223	ENST00000490833	FBXL17	Q9UF56	701 aa		5.41	□□□□□ -1.54
FN1-223	ENST00000490833	SPTBN5	Q9NRC6	3674 aa	Known RBP	5.41	□□□□□ -1.54
FN1-223	ENST00000490833	PHF3	Q92576	2039 aa	Known RBP	5.41	□□□□□ -1.54
FN1-223	ENST00000490833	CDH23	Q9H251	3354 aa		5.4	□□□□□ -1.54
FN1-223	ENST00000490833	TRAV1-1	A0A0B4J248	108 aa		5.4	□□□□□ -1.54
FN1-223	ENST00000490833	CXorf65	A6NEN9	183 aa		5.4	□□□□□ -1.54
FN1-223	ENST00000490833	ITGB1BP1	O14713	200 aa		5.4	□□□□□ -1.54
FN1-223	ENST00000490833	SPINT2	O43291	252 aa		5.4	□□□□□ -1.54
FN1-223	ENST00000490833	PGLYRP1	O75594	196 aa	Predicted RBP	5.4	□□□□□ -1.54
FN1-223	ENST00000490833	CEACAM4	O75871	244 aa		5.4	□□□□□ -1.54
FN1-223	ENST00000490833	TSPAN9	O75954	239 aa		5.4	□□□□□ -1.54
FN1-223	ENST00000490833	SCGB1D2	O95969	90 aa		5.4	□□□□□ -1.54
FN1-223	ENST00000490833	IL18BP	O95998	194 aa		5.4	□□□□□ -1.54
FN1-223	ENST00000490833	IFNA1	P01562	189 aa		5.4	□□□□□ -1.54
FN1-223	ENST00000490833	ATF4	P18848	351 aa	Predicted RBP	5.4	□□□□□ -1.54
FN1-223	ENST00000490833	COX5A	P20674	150 aa		5.4	□□□□□ -1.54
FN1-223	ENST00000490833	KIR2DS2	P43631	304 aa		5.4	□□□□□ -1.54
FN1-223	ENST00000490833	NPBWR2	P48146	333 aa		5.4	□□□□□ -1.54
FN1-223	ENST00000490833	SULT1A1	P50225	295 aa		5.4	□□□□□ -1.54
FN1-223	ENST00000490833	PPT1	P50897	306 aa		5.4	□□□□□ -1.54
FN1-223	ENST00000490833	ATP5I	P56385	69 aa	Predicted RBP	5.4	□□□□□ -1.54
FN1-223	ENST00000490833	HTD2	P86397	168 aa		5.4	□□□□□ -1.54
FN1-223	ENST00000490833	AKR1C8P	Q5T2L2	129 aa		5.4	□□□□□ -1.54
FN1-223	ENST00000490833	RPL7L1	Q6DKI1	246 aa	Known RBP	5.4	□□□□□ -1.54
FN1-223	ENST00000490833	DHRS7B	Q6IAN0	325 aa	Predicted RBP	5.4	□□□□□ -1.54
FN1-223	ENST00000490833	SLC25A24	Q6NUK1	477 aa		5.4	□□□□□ -1.54
FN1-223	ENST00000490833	MDP1	Q86V88	176 aa		5.4	□□□□□ -1.54
FN1-223	ENST00000490833	SLC35G3	Q8N808	338 aa		5.4	□□□□□ -1.54
FN1-223	ENST00000490833	C15orf54	Q8N8G6	183 aa		5.4	□□□□□ -1.54
FN1-223	ENST00000490833	OR10G4	Q8NGN3	311 aa		5.4	□□□□□ -1.54
FN1-223	ENST00000490833	OR1J1	Q8NGS3	322 aa		5.4	□□□□□ -1.54
FN1-223	ENST00000490833	FGFBP3	Q8TAT2	258 aa		5.4	□□□□□ -1.54
FN1-223	ENST00000490833	MRPL30	Q8TCC3	161 aa	Known RBP	5.4	□□□□□ -1.54

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