RNA–Protein interactions for RNA: ENST00000489861.2

COL9A1-209, Transcript of collagen type IX alpha 1 chain, humanhuman

TSL 3

Gene COL9A1, Length 243 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A1-209ENST00000489861 IGHA1P01876 353 aa5.65□□□□□ -1.5
COL9A1-209ENST00000489861 TMEM225BP0DP42 221 aa5.65□□□□□ -1.5
COL9A1-209ENST00000489861 RAB3AP20336 220 aa5.65□□□□□ -1.5
COL9A1-209ENST00000489861 CDK2P24941 298 aa5.65□□□□□ -1.5
COL9A1-209ENST00000489861 DCKP27707 260 aa5.65□□□□□ -1.5
COL9A1-209ENST00000489861 RANBP1P43487 201 aa5.65□□□□□ -1.5
COL9A1-209ENST00000489861 KIR3DL2P43630 455 aa5.65□□□□□ -1.5
COL9A1-209ENST00000489861 INSL3P51460 131 aa5.65□□□□□ -1.5
COL9A1-209ENST00000489861 PPP3R1P63098 170 aa5.65□□□□□ -1.5
COL9A1-209ENST00000489861 TAGLNQ01995 201 aaKnown RBP5.65□□□□□ -1.5
COL9A1-209ENST00000489861 FHL3Q13643 280 aa5.65□□□□□ -1.5
COL9A1-209ENST00000489861 GPR176Q14439 515 aa5.65□□□□□ -1.5
COL9A1-209ENST00000489861 KIR2DS1Q14954 304 aa5.65□□□□□ -1.5
COL9A1-209ENST00000489861 HLA-DRB5Q30154 266 aa5.65□□□□□ -1.5
COL9A1-209ENST00000489861 TMEM30BQ3MIR4 351 aa5.65□□□□□ -1.5
COL9A1-209ENST00000489861 ZIK1Q3SY52 487 aaPredicted RBP5.65□□□□□ -1.5
COL9A1-209ENST00000489861 C9orf152Q5JTZ5 239 aa5.65□□□□□ -1.5
COL9A1-209ENST00000489861 RNLSQ5VYX0 342 aa5.65□□□□□ -1.5
COL9A1-209ENST00000489861 TTC23Q5W5X9 447 aa5.65□□□□□ -1.5
COL9A1-209ENST00000489861 RPL22L1Q6P5R6 122 aaKnown RBP5.65□□□□□ -1.5
COL9A1-209ENST00000489861 LINC00596Q86U02 117 aa5.65□□□□□ -1.5
COL9A1-209ENST00000489861 PQLC1Q8N2U9 271 aa5.65□□□□□ -1.5
COL9A1-209ENST00000489861 PARP16Q8N5Y8 322 aa5.65□□□□□ -1.5
COL9A1-209ENST00000489861 PACRGLQ8N7B6 248 aa5.65□□□□□ -1.5
COL9A1-209ENST00000489861 OR8U1Q8NH10 309 aa5.65□□□□□ -1.5
COL9A1-209ENST00000489861 GPR148Q8TDV2 347 aa5.65□□□□□ -1.5
COL9A1-209ENST00000489861 LGALS12Q96DT0 336 aa5.65□□□□□ -1.5
COL9A1-209ENST00000489861 PELI1Q96FA3 418 aa5.65□□□□□ -1.5
COL9A1-209ENST00000489861 GPER1Q99527 375 aa5.65□□□□□ -1.5
COL9A1-209ENST00000489861 MRPS18AQ9NVS2 196 aaKnown RBP5.65□□□□□ -1.5
COL9A1-209ENST00000489861 FAM118AQ9NWS6 357 aa5.65□□□□□ -1.5
COL9A1-209ENST00000489861 SMPD3Q9NY59 655 aaPredicted RBP5.65□□□□□ -1.5
COL9A1-209ENST00000489861 CKLFQ9UBR5 152 aa5.65□□□□□ -1.5
COL9A1-209ENST00000489861 LINC00527Q9UJ94 153 aa5.65□□□□□ -1.5
COL9A1-209ENST00000489861 GSTK1Q9Y2Q3 226 aa5.65□□□□□ -1.5
COL9A1-209ENST00000489861 EXOSC1Q9Y3B2 195 aaKnown RBP5.65□□□□□ -1.5
COL9A1-209ENST00000489861 ODAMA1E959 279 aa5.64□□□□□ -1.51
COL9A1-209ENST00000489861 ERICH4A6NGS2 130 aa5.64□□□□□ -1.51
COL9A1-209ENST00000489861 OR4C45A6NMZ5 311 aa5.64□□□□□ -1.51
COL9A1-209ENST00000489861 BUB1B-PAK6H3BSN5 160 aa5.64□□□□□ -1.51
COL9A1-209ENST00000489861 SIRPB1O00241 398 aa5.64□□□□□ -1.51
COL9A1-209ENST00000489861 DEGS1O15121 323 aa5.64□□□□□ -1.51
COL9A1-209ENST00000489861 BRI3O95415 125 aa5.64□□□□□ -1.51
COL9A1-209ENST00000489861 BAG2O95816 211 aa5.64□□□□□ -1.51
COL9A1-209ENST00000489861 OR2H2O95918 312 aa5.64□□□□□ -1.51
COL9A1-209ENST00000489861 CSTBP04080 98 aaKnown RBP5.64□□□□□ -1.51
COL9A1-209ENST00000489861 RPLP1P05386 114 aaKnown RBP5.64□□□□□ -1.51
COL9A1-209ENST00000489861 OR5H8P0DN80 308 aa5.64□□□□□ -1.51
COL9A1-209ENST00000489861 BCL3P20749 454 aa5.64□□□□□ -1.51
COL9A1-209ENST00000489861 TAS2R43P59537 309 aa5.64□□□□□ -1.51
COL9A1-209ENST00000489861 MADCAM1Q13477 382 aa5.64□□□□□ -1.51
COL9A1-209ENST00000489861 HES1Q14469 280 aa5.64□□□□□ -1.51
COL9A1-209ENST00000489861 IL13RA2Q14627 380 aa5.64□□□□□ -1.51
COL9A1-209ENST00000489861 RSU1Q15404 277 aa5.64□□□□□ -1.51
COL9A1-209ENST00000489861 KISS1Q15726 138 aa5.64□□□□□ -1.51
COL9A1-209ENST00000489861 Q3ZCU0 254 aa5.64□□□□□ -1.51
COL9A1-209ENST00000489861 TPTE2P1Q5T6R2 138 aa5.64□□□□□ -1.51
COL9A1-209ENST00000489861 ZNF691Q5VV52 312 aa5.64□□□□□ -1.51
COL9A1-209ENST00000489861 LHFPL3Q86UP9 236 aa5.64□□□□□ -1.51
COL9A1-209ENST00000489861 STX19Q8N4C7 294 aa5.64□□□□□ -1.51
COL9A1-209ENST00000489861 PXT1Q8NFP0 134 aa5.64□□□□□ -1.51
COL9A1-209ENST00000489861 OR4P4Q8NGL7 312 aa5.64□□□□□ -1.51
COL9A1-209ENST00000489861 OR13C9Q8NGT0 318 aa5.64□□□□□ -1.51
COL9A1-209ENST00000489861 RHOXF1Q8NHV9 184 aa5.64□□□□□ -1.51
COL9A1-209ENST00000489861 ST6GALNAC6Q969X2 333 aa5.64□□□□□ -1.51
COL9A1-209ENST00000489861 ADAT3Q96EY9 351 aaPredicted RBP5.64□□□□□ -1.51
COL9A1-209ENST00000489861 CHST6Q9GZX3 395 aa5.64□□□□□ -1.51
COL9A1-209ENST00000489861 ISYNA1Q9NPH2 558 aa5.64□□□□□ -1.51
COL9A1-209ENST00000489861 RBFOX1Q9NWB1 397 aaKnown RBP5.64□□□□□ -1.51
COL9A1-209ENST00000489861 ERVK13-1Q9NX77 482 aa5.64□□□□□ -1.51
COL9A1-209ENST00000489861 IGKV1-27A0A075B6S5 117 aa5.63□□□□□ -1.51
COL9A1-209ENST00000489861 KBTBD11-OT1A0A1B0GTJ5 212 aa5.63□□□□□ -1.51
COL9A1-209ENST00000489861 TMEM82A0PJX8 343 aa5.63□□□□□ -1.51
COL9A1-209ENST00000489861 H3BNX3 289 aa5.63□□□□□ -1.51
COL9A1-209ENST00000489861 H3BSH0 61 aa5.63□□□□□ -1.51
COL9A1-209ENST00000489861 PSPNO60542 156 aa5.63□□□□□ -1.51
COL9A1-209ENST00000489861 IGLV1-47P01700 117 aa5.63□□□□□ -1.51
COL9A1-209ENST00000489861 TMEM11P17152 192 aa5.63□□□□□ -1.51
COL9A1-209ENST00000489861 GABRB1P18505 474 aa5.63□□□□□ -1.51
COL9A1-209ENST00000489861 GZMHP20718 246 aa5.63□□□□□ -1.51
COL9A1-209ENST00000489861 LORP23490 312 aaPredicted RBP5.63□□□□□ -1.51
COL9A1-209ENST00000489861 NFYBP25208 207 aa5.63□□□□□ -1.51
COL9A1-209ENST00000489861 GLP1RP43220 463 aa5.63□□□□□ -1.51
COL9A1-209ENST00000489861 OR3A1P47881 315 aa5.63□□□□□ -1.51
COL9A1-209ENST00000489861 SNU13P55769 128 aaKnown RBP5.63□□□□□ -1.51
COL9A1-209ENST00000489861 PAX5Q02548 391 aa5.63□□□□□ -1.51
COL9A1-209ENST00000489861 SCN1BQ07699 218 aa5.63□□□□□ -1.51
COL9A1-209ENST00000489861 PMS2P11Q13670 270 aa5.63□□□□□ -1.51
COL9A1-209ENST00000489861 RBM39Q14498 530 aaKnown RBP5.63□□□□□ -1.51
COL9A1-209ENST00000489861 PAN3Q58A45 887 aaKnown RBP5.63□□□□□ -1.51
COL9A1-209ENST00000489861 ASPHD1Q5U4P2 390 aa5.63□□□□□ -1.51
COL9A1-209ENST00000489861 ELP2Q6IA86 826 aa5.63□□□□□ -1.51
COL9A1-209ENST00000489861 TRAT1Q6PIZ9 186 aa5.63□□□□□ -1.51
COL9A1-209ENST00000489861 ZNF429Q86V71 674 aa5.63□□□□□ -1.51
COL9A1-209ENST00000489861 RDH10Q8IZV5 341 aa5.63□□□□□ -1.51
COL9A1-209ENST00000489861 BATF2Q8N1L9 274 aa5.63□□□□□ -1.51
COL9A1-209ENST00000489861 FAM71E2Q8N5Q1 922 aa5.63□□□□□ -1.51
COL9A1-209ENST00000489861 OR8H1Q8NGG4 311 aa5.63□□□□□ -1.51
COL9A1-209ENST00000489861 OR51A2Q8NGJ7 313 aa5.63□□□□□ -1.51
COL9A1-209ENST00000489861 OR52I1Q8NGK6 324 aa5.63□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 87.5 ms