RNA–Protein interactions for RNA: ENST00000489656.5

VPS26A-205, Transcript of VPS26, retromer complex component A, humanhuman

TSL 5

Gene VPS26A, Length 817 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS26A-205ENST00000489656 CCDC107Q8WV48 283 aa11.77□□□□□ -0.53
VPS26A-205ENST00000489656 RAB1CQ92928 201 aa11.77□□□□□ -0.53
VPS26A-205ENST00000489656 TIMD4Q96H15 378 aa11.77□□□□□ -0.53
VPS26A-205ENST00000489656 PSMG3-AS1Q96PY0 264 aa11.77□□□□□ -0.53
VPS26A-205ENST00000489656 GINS4Q9BRT9 223 aa11.77□□□□□ -0.53
VPS26A-205ENST00000489656 C20orf85Q9H1P6 137 aa11.77□□□□□ -0.53
VPS26A-205ENST00000489656 NUDT15Q9NV35 164 aa11.77□□□□□ -0.53
VPS26A-205ENST00000489656 PCDHB10Q9UN67 800 aa11.77□□□□□ -0.53
VPS26A-205ENST00000489656 ARID1AO14497 2285 aa11.77□□□□□ -0.53
VPS26A-205ENST00000489656 MEIKINA0A087WXM9 373 aa11.76□□□□□ -0.53
VPS26A-205ENST00000489656 A0A1B0GW55 424 aa11.76□□□□□ -0.53
VPS26A-205ENST00000489656 INMT-MINDY4F8WBC2 141 aa11.76□□□□□ -0.53
VPS26A-205ENST00000489656 SDCBPO00560 298 aaPredicted RBP11.76□□□□□ -0.53
VPS26A-205ENST00000489656 ADAM20O43506 726 aa11.76□□□□□ -0.53
VPS26A-205ENST00000489656 LY6HO94772 140 aa11.76□□□□□ -0.53
VPS26A-205ENST00000489656 SCTP09683 121 aa11.76□□□□□ -0.53
VPS26A-205ENST00000489656 H2AFB2P0C5Z0 115 aa11.76□□□□□ -0.53
VPS26A-205ENST00000489656 DUX4L2P0CJ85 424 aa11.76□□□□□ -0.53
VPS26A-205ENST00000489656 DUX4L3P0CJ86 424 aa11.76□□□□□ -0.53
VPS26A-205ENST00000489656 DUX4L4P0CJ87 422 aa11.76□□□□□ -0.53
VPS26A-205ENST00000489656 DUX4L5P0CJ88 424 aa11.76□□□□□ -0.53
VPS26A-205ENST00000489656 DUX4L6P0CJ89 424 aa11.76□□□□□ -0.53
VPS26A-205ENST00000489656 DUX4L7P0CJ90 424 aa11.76□□□□□ -0.53
VPS26A-205ENST00000489656 SSTR2P30874 369 aa11.76□□□□□ -0.53
VPS26A-205ENST00000489656 ECI1P42126 302 aa11.76□□□□□ -0.53
VPS26A-205ENST00000489656 TSPAN5P62079 268 aa11.76□□□□□ -0.53
VPS26A-205ENST00000489656 HERPUD1Q15011 391 aa11.76□□□□□ -0.53
VPS26A-205ENST00000489656 DUX4L9Q6RFH8 374 aaPredicted RBP11.76□□□□□ -0.53
VPS26A-205ENST00000489656 ZDHHC22Q8N966 263 aa11.76□□□□□ -0.53
VPS26A-205ENST00000489656 OR6F1Q8NGZ6 308 aa11.76□□□□□ -0.53
VPS26A-205ENST00000489656 GIMAP1Q8WWP7 306 aa11.76□□□□□ -0.53
VPS26A-205ENST00000489656 MRGPRFQ96AM1 343 aa11.76□□□□□ -0.53
VPS26A-205ENST00000489656 TAF9BQ9HBM6 251 aa11.76□□□□□ -0.53
VPS26A-205ENST00000489656 KCNIP1Q9NZI2 227 aa11.76□□□□□ -0.53
VPS26A-205ENST00000489656 OR6C3Q9NZP0 311 aa11.76□□□□□ -0.53
VPS26A-205ENST00000489656 DUX4Q9UBX2 424 aa11.76□□□□□ -0.53
VPS26A-205ENST00000489656 SLC25A10Q9UBX3 287 aaPredicted RBP11.76□□□□□ -0.53
VPS26A-205ENST00000489656 TRAV6A0A075B6T7 132 aa11.75□□□□□ -0.53
VPS26A-205ENST00000489656 TRBV6-7A0A0A0MS04 114 aa11.75□□□□□ -0.53
VPS26A-205ENST00000489656 IGKV1-6A0A0C4DH72 117 aa11.75□□□□□ -0.53
VPS26A-205ENST00000489656 C12orf77C9JDV5 145 aa11.75□□□□□ -0.53
VPS26A-205ENST00000489656 NDUFB3O43676 98 aa11.75□□□□□ -0.53
VPS26A-205ENST00000489656 NDUFS7O75251 213 aa11.75□□□□□ -0.53
VPS26A-205ENST00000489656 PEX14O75381 377 aa11.75□□□□□ -0.53
VPS26A-205ENST00000489656 FCN3O75636 299 aa11.75□□□□□ -0.53
VPS26A-205ENST00000489656 TUSC2O75896 110 aa11.75□□□□□ -0.53
VPS26A-205ENST00000489656 DHFRP00374 187 aa11.75□□□□□ -0.53
VPS26A-205ENST00000489656 GLP1RP43220 463 aa11.75□□□□□ -0.53
VPS26A-205ENST00000489656 EDDM3AQ14507 147 aa11.75□□□□□ -0.53
VPS26A-205ENST00000489656 SURF2Q15527 256 aaPredicted RBP11.75□□□□□ -0.53
VPS26A-205ENST00000489656 SCGB2B2Q4G0G5 96 aa11.75□□□□□ -0.53
VPS26A-205ENST00000489656 LRRC10Q5BKY1 277 aa11.75□□□□□ -0.53
VPS26A-205ENST00000489656 IGSF11Q5DX21 431 aa11.75□□□□□ -0.53
VPS26A-205ENST00000489656 AADACL3Q5VUY0 350 aa11.75□□□□□ -0.53
VPS26A-205ENST00000489656 LYPD2Q6UXB3 125 aa11.75□□□□□ -0.53
VPS26A-205ENST00000489656 OR13A1Q8NGR1 328 aa11.75□□□□□ -0.53
VPS26A-205ENST00000489656 CORO2AQ92828 525 aa11.75□□□□□ -0.53
VPS26A-205ENST00000489656 TOLLIPQ9H0E2 274 aa11.75□□□□□ -0.53
VPS26A-205ENST00000489656 ING3Q9NXR8 418 aa11.75□□□□□ -0.53
VPS26A-205ENST00000489656 CTSZQ9UBR2 303 aa11.75□□□□□ -0.53
VPS26A-205ENST00000489656 LPAR3Q9UBY5 353 aa11.75□□□□□ -0.53
VPS26A-205ENST00000489656 MIOXQ9UGB7 285 aa11.75□□□□□ -0.53
VPS26A-205ENST00000489656 C15orf65H3BRN8 121 aa11.74□□□□□ -0.53
VPS26A-205ENST00000489656 PPIHO43447 177 aaKnown RBP11.74□□□□□ -0.53
VPS26A-205ENST00000489656 IGHV4-39P01824 125 aa11.74□□□□□ -0.53
VPS26A-205ENST00000489656 CGB3P0DN86 165 aa11.74□□□□□ -0.53
VPS26A-205ENST00000489656 CGB7P0DN87 165 aa11.74□□□□□ -0.53
VPS26A-205ENST00000489656 GZMHP20718 246 aa11.74□□□□□ -0.53
VPS26A-205ENST00000489656 FPR2P25090 351 aa11.74□□□□□ -0.53
VPS26A-205ENST00000489656 MEF2CQ06413 473 aaPredicted RBP11.74□□□□□ -0.53
VPS26A-205ENST00000489656 SPICQ8N5J4 248 aa11.74□□□□□ -0.53
VPS26A-205ENST00000489656 TPRX1Q8N7U7 411 aa11.74□□□□□ -0.53
VPS26A-205ENST00000489656 ZNF565Q8N9K5 539 aa11.74□□□□□ -0.53
VPS26A-205ENST00000489656 SCGB3A2Q96PL1 93 aa11.74□□□□□ -0.53
VPS26A-205ENST00000489656 ZNF2Q9BSG1 426 aaPredicted RBP11.74□□□□□ -0.53
VPS26A-205ENST00000489656 ALX4Q9H161 411 aaPredicted RBP11.74□□□□□ -0.53
VPS26A-205ENST00000489656 LIME1Q9H400 295 aa11.74□□□□□ -0.53
VPS26A-205ENST00000489656 BARX1Q9HBU1 254 aaPredicted RBP11.74□□□□□ -0.53
VPS26A-205ENST00000489656 RAB9BQ9NP90 201 aa11.74□□□□□ -0.53
VPS26A-205ENST00000489656 MALRD1Q5VYJ5 2156 aa11.74□□□□□ -0.53
VPS26A-205ENST00000489656 TRAV39A0A0B4J263 110 aa11.73□□□□□ -0.53
VPS26A-205ENST00000489656 A0A0B4J293 547 aa11.73□□□□□ -0.53
VPS26A-205ENST00000489656 OR5H14A6NHG9 310 aa11.73□□□□□ -0.53
VPS26A-205ENST00000489656 F5H0A9 414 aaPredicted RBP11.73□□□□□ -0.53
VPS26A-205ENST00000489656 DVL1O14640 695 aa11.73□□□□□ -0.53
VPS26A-205ENST00000489656 ARPC1BO15143 372 aaKnown RBP11.73□□□□□ -0.53
VPS26A-205ENST00000489656 PRAF2O60831 178 aa11.73□□□□□ -0.53
VPS26A-205ENST00000489656 ANKRD17O75179 2603 aaKnown RBP11.73□□□□□ -0.53
VPS26A-205ENST00000489656 IL5P05113 134 aa11.73□□□□□ -0.53
VPS26A-205ENST00000489656 COL8A1P27658 744 aa11.73□□□□□ -0.53
VPS26A-205ENST00000489656 FCGR2CP31995 323 aa11.73□□□□□ -0.53
VPS26A-205ENST00000489656 GPR6P46095 362 aaPredicted RBP11.73□□□□□ -0.53
VPS26A-205ENST00000489656 UCP3P55916 312 aa11.73□□□□□ -0.53
VPS26A-205ENST00000489656 EDDM3BP56851 147 aa11.73□□□□□ -0.53
VPS26A-205ENST00000489656 SEC61A1P61619 476 aaKnown RBP11.73□□□□□ -0.53
VPS26A-205ENST00000489656 HTD2P86397 168 aa11.73□□□□□ -0.53
VPS26A-205ENST00000489656 AVPI1Q5T686 147 aa11.73□□□□□ -0.53
VPS26A-205ENST00000489656 C5orf24Q7Z6I8 188 aa11.73□□□□□ -0.53
VPS26A-205ENST00000489656 H1FOOQ8IZA3 346 aaPredicted RBP11.73□□□□□ -0.53
VPS26A-205ENST00000489656 MRGPRDQ8TDS7 321 aa11.73□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms