RNA–Protein interactions for RNA: ENST00000488910.1

ATG3-205, Transcript of autophagy related 3, humanhuman

TSL 2

Gene ATG3, Length 681 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG3-205ENST00000488910 SERTAD4Q9NUC0 356 aa14.02□□□□□ -0.17
ATG3-205ENST00000488910 RCC2Q9P258 522 aaKnown RBP14.02□□□□□ -0.17
ATG3-205ENST00000488910 PSG11Q9UQ72 335 aa14.02□□□□□ -0.17
ATG3-205ENST00000488910 VWFP04275 2813 aa14.02□□□□□ -0.17
ATG3-205ENST00000488910 ORC5O43913 435 aa14.01□□□□□ -0.17
ATG3-205ENST00000488910 VSIG10L2P0DP72 767 aa14.01□□□□□ -0.17
ATG3-205ENST00000488910 SSTR5P35346 364 aa14.01□□□□□ -0.17
ATG3-205ENST00000488910 BLCAPP62952 87 aa14.01□□□□□ -0.17
ATG3-205ENST00000488910 UTF1Q5T230 341 aa14.01□□□□□ -0.17
ATG3-205ENST00000488910 OR52M1Q8NGK5 317 aa14.01□□□□□ -0.17
ATG3-205ENST00000488910 CAPSLQ8WWF8 208 aa14.01□□□□□ -0.17
ATG3-205ENST00000488910 SGCDQ92629 289 aa14.01□□□□□ -0.17
ATG3-205ENST00000488910 RPEQ96AT9 228 aa14.01□□□□□ -0.17
ATG3-205ENST00000488910 TMED9Q9BVK6 235 aa14.01□□□□□ -0.17
ATG3-205ENST00000488910 SELENOIQ9C0D9 397 aa14.01□□□□□ -0.17
ATG3-205ENST00000488910 RAB9BQ9NP90 201 aa14.01□□□□□ -0.17
ATG3-205ENST00000488910 ISYNA1Q9NPH2 558 aa14.01□□□□□ -0.17
ATG3-205ENST00000488910 TET2Q6N021 2002 aaPredicted RBP14.01□□□□□ -0.17
ATG3-205ENST00000488910 TRAV39A0A0B4J263 110 aa14□□□□□ -0.17
ATG3-205ENST00000488910 ERICH4A6NGS2 130 aa14□□□□□ -0.17
ATG3-205ENST00000488910 RGS10O43665 173 aa14□□□□□ -0.17
ATG3-205ENST00000488910 CA11O75493 328 aa14□□□□□ -0.17
ATG3-205ENST00000488910 CRTAPO75718 401 aaPredicted RBP14□□□□□ -0.17
ATG3-205ENST00000488910 SC5DO75845 299 aa14□□□□□ -0.17
ATG3-205ENST00000488910 CSF1P09603 554 aa14□□□□□ -0.17
ATG3-205ENST00000488910 UBBP0CG47 229 aa14□□□□□ -0.17
ATG3-205ENST00000488910 FAM106CPP0CH98 169 aa14□□□□□ -0.17
ATG3-205ENST00000488910 MGMTP16455 207 aa14□□□□□ -0.17
ATG3-205ENST00000488910 SRMP19623 302 aa14□□□□□ -0.17
ATG3-205ENST00000488910 FUT3P21217 361 aa14□□□□□ -0.17
ATG3-205ENST00000488910 GP2P55259 537 aaKnown RBP14□□□□□ -0.17
ATG3-205ENST00000488910 MADCAM1Q13477 382 aa14□□□□□ -0.17
ATG3-205ENST00000488910 LTC4SQ16873 150 aa14□□□□□ -0.17
ATG3-205ENST00000488910 GLT8D1Q68CQ7 371 aa14□□□□□ -0.17
ATG3-205ENST00000488910 RAB12Q6IQ22 244 aa14□□□□□ -0.17
ATG3-205ENST00000488910 CEACAM19Q7Z692 300 aa14□□□□□ -0.17
ATG3-205ENST00000488910 THNSL2Q86YJ6 484 aa14□□□□□ -0.17
ATG3-205ENST00000488910 TMEM104Q8NE00 496 aa14□□□□□ -0.17
ATG3-205ENST00000488910 UFD1Q92890 307 aa14□□□□□ -0.17
ATG3-205ENST00000488910 ARL11Q969Q4 196 aa14□□□□□ -0.17
ATG3-205ENST00000488910 RBM14Q96PK6 669 aaKnown RBP14□□□□□ -0.17
ATG3-205ENST00000488910 CST11Q9H112 138 aa14□□□□□ -0.17
ATG3-205ENST00000488910 BANF2Q9H503 90 aa14□□□□□ -0.17
ATG3-205ENST00000488910 PEX16Q9Y5Y5 336 aa14□□□□□ -0.17
ATG3-205ENST00000488910 C15orf65H3BRN8 121 aa13.99□□□□□ -0.17
ATG3-205ENST00000488910 AIPO00170 330 aa13.99□□□□□ -0.17
ATG3-205ENST00000488910 PEX14O75381 377 aa13.99□□□□□ -0.17
ATG3-205ENST00000488910 OR2F2O95006 317 aa13.99□□□□□ -0.17
ATG3-205ENST00000488910 CRHBPP24387 322 aa13.99□□□□□ -0.17
ATG3-205ENST00000488910 CD24P25063 80 aa13.99□□□□□ -0.17
ATG3-205ENST00000488910 TPBGQ13641 420 aa13.99□□□□□ -0.17
ATG3-205ENST00000488910 HABP2Q14520 560 aaPredicted RBP13.99□□□□□ -0.17
ATG3-205ENST00000488910 INSL4Q14641 139 aa13.99□□□□□ -0.17
ATG3-205ENST00000488910 TRAM1Q15629 374 aa13.99□□□□□ -0.17
ATG3-205ENST00000488910 ARSJQ5FYB0 599 aaPredicted RBP13.99□□□□□ -0.17
ATG3-205ENST00000488910 FAM27D1Q5T7N8 215 aa13.99□□□□□ -0.17
ATG3-205ENST00000488910 LIPKQ5VXJ0 399 aa13.99□□□□□ -0.17
ATG3-205ENST00000488910 PRSS48Q7RTY5 328 aa13.99□□□□□ -0.17
ATG3-205ENST00000488910 LRRTM1Q86UE6 522 aa13.99□□□□□ -0.17
ATG3-205ENST00000488910 C8orf31Q8N9H6 132 aa13.99□□□□□ -0.17
ATG3-205ENST00000488910 CCDC107Q8WV48 283 aa13.99□□□□□ -0.17
ATG3-205ENST00000488910 LEAP2Q969E1 77 aa13.99□□□□□ -0.17
ATG3-205ENST00000488910 TOMM40LQ969M1 308 aa13.99□□□□□ -0.17
ATG3-205ENST00000488910 Q96M66 194 aa13.99□□□□□ -0.17
ATG3-205ENST00000488910 WNT10AQ9GZT5 417 aa13.99□□□□□ -0.17
ATG3-205ENST00000488910 ETAA1Q9NY74 926 aa13.99□□□□□ -0.17
ATG3-205ENST00000488910 FAM90A9PA6NNJ1 464 aa13.98□□□□□ -0.17
ATG3-205ENST00000488910 IGHV3-7P01780 117 aa13.98□□□□□ -0.17
ATG3-205ENST00000488910 UCHL1P09936 223 aa13.98□□□□□ -0.17
ATG3-205ENST00000488910 CD37P11049 281 aa13.98□□□□□ -0.17
ATG3-205ENST00000488910 VDAC2P45880 294 aaPredicted RBP13.98□□□□□ -0.17
ATG3-205ENST00000488910 RAB7AP51149 207 aa13.98□□□□□ -0.17
ATG3-205ENST00000488910 Q3ZCU0 254 aa13.98□□□□□ -0.17
ATG3-205ENST00000488910 HSD17B12Q53GQ0 312 aa13.98□□□□□ -0.17
ATG3-205ENST00000488910 RBM48Q5RL73 367 aaKnown RBP13.98□□□□□ -0.17
ATG3-205ENST00000488910 C1orf100Q5SVJ3 147 aa13.98□□□□□ -0.17
ATG3-205ENST00000488910 IZUMO2Q6UXV1 221 aa13.98□□□□□ -0.17
ATG3-205ENST00000488910 OR8H3Q8N146 312 aa13.98□□□□□ -0.17
ATG3-205ENST00000488910 GAPTQ8N292 157 aa13.98□□□□□ -0.17
ATG3-205ENST00000488910 LINC00311Q8N616 119 aa13.98□□□□□ -0.17
ATG3-205ENST00000488910 OR10X1Q8NGY0 326 aa13.98□□□□□ -0.17
ATG3-205ENST00000488910 SLC25A33Q9BSK2 321 aa13.98□□□□□ -0.17
ATG3-205ENST00000488910 TRAPPC2LQ9UL33 140 aa13.98□□□□□ -0.17
ATG3-205ENST00000488910 MEGF8Q7Z7M0 2845 aa13.97□□□□□ -0.17
ATG3-205ENST00000488910 M0QZK8 103 aa13.97□□□□□ -0.17
ATG3-205ENST00000488910 SDCBPO00560 298 aaPredicted RBP13.97□□□□□ -0.17
ATG3-205ENST00000488910 SPINT2O43291 252 aa13.97□□□□□ -0.17
ATG3-205ENST00000488910 PDCD6O75340 191 aa13.97□□□□□ -0.17
ATG3-205ENST00000488910 TSPAN15O95858 294 aa13.97□□□□□ -0.17
ATG3-205ENST00000488910 HSMCR30P0CW71 290 aa13.97□□□□□ -0.17
ATG3-205ENST00000488910 PSMA1P25786 263 aaKnown RBP13.97□□□□□ -0.17
ATG3-205ENST00000488910 GNG10P50151 68 aa13.97□□□□□ -0.17
ATG3-205ENST00000488910 LOXL3P58215 753 aa13.97□□□□□ -0.17
ATG3-205ENST00000488910 MLLT11Q13015 90 aaPredicted RBP13.97□□□□□ -0.17
ATG3-205ENST00000488910 TMEM30BQ3MIR4 351 aa13.97□□□□□ -0.17
ATG3-205ENST00000488910 C6orf183Q5T699 404 aa13.97□□□□□ -0.17
ATG3-205ENST00000488910 SYT6Q5T7P8 510 aaPredicted RBP13.97□□□□□ -0.17
ATG3-205ENST00000488910 TRAT1Q6PIZ9 186 aa13.97□□□□□ -0.17
ATG3-205ENST00000488910 Q6ZS46 218 aa13.97□□□□□ -0.17
ATG3-205ENST00000488910 WIPF2Q8TF74 440 aaPredicted RBP13.97□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms