RNA–Protein interactions for RNA: ENST00000489927.1

PLOD3-216, Transcript of procollagen-lysine,2-oxoglutarate 5-dioxygenase 3, humanhuman

TSL 2

Gene PLOD3, Length 562 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PLOD3-216ENST00000489927 RYR2Q92736 4967 aa12.43□□□□□ -0.42
PLOD3-216ENST00000489927 HUWE1Q7Z6Z7 4374 aaKnown RBP12.43□□□□□ -0.42
PLOD3-216ENST00000489927 MPZL2O60487 215 aa12.43□□□□□ -0.42
PLOD3-216ENST00000489927 HTR3BO95264 441 aa12.43□□□□□ -0.42
PLOD3-216ENST00000489927 ALPLP05186 524 aa12.43□□□□□ -0.42
PLOD3-216ENST00000489927 ECI1P42126 302 aa12.43□□□□□ -0.42
PLOD3-216ENST00000489927 CDX1P47902 265 aaPredicted RBP12.43□□□□□ -0.42
PLOD3-216ENST00000489927 FOXE3Q13461 319 aa12.43□□□□□ -0.42
PLOD3-216ENST00000489927 FAM53AQ6NSI3 398 aaPredicted RBP12.43□□□□□ -0.42
PLOD3-216ENST00000489927 ZNF529Q6P280 563 aa12.43□□□□□ -0.42
PLOD3-216ENST00000489927 SYS1Q8N2H4 156 aa12.43□□□□□ -0.42
PLOD3-216ENST00000489927 RNF152Q8N8N0 203 aa12.43□□□□□ -0.42
PLOD3-216ENST00000489927 TMEM104Q8NE00 496 aa12.43□□□□□ -0.42
PLOD3-216ENST00000489927 UBALD1Q8TB05 177 aa12.43□□□□□ -0.42
PLOD3-216ENST00000489927 RBMXL1Q96E39 390 aaKnown RBP12.43□□□□□ -0.42
PLOD3-216ENST00000489927 MRPL48Q96GC5 212 aaKnown RBP12.43□□□□□ -0.42
PLOD3-216ENST00000489927 ASCL2Q99929 193 aa12.43□□□□□ -0.42
PLOD3-216ENST00000489927 PLSCR3Q9NRY6 295 aa12.43□□□□□ -0.42
PLOD3-216ENST00000489927 SCOCQ9UIL1 159 aa12.43□□□□□ -0.42
PLOD3-216ENST00000489927 SNTNA6NMZ2 147 aa12.42□□□□□ -0.42
PLOD3-216ENST00000489927 SEC14L6B5MCN3 397 aa12.42□□□□□ -0.42
PLOD3-216ENST00000489927 C15orf65H3BRN8 121 aa12.42□□□□□ -0.42
PLOD3-216ENST00000489927 SDCBPO00560 298 aaPredicted RBP12.42□□□□□ -0.42
PLOD3-216ENST00000489927 MAGEB3O15480 346 aa12.42□□□□□ -0.42
PLOD3-216ENST00000489927 CDRT1O95170 752 aa12.42□□□□□ -0.42
PLOD3-216ENST00000489927 ELANEP08246 267 aa12.42□□□□□ -0.42
PLOD3-216ENST00000489927 RPSAP08865 295 aaKnown RBP12.42□□□□□ -0.42
PLOD3-216ENST00000489927 GZMHP20718 246 aa12.42□□□□□ -0.42
PLOD3-216ENST00000489927 CFHR3Q02985 330 aa12.42□□□□□ -0.42
PLOD3-216ENST00000489927 ZIK1Q3SY52 487 aaPredicted RBP12.42□□□□□ -0.42
PLOD3-216ENST00000489927 ASCL4Q6XD76 172 aa12.42□□□□□ -0.42
PLOD3-216ENST00000489927 RTN4IP1Q8WWV3 396 aaPredicted RBP12.42□□□□□ -0.42
PLOD3-216ENST00000489927 ARL11Q969Q4 196 aa12.42□□□□□ -0.42
PLOD3-216ENST00000489927 ST6GALNAC6Q969X2 333 aa12.42□□□□□ -0.42
PLOD3-216ENST00000489927 S1PR3Q99500 378 aa12.42□□□□□ -0.42
PLOD3-216ENST00000489927 HSPB9Q9BQS6 159 aa12.42□□□□□ -0.42
PLOD3-216ENST00000489927 IFT22Q9H7X7 185 aa12.42□□□□□ -0.42
PLOD3-216ENST00000489927 TAS2R4Q9NYW5 299 aa12.42□□□□□ -0.42
PLOD3-216ENST00000489927 ST3GAL6Q9Y274 331 aa12.42□□□□□ -0.42
PLOD3-216ENST00000489927 ORC6Q9Y5N6 252 aa12.42□□□□□ -0.42
PLOD3-216ENST00000489927 STAB2Q8WWQ8 2551 aa12.41□□□□□ -0.42
PLOD3-216ENST00000489927 TMEM30CPA0ZSE6 113 aa12.41□□□□□ -0.42
PLOD3-216ENST00000489927 ZNF736B4DX44 427 aaPredicted RBP12.41□□□□□ -0.42
PLOD3-216ENST00000489927 RRP9O43818 475 aaKnown RBP12.41□□□□□ -0.42
PLOD3-216ENST00000489927 OR7C1O76099 320 aaPredicted RBP12.41□□□□□ -0.42
PLOD3-216ENST00000489927 SOX2P48431 317 aa12.41□□□□□ -0.42
PLOD3-216ENST00000489927 LINC00311Q8N616 119 aa12.41□□□□□ -0.42
PLOD3-216ENST00000489927 C8orf31Q8N9H6 132 aa12.41□□□□□ -0.42
PLOD3-216ENST00000489927 OR52M1Q8NGK5 317 aa12.41□□□□□ -0.42
PLOD3-216ENST00000489927 RGP1Q92546 391 aaPredicted RBP12.41□□□□□ -0.42
PLOD3-216ENST00000489927 MYCBPQ99417 103 aaPredicted RBP12.41□□□□□ -0.42
PLOD3-216ENST00000489927 RASL11BQ9BPW5 248 aa12.41□□□□□ -0.42
PLOD3-216ENST00000489927 JAM3Q9BX67 310 aa12.41□□□□□ -0.42
PLOD3-216ENST00000489927 ERVK13-1Q9NX77 482 aa12.41□□□□□ -0.42
PLOD3-216ENST00000489927 IGHV3-43A0A0B4J1X8 118 aa12.4□□□□□ -0.42
PLOD3-216ENST00000489927 EI24O14681 340 aa12.4□□□□□ -0.42
PLOD3-216ENST00000489927 GEMIN2O14893 280 aaKnown RBP12.4□□□□□ -0.42
PLOD3-216ENST00000489927 MOSP00540 346 aa12.4□□□□□ -0.42
PLOD3-216ENST00000489927 IGHG4P01861 327 aa12.4□□□□□ -0.42
PLOD3-216ENST00000489927 IGHV3-43DP0DP04 118 aa12.4□□□□□ -0.42
PLOD3-216ENST00000489927 GABRB1P18505 474 aa12.4□□□□□ -0.42
PLOD3-216ENST00000489927 CD1BP29016 333 aa12.4□□□□□ -0.42
PLOD3-216ENST00000489927 RBM11P57052 281 aaKnown RBP12.4□□□□□ -0.42
PLOD3-216ENST00000489927 MRPL28Q13084 256 aaKnown RBP12.4□□□□□ -0.42
PLOD3-216ENST00000489927 FHL3Q13643 280 aa12.4□□□□□ -0.42
PLOD3-216ENST00000489927 NHLRC3Q5JS37 347 aa12.4□□□□□ -0.42
PLOD3-216ENST00000489927 FAM71E2Q8N5Q1 922 aa12.4□□□□□ -0.42
PLOD3-216ENST00000489927 OR52N1Q8NH53 320 aa12.4□□□□□ -0.42
PLOD3-216ENST00000489927 CCDC107Q8WV48 283 aa12.4□□□□□ -0.42
PLOD3-216ENST00000489927 C4orf3Q8WVX3 66 aa12.4□□□□□ -0.42
PLOD3-216ENST00000489927 AMBNQ9NP70 447 aa12.4□□□□□ -0.42
PLOD3-216ENST00000489927 GFOD1Q9NXC2 390 aa12.4□□□□□ -0.42
PLOD3-216ENST00000489927 DYNC2H1Q8NCM8 4307 aaKnown RBP12.4□□□□□ -0.43
PLOD3-216ENST00000489927 DNAH7Q8WXX0 4024 aa12.4□□□□□ -0.43
PLOD3-216ENST00000489927 C3orf84H3BNL1 204 aa12.39□□□□□ -0.43
PLOD3-216ENST00000489927 SLC31A2O15432 143 aa12.39□□□□□ -0.43
PLOD3-216ENST00000489927 FADS2O95864 444 aaKnown RBP12.39□□□□□ -0.43
PLOD3-216ENST00000489927 VDAC1P21796 283 aa12.39□□□□□ -0.43
PLOD3-216ENST00000489927 IL3RAP26951 378 aa12.39□□□□□ -0.43
PLOD3-216ENST00000489927 PSMB8P28062 276 aa12.39□□□□□ -0.43
PLOD3-216ENST00000489927 SOX6P35712 828 aa12.39□□□□□ -0.43
PLOD3-216ENST00000489927 GTF2A1P52655 376 aaPredicted RBP12.39□□□□□ -0.43
PLOD3-216ENST00000489927 GBX2P52951 348 aaPredicted RBP12.39□□□□□ -0.43
PLOD3-216ENST00000489927 F2RL1P55085 397 aa12.39□□□□□ -0.43
PLOD3-216ENST00000489927 ZNF260Q3ZCT1 412 aa12.39□□□□□ -0.43
PLOD3-216ENST00000489927 OR11H1Q8NG94 326 aa12.39□□□□□ -0.43
PLOD3-216ENST00000489927 OR8H1Q8NGG4 311 aa12.39□□□□□ -0.43
PLOD3-216ENST00000489927 PYDC1Q8WXC3 89 aa12.39□□□□□ -0.43
PLOD3-216ENST00000489927 METTL9Q9H1A3 318 aa12.39□□□□□ -0.43
PLOD3-216ENST00000489927 IL36GQ9NZH8 169 aa12.39□□□□□ -0.43
PLOD3-216ENST00000489927 ING4Q9UNL4 249 aa12.39□□□□□ -0.43
PLOD3-216ENST00000489927 ZNF256Q9Y2P7 627 aaPredicted RBP12.39□□□□□ -0.43
PLOD3-216ENST00000489927 SIRT4Q9Y6E7 314 aaPredicted RBP12.39□□□□□ -0.43
PLOD3-216ENST00000489927 ORC5O43913 435 aa12.38□□□□□ -0.43
PLOD3-216ENST00000489927 CSTBP04080 98 aaKnown RBP12.38□□□□□ -0.43
PLOD3-216ENST00000489927 SERPINA2P20848 420 aa12.38□□□□□ -0.43
PLOD3-216ENST00000489927 RASSF2P50749 326 aa12.38□□□□□ -0.43
PLOD3-216ENST00000489927 ALDH3A2P51648 485 aa12.38□□□□□ -0.43
PLOD3-216ENST00000489927 ATAD3CQ5T2N8 411 aa12.38□□□□□ -0.43
PLOD3-216ENST00000489927 NEK7Q8TDX7 302 aa12.38□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms