RNA–Protein interactions for RNA: ENST00000489853.1

SNRNP40-206, Transcript of small nuclear ribonucleoprotein U5 subunit 40, humanhuman

TSL 2

Gene SNRNP40, Length 1,928 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40-206ENST00000489853 TMEM217Q8N7C4 229 aa4.12□□□□□ -1.75
SNRNP40-206ENST00000489853 SIGLECL1Q8N7X8 197 aa4.12□□□□□ -1.75
SNRNP40-206ENST00000489853 Q8N976 141 aa4.12□□□□□ -1.75
SNRNP40-206ENST00000489853 OR52L2PQ8NGH6 319 aa4.12□□□□□ -1.75
SNRNP40-206ENST00000489853 OR52M1Q8NGK5 317 aa4.12□□□□□ -1.75
SNRNP40-206ENST00000489853 OR5D14Q8NGL3 314 aa4.12□□□□□ -1.75
SNRNP40-206ENST00000489853 OR5AR1Q8NGP9 310 aa4.12□□□□□ -1.75
SNRNP40-206ENST00000489853 ZNF596Q8TC21 504 aa4.12□□□□□ -1.75
SNRNP40-206ENST00000489853 C11orf40Q8WZ69 217 aa4.12□□□□□ -1.75
SNRNP40-206ENST00000489853 TMEM186Q96B77 213 aa4.12□□□□□ -1.75
SNRNP40-206ENST00000489853 C8orf44Q96CB5 159 aa4.12□□□□□ -1.75
SNRNP40-206ENST00000489853 NICN1Q9BSH3 213 aa4.12□□□□□ -1.75
SNRNP40-206ENST00000489853 KRTAP4-9Q9BYQ8 210 aa4.12□□□□□ -1.75
SNRNP40-206ENST00000489853 NAA60Q9H7X0 242 aa4.12□□□□□ -1.75
SNRNP40-206ENST00000489853 ZNF586Q9NXT0 402 aa4.12□□□□□ -1.75
SNRNP40-206ENST00000489853 LRIT1Q9P2V4 623 aa4.12□□□□□ -1.75
SNRNP40-206ENST00000489853 GPR34Q9UPC5 381 aa4.12□□□□□ -1.75
SNRNP40-206ENST00000489853 KIF26BQ2KJY2 2108 aa4.12□□□□□ -1.75
SNRNP40-206ENST00000489853 SCN2AQ99250 2005 aa4.12□□□□□ -1.75
SNRNP40-206ENST00000489853 PAPPA2Q9BXP8 1791 aa4.12□□□□□ -1.75
SNRNP40-206ENST00000489853 DOCK8Q8NF50 2099 aa4.11□□□□□ -1.75
SNRNP40-206ENST00000489853 CACNA1CQ13936 2221 aa4.11□□□□□ -1.75
SNRNP40-206ENST00000489853 A0A0A6YYD4 124 aa4.11□□□□□ -1.75
SNRNP40-206ENST00000489853 A0A0G2JLL6 359 aaPredicted RBP4.11□□□□□ -1.75
SNRNP40-206ENST00000489853 A0A1B0GV72 72 aa4.11□□□□□ -1.75
SNRNP40-206ENST00000489853 LOC107986453A0A1B0GWG9 222 aa4.11□□□□□ -1.75
SNRNP40-206ENST00000489853 A0A1W2PPV9 198 aa4.11□□□□□ -1.75
SNRNP40-206ENST00000489853 LRRC3CA6NJW4 275 aa4.11□□□□□ -1.75
SNRNP40-206ENST00000489853 SERPINE3A8MV23 424 aa4.11□□□□□ -1.75
SNRNP40-206ENST00000489853 H3BML4 177 aa4.11□□□□□ -1.75
SNRNP40-206ENST00000489853 CXCL11O14625 94 aa4.11□□□□□ -1.75
SNRNP40-206ENST00000489853 TRAF3IP2O43734 574 aaPredicted RBP4.11□□□□□ -1.75
SNRNP40-206ENST00000489853 OR7C2O60412 319 aa4.11□□□□□ -1.75
SNRNP40-206ENST00000489853 ZNF737O75373 536 aa4.11□□□□□ -1.75
SNRNP40-206ENST00000489853 GPX1P07203 203 aa4.11□□□□□ -1.75
SNRNP40-206ENST00000489853 SPTBP11277 2137 aa4.11□□□□□ -1.75
SNRNP40-206ENST00000489853 CRISP2P16562 243 aa4.11□□□□□ -1.75
SNRNP40-206ENST00000489853 IL3RAP26951 378 aa4.11□□□□□ -1.75
SNRNP40-206ENST00000489853 CST5P28325 142 aaPredicted RBP4.11□□□□□ -1.75
SNRNP40-206ENST00000489853 RPS27P42677 84 aaKnown RBP4.11□□□□□ -1.75
SNRNP40-206ENST00000489853 WASP42768 502 aa4.11□□□□□ -1.75
SNRNP40-206ENST00000489853 EMDP50402 254 aa4.11□□□□□ -1.75
SNRNP40-206ENST00000489853 CLDN15P56746 228 aa4.11□□□□□ -1.75
SNRNP40-206ENST00000489853 RIPPLY3P57055 190 aa4.11□□□□□ -1.75
SNRNP40-206ENST00000489853 SRPXP78539 464 aa4.11□□□□□ -1.75
SNRNP40-206ENST00000489853 ARG2P78540 354 aa4.11□□□□□ -1.75
SNRNP40-206ENST00000489853 PRDX1Q06830 199 aaKnown RBP4.11□□□□□ -1.75
SNRNP40-206ENST00000489853 EXT1Q16394 746 aa4.11□□□□□ -1.75
SNRNP40-206ENST00000489853 CLEC12BQ2HXU8 276 aa4.11□□□□□ -1.75
SNRNP40-206ENST00000489853 KRTCAP3Q53RY4 240 aa4.11□□□□□ -1.75
SNRNP40-206ENST00000489853 Q5PR19 223 aa4.11□□□□□ -1.75
SNRNP40-206ENST00000489853 FHL5Q5TD97 284 aa4.11□□□□□ -1.75
SNRNP40-206ENST00000489853 SAMD13Q5VXD3 122 aa4.11□□□□□ -1.75
SNRNP40-206ENST00000489853 OR4A47Q6IF82 309 aa4.11□□□□□ -1.75
SNRNP40-206ENST00000489853 C22orf39Q6P5X5 142 aa4.11□□□□□ -1.75
SNRNP40-206ENST00000489853 KLHL24Q6TFL4 600 aa4.11□□□□□ -1.75
SNRNP40-206ENST00000489853 TMEM144Q7Z5S9 345 aa4.11□□□□□ -1.75
SNRNP40-206ENST00000489853 PRRT2Q7Z6L0 340 aaPredicted RBP4.11□□□□□ -1.75
SNRNP40-206ENST00000489853 BATF2Q8N1L9 274 aa4.11□□□□□ -1.75
SNRNP40-206ENST00000489853 MUC15Q8N387 334 aa4.11□□□□□ -1.75
SNRNP40-206ENST00000489853 ZIC4Q8N9L1 334 aa4.11□□□□□ -1.75
SNRNP40-206ENST00000489853 OR5C1Q8NGR4 320 aa4.11□□□□□ -1.75
SNRNP40-206ENST00000489853 TMEM171Q8WVE6 324 aa4.11□□□□□ -1.75
SNRNP40-206ENST00000489853 PSMF1Q92530 271 aa4.11□□□□□ -1.75
SNRNP40-206ENST00000489853 ARRDC3Q96B67 414 aa4.11□□□□□ -1.75
SNRNP40-206ENST00000489853 ARHGAP5-AS1Q96IT6 56 aa4.11□□□□□ -1.75
SNRNP40-206ENST00000489853 LMLNQ96KR4 655 aa4.11□□□□□ -1.75
SNRNP40-206ENST00000489853 ATP5SQ99766 215 aa4.11□□□□□ -1.75
SNRNP40-206ENST00000489853 ZNF665Q9H7R5 613 aa4.11□□□□□ -1.75
SNRNP40-206ENST00000489853 PATZ1Q9HBE1 687 aaKnown RBP4.11□□□□□ -1.75
SNRNP40-206ENST00000489853 G6PC2Q9NQR9 355 aa4.11□□□□□ -1.75
SNRNP40-206ENST00000489853 CLEC4EQ9ULY5 219 aa4.11□□□□□ -1.75
SNRNP40-206ENST00000489853 PSG11Q9UQ72 335 aa4.11□□□□□ -1.75
SNRNP40-206ENST00000489853 HS3ST2Q9Y278 367 aa4.11□□□□□ -1.75
SNRNP40-206ENST00000489853 X6R8D5 127 aa4.11□□□□□ -1.75
SNRNP40-206ENST00000489853 PLXNA2O75051 1894 aa4.11□□□□□ -1.75
SNRNP40-206ENST00000489853 LAMA2P24043 3122 aaKnown RBP4.11□□□□□ -1.75
SNRNP40-206ENST00000489853 A0A1B0GUS0 222 aa4.11□□□□□ -1.75
SNRNP40-206ENST00000489853 LOC105378220A0A1B0GUY1 285 aaPredicted RBP4.11□□□□□ -1.75
SNRNP40-206ENST00000489853 SCO2A0A1W2PP80 73 aa4.11□□□□□ -1.75
SNRNP40-206ENST00000489853 C4orf51C9J302 202 aa4.11□□□□□ -1.75
SNRNP40-206ENST00000489853 K7EQS6 105 aa4.11□□□□□ -1.75
SNRNP40-206ENST00000489853 P2RY10O00398 339 aa4.11□□□□□ -1.75
SNRNP40-206ENST00000489853 HS3ST1O14792 307 aa4.11□□□□□ -1.75
SNRNP40-206ENST00000489853 LATO43561 262 aa4.11□□□□□ -1.75
SNRNP40-206ENST00000489853 ZNF253O75346 499 aa4.11□□□□□ -1.75
SNRNP40-206ENST00000489853 SERF1AO75920 110 aa4.11□□□□□ -1.75
SNRNP40-206ENST00000489853 MPIG6BO95866 241 aa4.11□□□□□ -1.75
SNRNP40-206ENST00000489853 EFEMP2O95967 443 aa4.11□□□□□ -1.75
SNRNP40-206ENST00000489853 NRASP01111 189 aa4.11□□□□□ -1.75
SNRNP40-206ENST00000489853 KRASP01116 189 aa4.11□□□□□ -1.75
SNRNP40-206ENST00000489853 IFNA5P01569 189 aa4.11□□□□□ -1.75
SNRNP40-206ENST00000489853 HLA-DQA2P01906 255 aa4.11□□□□□ -1.75
SNRNP40-206ENST00000489853 GYPAP02724 150 aa4.11□□□□□ -1.75
SNRNP40-206ENST00000489853 BGLAPP02818 100 aa4.11□□□□□ -1.75
SNRNP40-206ENST00000489853 IFI6P09912 130 aa4.11□□□□□ -1.75
SNRNP40-206ENST00000489853 ZNF728P0DKX0 622 aa4.11□□□□□ -1.75
SNRNP40-206ENST00000489853 PNMTP11086 282 aa4.11□□□□□ -1.75
SNRNP40-206ENST00000489853 CPMP14384 443 aa4.11□□□□□ -1.75
SNRNP40-206ENST00000489853 ANOS1P23352 680 aa4.11□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms