RNA–Protein interactions for RNA: ENST00000490609.1

COL2A1-207, Transcript of collagen type II alpha 1 chain, humanhuman

TSL 2

Gene COL2A1, Length 679 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL2A1-207ENST00000490609 SLC31A2O15432 143 aa12.16□□□□□ -0.46
COL2A1-207ENST00000490609 OCM2P0CE71 109 aa12.16□□□□□ -0.46
COL2A1-207ENST00000490609 OCMP0CE72 109 aaPredicted RBP12.16□□□□□ -0.46
COL2A1-207ENST00000490609 CDX1P47902 265 aaPredicted RBP12.16□□□□□ -0.46
COL2A1-207ENST00000490609 ZNF134P52741 427 aa12.16□□□□□ -0.46
COL2A1-207ENST00000490609 F2RL1P55085 397 aa12.16□□□□□ -0.46
COL2A1-207ENST00000490609 KIR2DS1Q14954 304 aa12.16□□□□□ -0.46
COL2A1-207ENST00000490609 TGIF2LXQ8IUE1 241 aa12.16□□□□□ -0.46
COL2A1-207ENST00000490609 COMMD1Q8N668 190 aa12.16□□□□□ -0.46
COL2A1-207ENST00000490609 OR5AK2Q8NH90 309 aa12.16□□□□□ -0.46
COL2A1-207ENST00000490609 RHOXF1Q8NHV9 184 aa12.16□□□□□ -0.46
COL2A1-207ENST00000490609 TNFAIP8L1Q8WVP5 186 aa12.16□□□□□ -0.46
COL2A1-207ENST00000490609 PYDC1Q8WXC3 89 aa12.16□□□□□ -0.46
COL2A1-207ENST00000490609 ORAI1Q96D31 301 aa12.16□□□□□ -0.46
COL2A1-207ENST00000490609 IMPAD1Q9NX62 359 aa12.16□□□□□ -0.46
COL2A1-207ENST00000490609 TAS2R4Q9NYW5 299 aa12.16□□□□□ -0.46
COL2A1-207ENST00000490609 SIRT4Q9Y6E7 314 aaPredicted RBP12.16□□□□□ -0.46
COL2A1-207ENST00000490609 HYDINQ4G0P3 5121 aa12.16□□□□□ -0.46
COL2A1-207ENST00000490609 A0A1W2PP11 408 aa12.15□□□□□ -0.46
COL2A1-207ENST00000490609 TMEM212A6NML5 194 aa12.15□□□□□ -0.46
COL2A1-207ENST00000490609 CCRL2O00421 344 aa12.15□□□□□ -0.46
COL2A1-207ENST00000490609 LIMS3P0CW19 117 aa12.15□□□□□ -0.46
COL2A1-207ENST00000490609 LIMS4P0CW20 117 aa12.15□□□□□ -0.46
COL2A1-207ENST00000490609 PNLIPRP3Q17RR3 467 aa12.15□□□□□ -0.46
COL2A1-207ENST00000490609 NHLRC3Q5JS37 347 aa12.15□□□□□ -0.46
COL2A1-207ENST00000490609 TEX38Q6PEX7 206 aa12.15□□□□□ -0.46
COL2A1-207ENST00000490609 MOB3BQ86TA1 216 aa12.15□□□□□ -0.46
COL2A1-207ENST00000490609 FAM71E2Q8N5Q1 922 aa12.15□□□□□ -0.46
COL2A1-207ENST00000490609 ZNF439Q8NDP4 499 aa12.15□□□□□ -0.46
COL2A1-207ENST00000490609 OR10X1Q8NGY0 326 aa12.15□□□□□ -0.46
COL2A1-207ENST00000490609 RTN4IP1Q8WWV3 396 aaPredicted RBP12.15□□□□□ -0.46
COL2A1-207ENST00000490609 DPF1Q92782 380 aa12.15□□□□□ -0.46
COL2A1-207ENST00000490609 JAM3Q9BX67 310 aa12.15□□□□□ -0.46
COL2A1-207ENST00000490609 LIN7CQ9NUP9 197 aaKnown RBP12.15□□□□□ -0.46
COL2A1-207ENST00000490609 MRPS18AQ9NVS2 196 aaKnown RBP12.15□□□□□ -0.46
COL2A1-207ENST00000490609 IGHV3-43A0A0B4J1X8 118 aa12.14□□□□□ -0.47
COL2A1-207ENST00000490609 AP4M1O00189 453 aa12.14□□□□□ -0.47
COL2A1-207ENST00000490609 GEMIN2O14893 280 aaKnown RBP12.14□□□□□ -0.47
COL2A1-207ENST00000490609 HTR3BO95264 441 aa12.14□□□□□ -0.47
COL2A1-207ENST00000490609 GAPDHP04406 335 aaKnown RBP12.14□□□□□ -0.47
COL2A1-207ENST00000490609 NHLRC4P0CG21 123 aaPredicted RBP12.14□□□□□ -0.47
COL2A1-207ENST00000490609 IGHV3-43DP0DP04 118 aa12.14□□□□□ -0.47
COL2A1-207ENST00000490609 SOX2P48431 317 aa12.14□□□□□ -0.47
COL2A1-207ENST00000490609 KCNJ3P48549 501 aa12.14□□□□□ -0.47
COL2A1-207ENST00000490609 RBM11P57052 281 aaKnown RBP12.14□□□□□ -0.47
COL2A1-207ENST00000490609 SLC35B1P78383 322 aa12.14□□□□□ -0.47
COL2A1-207ENST00000490609 FHL3Q13643 280 aa12.14□□□□□ -0.47
COL2A1-207ENST00000490609 ASPHD1Q5U4P2 390 aa12.14□□□□□ -0.47
COL2A1-207ENST00000490609 C5orf24Q7Z6I8 188 aa12.14□□□□□ -0.47
COL2A1-207ENST00000490609 SATL1Q86VE3 508 aa12.14□□□□□ -0.47
COL2A1-207ENST00000490609 FOXRED2Q8IWF2 684 aa12.14□□□□□ -0.47
COL2A1-207ENST00000490609 C8orf31Q8N9H6 132 aa12.14□□□□□ -0.47
COL2A1-207ENST00000490609 OR52M1Q8NGK5 317 aa12.14□□□□□ -0.47
COL2A1-207ENST00000490609 OR52I1Q8NGK6 324 aa12.14□□□□□ -0.47
COL2A1-207ENST00000490609 MYOZ3Q8TDC0 251 aa12.14□□□□□ -0.47
COL2A1-207ENST00000490609 APH1BQ8WW43 257 aa12.14□□□□□ -0.47
COL2A1-207ENST00000490609 S1PR3Q99500 378 aa12.14□□□□□ -0.47
COL2A1-207ENST00000490609 GFOD1Q9NXC2 390 aa12.14□□□□□ -0.47
COL2A1-207ENST00000490609 IL36GQ9NZH8 169 aa12.14□□□□□ -0.47
COL2A1-207ENST00000490609 DHDHQ9UQ10 334 aa12.14□□□□□ -0.47
COL2A1-207ENST00000490609 ST3GAL6Q9Y274 331 aa12.14□□□□□ -0.47
COL2A1-207ENST00000490609 U3KQK5 164 aa12.14□□□□□ -0.47
COL2A1-207ENST00000490609 RAMP3O60896 148 aa12.13□□□□□ -0.47
COL2A1-207ENST00000490609 IGHG4P01861 327 aa12.13□□□□□ -0.47
COL2A1-207ENST00000490609 MT-ND4P03905 459 aa12.13□□□□□ -0.47
COL2A1-207ENST00000490609 RAB3AP20336 220 aa12.13□□□□□ -0.47
COL2A1-207ENST00000490609 GZMHP20718 246 aa12.13□□□□□ -0.47
COL2A1-207ENST00000490609 ALDH3A2P51648 485 aa12.13□□□□□ -0.47
COL2A1-207ENST00000490609 FOXE3Q13461 319 aa12.13□□□□□ -0.47
COL2A1-207ENST00000490609 GPR50Q13585 617 aa12.13□□□□□ -0.47
COL2A1-207ENST00000490609 RSU1Q15404 277 aa12.13□□□□□ -0.47
COL2A1-207ENST00000490609 UNQ9370/PRO34162Q6UXP9 181 aa12.13□□□□□ -0.47
COL2A1-207ENST00000490609 OR2T10Q8NGZ9 312 aa12.13□□□□□ -0.47
COL2A1-207ENST00000490609 CCDC107Q8WV48 283 aa12.13□□□□□ -0.47
COL2A1-207ENST00000490609 ARL11Q969Q4 196 aa12.13□□□□□ -0.47
COL2A1-207ENST00000490609 RITA1Q96K30 269 aa12.13□□□□□ -0.47
COL2A1-207ENST00000490609 SLC29A1Q99808 456 aa12.13□□□□□ -0.47
COL2A1-207ENST00000490609 ASCL2Q99929 193 aa12.13□□□□□ -0.47
COL2A1-207ENST00000490609 MAGEA13PA6NCF6 341 aa12.12□□□□□ -0.47
COL2A1-207ENST00000490609 NCBP2LA6PVI3 153 aaKnown RBP12.12□□□□□ -0.47
COL2A1-207ENST00000490609 PSMB8P28062 276 aa12.12□□□□□ -0.47
COL2A1-207ENST00000490609 CD1BP29016 333 aa12.12□□□□□ -0.47
COL2A1-207ENST00000490609 ZNF137PP52743 207 aa12.12□□□□□ -0.47
COL2A1-207ENST00000490609 KLHL22Q53GT1 634 aa12.12□□□□□ -0.47
COL2A1-207ENST00000490609 CT45A1Q5HYN5 189 aa12.12□□□□□ -0.47
COL2A1-207ENST00000490609 ZNF497Q6ZNH5 498 aa12.12□□□□□ -0.47
COL2A1-207ENST00000490609 CBR4Q8N4T8 237 aa12.12□□□□□ -0.47
COL2A1-207ENST00000490609 OR52N1Q8NH53 320 aa12.12□□□□□ -0.47
COL2A1-207ENST00000490609 CT45A3Q8NHU0 189 aa12.12□□□□□ -0.47
COL2A1-207ENST00000490609 TSEN15Q8WW01 171 aaKnown RBP12.12□□□□□ -0.47
COL2A1-207ENST00000490609 KLK15Q9H2R5 256 aa12.12□□□□□ -0.47
COL2A1-207ENST00000490609 C12orf77C9JDV5 145 aa12.11□□□□□ -0.47
COL2A1-207ENST00000490609 SDCBPO00560 298 aaPredicted RBP12.11□□□□□ -0.47
COL2A1-207ENST00000490609 ORC5O43913 435 aa12.11□□□□□ -0.47
COL2A1-207ENST00000490609 OR7C1O76099 320 aaPredicted RBP12.11□□□□□ -0.47
COL2A1-207ENST00000490609 MOSP00540 346 aa12.11□□□□□ -0.47
COL2A1-207ENST00000490609 LALBAP00709 142 aa12.11□□□□□ -0.47
COL2A1-207ENST00000490609 IGF1P05019 195 aa12.11□□□□□ -0.47
COL2A1-207ENST00000490609 ELANEP08246 267 aa12.11□□□□□ -0.47
COL2A1-207ENST00000490609 IGFBP3P17936 291 aaPredicted RBP12.11□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms