RNA–Protein interactions for RNA: ENST00000489037.1

BRCA1-218, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 4

Gene BRCA1, Length 455 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-218ENST00000489037 CA11O75493 328 aa11.54□□□□□ -0.56
BRCA1-218ENST00000489037 TSPAN9O75954 239 aa11.54□□□□□ -0.56
BRCA1-218ENST00000489037 CGB3P0DN86 165 aa11.54□□□□□ -0.56
BRCA1-218ENST00000489037 CGB7P0DN87 165 aa11.54□□□□□ -0.56
BRCA1-218ENST00000489037 CALRP27797 417 aaKnown RBP11.54□□□□□ -0.56
BRCA1-218ENST00000489037 GDNFP39905 211 aa11.54□□□□□ -0.56
BRCA1-218ENST00000489037 DYNLT3P51808 116 aa11.54□□□□□ -0.56
BRCA1-218ENST00000489037 GP2P55259 537 aaKnown RBP11.54□□□□□ -0.56
BRCA1-218ENST00000489037 EMX1Q04741 257 aaPredicted RBP11.54□□□□□ -0.56
BRCA1-218ENST00000489037 HLA-DRB5Q30154 266 aa11.54□□□□□ -0.56
BRCA1-218ENST00000489037 CCDC144NLQ6NUI1 221 aa11.54□□□□□ -0.56
BRCA1-218ENST00000489037 BAIAP2L2Q6UXY1 529 aa11.54□□□□□ -0.56
BRCA1-218ENST00000489037 ZNF497Q6ZNH5 498 aa11.54□□□□□ -0.56
BRCA1-218ENST00000489037 TMEM91Q6ZNR0 172 aa11.54□□□□□ -0.56
BRCA1-218ENST00000489037 SLC16A12Q6ZSM3 486 aa11.54□□□□□ -0.56
BRCA1-218ENST00000489037 DYNAPQ8N1N2 210 aa11.54□□□□□ -0.56
BRCA1-218ENST00000489037 TMEM104Q8NE00 496 aa11.54□□□□□ -0.56
BRCA1-218ENST00000489037 OR4P4Q8NGL7 312 aa11.54□□□□□ -0.56
BRCA1-218ENST00000489037 OR6M1Q8NGM8 313 aa11.54□□□□□ -0.56
BRCA1-218ENST00000489037 LINC01006Q8NI28 216 aa11.54□□□□□ -0.56
BRCA1-218ENST00000489037 CCDC107Q8WV48 283 aa11.54□□□□□ -0.56
BRCA1-218ENST00000489037 CAPSLQ8WWF8 208 aa11.54□□□□□ -0.56
BRCA1-218ENST00000489037 ARL11Q969Q4 196 aa11.54□□□□□ -0.56
BRCA1-218ENST00000489037 Q96M66 194 aa11.54□□□□□ -0.56
BRCA1-218ENST00000489037 TMEM59Q9BXS4 323 aa11.54□□□□□ -0.56
BRCA1-218ENST00000489037 ZNF581Q9P0T4 197 aa11.54□□□□□ -0.56
BRCA1-218ENST00000489037 RCC2Q9P258 522 aaKnown RBP11.54□□□□□ -0.56
BRCA1-218ENST00000489037 TCF19Q9Y242 345 aa11.54□□□□□ -0.56
BRCA1-218ENST00000489037 LRRC42Q9Y546 428 aa11.54□□□□□ -0.56
BRCA1-218ENST00000489037 TRAV39A0A0B4J263 110 aa11.53□□□□□ -0.56
BRCA1-218ENST00000489037 NPIPB11E5RHQ5 1161 aa11.53□□□□□ -0.56
BRCA1-218ENST00000489037 BUB1B-PAK6H3BSN5 160 aa11.53□□□□□ -0.56
BRCA1-218ENST00000489037 PDCD5O14737 125 aa11.53□□□□□ -0.56
BRCA1-218ENST00000489037 ORC5O43913 435 aa11.53□□□□□ -0.56
BRCA1-218ENST00000489037 PDCD6O75340 191 aa11.53□□□□□ -0.56
BRCA1-218ENST00000489037 BPNT1O95861 308 aa11.53□□□□□ -0.56
BRCA1-218ENST00000489037 IGLV1-47P01700 117 aa11.53□□□□□ -0.56
BRCA1-218ENST00000489037 MT-ND4P03905 459 aa11.53□□□□□ -0.56
BRCA1-218ENST00000489037 MNDAP41218 407 aa11.53□□□□□ -0.56
BRCA1-218ENST00000489037 RAB13P51153 203 aa11.53□□□□□ -0.56
BRCA1-218ENST00000489037 FABP5Q01469 135 aa11.53□□□□□ -0.56
BRCA1-218ENST00000489037 C6orf183Q5T699 404 aa11.53□□□□□ -0.56
BRCA1-218ENST00000489037 TRAT1Q6PIZ9 186 aa11.53□□□□□ -0.56
BRCA1-218ENST00000489037 OR2T6Q8NHC8 308 aa11.53□□□□□ -0.56
BRCA1-218ENST00000489037 FCGR1BQ92637 280 aa11.53□□□□□ -0.56
BRCA1-218ENST00000489037 MMP28Q9H239 520 aa11.53□□□□□ -0.56
BRCA1-218ENST00000489037 RANBP3Q9H6Z4 567 aaPredicted RBP11.53□□□□□ -0.56
BRCA1-218ENST00000489037 LINC00574Q9H8X3 128 aa11.53□□□□□ -0.56
BRCA1-218ENST00000489037 KCNIP1Q9NZI2 227 aa11.53□□□□□ -0.56
BRCA1-218ENST00000489037 AK6Q9Y3D8 172 aaKnown RBP11.53□□□□□ -0.56
BRCA1-218ENST00000489037 UBE2QL1A1L167 161 aa11.52□□□□□ -0.57
BRCA1-218ENST00000489037 OOSP1A8MZH6 123 aa11.52□□□□□ -0.57
BRCA1-218ENST00000489037 J3QR06 171 aa11.52□□□□□ -0.57
BRCA1-218ENST00000489037 SLC22A1O15245 554 aa11.52□□□□□ -0.57
BRCA1-218ENST00000489037 SPINT2O43291 252 aa11.52□□□□□ -0.57
BRCA1-218ENST00000489037 VSIG8P0DPA2 414 aa11.52□□□□□ -0.57
BRCA1-218ENST00000489037 MYL9P24844 172 aa11.52□□□□□ -0.57
BRCA1-218ENST00000489037 SSTR5P35346 364 aa11.52□□□□□ -0.57
BRCA1-218ENST00000489037 KIR2DS4P43632 304 aa11.52□□□□□ -0.57
BRCA1-218ENST00000489037 RAB11BQ15907 218 aa11.52□□□□□ -0.57
BRCA1-218ENST00000489037 NKAPLQ5M9Q1 402 aa11.52□□□□□ -0.57
BRCA1-218ENST00000489037 LDLRAD2Q5SZI1 272 aa11.52□□□□□ -0.57
BRCA1-218ENST00000489037 TPTE2P1Q5T6R2 138 aa11.52□□□□□ -0.57
BRCA1-218ENST00000489037 SYT6Q5T7P8 510 aaPredicted RBP11.52□□□□□ -0.57
BRCA1-218ENST00000489037 C11orf88Q6PI97 169 aa11.52□□□□□ -0.57
BRCA1-218ENST00000489037 OR52M1Q8NGK5 317 aa11.52□□□□□ -0.57
BRCA1-218ENST00000489037 PIFOQ8TCI5 191 aa11.52□□□□□ -0.57
BRCA1-218ENST00000489037 WFDC12Q8WWY7 111 aa11.52□□□□□ -0.57
BRCA1-218ENST00000489037 RPEQ96AT9 228 aa11.52□□□□□ -0.57
BRCA1-218ENST00000489037 URM1Q9BTM9 101 aaKnown RBP11.52□□□□□ -0.57
BRCA1-218ENST00000489037 FBLN5Q9UBX5 448 aa11.52□□□□□ -0.57
BRCA1-218ENST00000489037 A6NDX4 124 aa11.51□□□□□ -0.57
BRCA1-218ENST00000489037 CCRL2O00421 344 aa11.51□□□□□ -0.57
BRCA1-218ENST00000489037 SDCBPO00560 298 aaPredicted RBP11.51□□□□□ -0.57
BRCA1-218ENST00000489037 SLC17A2O00624 439 aa11.51□□□□□ -0.57
BRCA1-218ENST00000489037 ARSBP15848 533 aa11.51□□□□□ -0.57
BRCA1-218ENST00000489037 PSMB9P28065 219 aa11.51□□□□□ -0.57
BRCA1-218ENST00000489037 GNG10P50151 68 aa11.51□□□□□ -0.57
BRCA1-218ENST00000489037 RPS27AP62979 156 aaKnown RBP11.51□□□□□ -0.57
BRCA1-218ENST00000489037 TMEM30BQ3MIR4 351 aa11.51□□□□□ -0.57
BRCA1-218ENST00000489037 ARSJQ5FYB0 599 aaPredicted RBP11.51□□□□□ -0.57
BRCA1-218ENST00000489037 OR10K2Q6IF99 312 aa11.51□□□□□ -0.57
BRCA1-218ENST00000489037 OR2W3Q7Z3T1 314 aa11.51□□□□□ -0.57
BRCA1-218ENST00000489037 SPARTQ8N0X7 666 aa11.51□□□□□ -0.57
BRCA1-218ENST00000489037 OR10X1Q8NGY0 326 aa11.51□□□□□ -0.57
BRCA1-218ENST00000489037 OR4K15Q8NH41 348 aa11.51□□□□□ -0.57
BRCA1-218ENST00000489037 LEAP2Q969E1 77 aa11.51□□□□□ -0.57
BRCA1-218ENST00000489037 TOMM40LQ969M1 308 aa11.51□□□□□ -0.57
BRCA1-218ENST00000489037 AKR1E2Q96JD6 320 aa11.51□□□□□ -0.57
BRCA1-218ENST00000489037 NDUFB11Q9NX14 153 aa11.51□□□□□ -0.57
BRCA1-218ENST00000489037 PSG11Q9UQ72 335 aa11.51□□□□□ -0.57
BRCA1-218ENST00000489037 V9GY05 133 aa11.51□□□□□ -0.57
BRCA1-218ENST00000489037 IGHV3-7P01780 117 aa11.5□□□□□ -0.57
BRCA1-218ENST00000489037 CD37P11049 281 aa11.5□□□□□ -0.57
BRCA1-218ENST00000489037 GALP22466 123 aa11.5□□□□□ -0.57
BRCA1-218ENST00000489037 IL3RAP26951 378 aa11.5□□□□□ -0.57
BRCA1-218ENST00000489037 PROK1P58294 105 aa11.5□□□□□ -0.57
BRCA1-218ENST00000489037 MADCAM1Q13477 382 aa11.5□□□□□ -0.57
BRCA1-218ENST00000489037 P2RY14Q15391 338 aa11.5□□□□□ -0.57
BRCA1-218ENST00000489037 SSX1Q16384 188 aa11.5□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms