RNA–Protein interactions for RNA: ENST00000489719.1

ABCF3-217, Transcript of ATP binding cassette subfamily F member 3, humanhuman

TSL 4

Gene ABCF3, Length 569 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF3-217ENST00000489719 CCDC90BQ9GZT6 254 aa14.31□□□□□ -0.12
ABCF3-217ENST00000489719 DUSP21Q9H596 190 aa14.31□□□□□ -0.12
ABCF3-217ENST00000489719 TRAPPC2LQ9UL33 140 aa14.31□□□□□ -0.12
ABCF3-217ENST00000489719 PKD1L1Q8TDX9 2849 aa14.31□□□□□ -0.12
ABCF3-217ENST00000489719 RGS10O43665 173 aa14.3□□□□□ -0.12
ABCF3-217ENST00000489719 FAM106CPP0CH98 169 aa14.3□□□□□ -0.12
ABCF3-217ENST00000489719 HSMCR30P0CW71 290 aa14.3□□□□□ -0.12
ABCF3-217ENST00000489719 MGMTP16455 207 aa14.3□□□□□ -0.12
ABCF3-217ENST00000489719 FUT3P21217 361 aa14.3□□□□□ -0.12
ABCF3-217ENST00000489719 SSTR5P35346 364 aa14.3□□□□□ -0.12
ABCF3-217ENST00000489719 HSPA13P48723 471 aa14.3□□□□□ -0.12
ABCF3-217ENST00000489719 GNG10P50151 68 aa14.3□□□□□ -0.12
ABCF3-217ENST00000489719 MADCAM1Q13477 382 aa14.3□□□□□ -0.12
ABCF3-217ENST00000489719 INSL4Q14641 139 aa14.3□□□□□ -0.12
ABCF3-217ENST00000489719 UTF1Q5T230 341 aa14.3□□□□□ -0.12
ABCF3-217ENST00000489719 RAB12Q6IQ22 244 aa14.3□□□□□ -0.12
ABCF3-217ENST00000489719 OR10X1Q8NGY0 326 aa14.3□□□□□ -0.12
ABCF3-217ENST00000489719 TOMM40LQ969M1 308 aa14.3□□□□□ -0.12
ABCF3-217ENST00000489719 ANKRD60Q9BZ19 345 aa14.3□□□□□ -0.12
ABCF3-217ENST00000489719 LIN7BQ9HAP6 207 aa14.3□□□□□ -0.12
ABCF3-217ENST00000489719 RAB9BQ9NP90 201 aa14.3□□□□□ -0.12
ABCF3-217ENST00000489719 SERTAD4Q9NUC0 356 aa14.3□□□□□ -0.12
ABCF3-217ENST00000489719 ETAA1Q9NY74 926 aa14.3□□□□□ -0.12
ABCF3-217ENST00000489719 LSM2Q9Y333 95 aaKnown RBP14.3□□□□□ -0.12
ABCF3-217ENST00000489719 FAM90A10PA6NDY2 464 aa14.29□□□□□ -0.12
ABCF3-217ENST00000489719 FAM90A18PA6NE21 464 aa14.29□□□□□ -0.12
ABCF3-217ENST00000489719 FAM90A16PA6NEW6 464 aa14.29□□□□□ -0.12
ABCF3-217ENST00000489719 FAM90A20PA6NIJ5 464 aa14.29□□□□□ -0.12
ABCF3-217ENST00000489719 FAM90A7PA6NKC0 464 aa14.29□□□□□ -0.12
ABCF3-217ENST00000489719 FAM90A12PA8MX19 464 aa14.29□□□□□ -0.12
ABCF3-217ENST00000489719 FAM90A5PA8MXJ8 464 aa14.29□□□□□ -0.12
ABCF3-217ENST00000489719 FAM90A23PA8MXZ1 464 aa14.29□□□□□ -0.12
ABCF3-217ENST00000489719 AIPO00170 330 aa14.29□□□□□ -0.12
ABCF3-217ENST00000489719 ORC5O43913 435 aa14.29□□□□□ -0.12
ABCF3-217ENST00000489719 GLAP06280 429 aa14.29□□□□□ -0.12
ABCF3-217ENST00000489719 FAM90A15PP0C7V4 464 aa14.29□□□□□ -0.12
ABCF3-217ENST00000489719 FAM90A13PP0C7W8 464 aa14.29□□□□□ -0.12
ABCF3-217ENST00000489719 FAM90A14PP0C7W9 464 aa14.29□□□□□ -0.12
ABCF3-217ENST00000489719 FAM90A24PP0C7X0 464 aa14.29□□□□□ -0.12
ABCF3-217ENST00000489719 UBBP0CG47 229 aa14.29□□□□□ -0.12
ABCF3-217ENST00000489719 SRMP19623 302 aa14.29□□□□□ -0.12
ABCF3-217ENST00000489719 VDAC2P45880 294 aaPredicted RBP14.29□□□□□ -0.12
ABCF3-217ENST00000489719 IRF3Q14653 427 aa14.29□□□□□ -0.12
ABCF3-217ENST00000489719 HSD17B12Q53GQ0 312 aa14.29□□□□□ -0.12
ABCF3-217ENST00000489719 RBM48Q5RL73 367 aaKnown RBP14.29□□□□□ -0.12
ABCF3-217ENST00000489719 LIPKQ5VXJ0 399 aa14.29□□□□□ -0.12
ABCF3-217ENST00000489719 ZNF497Q6ZNH5 498 aa14.29□□□□□ -0.12
ABCF3-217ENST00000489719 LYPD6Q86Y78 171 aa14.29□□□□□ -0.12
ABCF3-217ENST00000489719 TMEM104Q8NE00 496 aa14.29□□□□□ -0.12
ABCF3-217ENST00000489719 OR52M1Q8NGK5 317 aa14.29□□□□□ -0.12
ABCF3-217ENST00000489719 CFHR4Q92496 578 aa14.29□□□□□ -0.12
ABCF3-217ENST00000489719 PHYHIPQ92561 330 aa14.29□□□□□ -0.12
ABCF3-217ENST00000489719 RBM14Q96PK6 669 aaKnown RBP14.29□□□□□ -0.12
ABCF3-217ENST00000489719 SLC25A33Q9BSK2 321 aa14.29□□□□□ -0.12
ABCF3-217ENST00000489719 CST11Q9H112 138 aa14.29□□□□□ -0.12
ABCF3-217ENST00000489719 SDCBPO00560 298 aaPredicted RBP14.28□□□□□ -0.12
ABCF3-217ENST00000489719 SPINT2O43291 252 aa14.28□□□□□ -0.12
ABCF3-217ENST00000489719 OR2F2O95006 317 aa14.28□□□□□ -0.12
ABCF3-217ENST00000489719 RAB7AP51149 207 aa14.28□□□□□ -0.12
ABCF3-217ENST00000489719 FAM27D1Q5T7N8 215 aa14.28□□□□□ -0.12
ABCF3-217ENST00000489719 SYT6Q5T7P8 510 aaPredicted RBP14.28□□□□□ -0.12
ABCF3-217ENST00000489719 IZUMO2Q6UXV1 221 aa14.28□□□□□ -0.12
ABCF3-217ENST00000489719 Q6ZS46 218 aa14.28□□□□□ -0.12
ABCF3-217ENST00000489719 THNSL2Q86YJ6 484 aa14.28□□□□□ -0.12
ABCF3-217ENST00000489719 TMEM203Q969S6 136 aa14.28□□□□□ -0.12
ABCF3-217ENST00000489719 FAM46BQ96A09 425 aa14.28□□□□□ -0.12
ABCF3-217ENST00000489719 ISYNA1Q9NPH2 558 aa14.28□□□□□ -0.12
ABCF3-217ENST00000489719 RCC2Q9P258 522 aaKnown RBP14.28□□□□□ -0.12
ABCF3-217ENST00000489719 A0A1W2PPE3 182 aa14.27□□□□□ -0.13
ABCF3-217ENST00000489719 C15orf65H3BRN8 121 aa14.27□□□□□ -0.13
ABCF3-217ENST00000489719 FBXO24O75426 580 aa14.27□□□□□ -0.13
ABCF3-217ENST00000489719 CA11O75493 328 aa14.27□□□□□ -0.13
ABCF3-217ENST00000489719 TSPAN15O95858 294 aa14.27□□□□□ -0.13
ABCF3-217ENST00000489719 MPIG6BO95866 241 aa14.27□□□□□ -0.13
ABCF3-217ENST00000489719 CRHBPP24387 322 aa14.27□□□□□ -0.13
ABCF3-217ENST00000489719 VHLP40337 213 aa14.27□□□□□ -0.13
ABCF3-217ENST00000489719 GP2P55259 537 aaKnown RBP14.27□□□□□ -0.13
ABCF3-217ENST00000489719 EMX1Q04741 257 aaPredicted RBP14.27□□□□□ -0.13
ABCF3-217ENST00000489719 TPBGQ13641 420 aa14.27□□□□□ -0.13
ABCF3-217ENST00000489719 TRAM1Q15629 374 aa14.27□□□□□ -0.13
ABCF3-217ENST00000489719 C6orf183Q5T699 404 aa14.27□□□□□ -0.13
ABCF3-217ENST00000489719 PRSS48Q7RTY5 328 aa14.27□□□□□ -0.13
ABCF3-217ENST00000489719 LRRTM1Q86UE6 522 aa14.27□□□□□ -0.13
ABCF3-217ENST00000489719 OR4K15Q8NH41 348 aa14.27□□□□□ -0.13
ABCF3-217ENST00000489719 UBALD1Q8TB05 177 aa14.27□□□□□ -0.13
ABCF3-217ENST00000489719 Q96M66 194 aa14.27□□□□□ -0.13
ABCF3-217ENST00000489719 KIAA2026Q5HYC2 2103 aa14.27□□□□□ -0.13
ABCF3-217ENST00000489719 DSCAML1Q8TD84 2053 aa14.27□□□□□ -0.13
ABCF3-217ENST00000489719 UBE2QL1A1L167 161 aa14.26□□□□□ -0.13
ABCF3-217ENST00000489719 M0QZK8 103 aa14.26□□□□□ -0.13
ABCF3-217ENST00000489719 GAPDHP04406 335 aaKnown RBP14.26□□□□□ -0.13
ABCF3-217ENST00000489719 HES1Q14469 280 aa14.26□□□□□ -0.13
ABCF3-217ENST00000489719 ABCA11PQ4W5N1 156 aa14.26□□□□□ -0.13
ABCF3-217ENST00000489719 TRAT1Q6PIZ9 186 aa14.26□□□□□ -0.13
ABCF3-217ENST00000489719 CENPVQ7Z7K6 275 aaPredicted RBP14.26□□□□□ -0.13
ABCF3-217ENST00000489719 OR8H3Q8N146 312 aa14.26□□□□□ -0.13
ABCF3-217ENST00000489719 DRAM1Q8N682 238 aa14.26□□□□□ -0.13
ABCF3-217ENST00000489719 CNBD2Q96M20 576 aa14.26□□□□□ -0.13
ABCF3-217ENST00000489719 NEDD4LQ96PU5 975 aa14.26□□□□□ -0.13
ABCF3-217ENST00000489719 GFOD1Q9NXC2 390 aa14.26□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 51.6 ms