RNA–Protein interactions for RNA: ENST00000488865.2

RNF220-216, Transcript of ring finger protein 220, humanhuman

TSL 2

Gene RNF220, Length 860 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF220-216ENST00000488865 OR52M1Q8NGK5 317 aa20.52■□□□□ 0.88
RNF220-216ENST00000488865 OR52N1Q8NH53 320 aa20.52■□□□□ 0.88
RNF220-216ENST00000488865 PAK1IP1Q9NWT1 392 aaPredicted RBP20.52■□□□□ 0.88
RNF220-216ENST00000488865 ZNF581Q9P0T4 197 aa20.52■□□□□ 0.88
RNF220-216ENST00000488865 TMEM30CPA0ZSE6 113 aa20.51■□□□□ 0.87
RNF220-216ENST00000488865 ZNF93P35789 620 aaPredicted RBP20.51■□□□□ 0.87
RNF220-216ENST00000488865 MYCNOSP40205 109 aa20.51■□□□□ 0.87
RNF220-216ENST00000488865 LINC00311Q8N616 119 aa20.51■□□□□ 0.87
RNF220-216ENST00000488865 C8orf31Q8N9H6 132 aa20.51■□□□□ 0.87
RNF220-216ENST00000488865 IGHV1-3A0A0C4DH29 117 aa20.5■□□□□ 0.87
RNF220-216ENST00000488865 A0A1W2PPE3 182 aa20.5■□□□□ 0.87
RNF220-216ENST00000488865 C15orf65H3BRN8 121 aa20.5■□□□□ 0.87
RNF220-216ENST00000488865 CCRL2O00421 344 aa20.5■□□□□ 0.87
RNF220-216ENST00000488865 MPV17LQ2QL34 196 aa20.5■□□□□ 0.87
RNF220-216ENST00000488865 DDI2Q5TDH0 399 aa20.5■□□□□ 0.87
RNF220-216ENST00000488865 XAF1Q6GPH4 301 aa20.5■□□□□ 0.87
RNF220-216ENST00000488865 C8orf86Q6ZUL3 223 aa20.5■□□□□ 0.87
RNF220-216ENST00000488865 MOB3BQ86TA1 216 aa20.5■□□□□ 0.87
RNF220-216ENST00000488865 IZUMO1Q8IYV9 350 aa20.5■□□□□ 0.87
RNF220-216ENST00000488865 STPG2Q8N412 459 aa20.5■□□□□ 0.87
RNF220-216ENST00000488865 S100A13Q99584 98 aa20.5■□□□□ 0.87
RNF220-216ENST00000488865 LINC00527Q9UJ94 153 aa20.5■□□□□ 0.87
RNF220-216ENST00000488865 NUDT19A8MXV4 375 aa20.49■□□□□ 0.87
RNF220-216ENST00000488865 GEMIN2O14893 280 aaKnown RBP20.49■□□□□ 0.87
RNF220-216ENST00000488865 ZNF780AO75290 641 aaPredicted RBP20.49■□□□□ 0.87
RNF220-216ENST00000488865 DCKP27707 260 aa20.49■□□□□ 0.87
RNF220-216ENST00000488865 TMPRSS11AQ6ZMR5 421 aa20.49■□□□□ 0.87
RNF220-216ENST00000488865 C18orf65Q6ZTR6 163 aa20.49■□□□□ 0.87
RNF220-216ENST00000488865 TGIF2LXQ8IUE1 241 aa20.49■□□□□ 0.87
RNF220-216ENST00000488865 ARL11Q969Q4 196 aa20.49■□□□□ 0.87
RNF220-216ENST00000488865 EAF1Q96JC9 268 aaPredicted RBP20.49■□□□□ 0.87
RNF220-216ENST00000488865 P2RX4Q99571 388 aa20.49■□□□□ 0.87
RNF220-216ENST00000488865 ORC5O43913 435 aa20.48■□□□□ 0.87
RNF220-216ENST00000488865 WBP4O75554 376 aaKnown RBP20.48■□□□□ 0.87
RNF220-216ENST00000488865 BDKRB2P30411 391 aa20.48■□□□□ 0.87
RNF220-216ENST00000488865 ETV1P50549 477 aa20.48■□□□□ 0.87
RNF220-216ENST00000488865 Q8N6K4 173 aa20.48■□□□□ 0.87
RNF220-216ENST00000488865 KLHL30-AS1Q8NEE0 82 aa20.48■□□□□ 0.87
RNF220-216ENST00000488865 OR2T10Q8NGZ9 312 aa20.48■□□□□ 0.87
RNF220-216ENST00000488865 LIN7CQ9NUP9 197 aaKnown RBP20.48■□□□□ 0.87
RNF220-216ENST00000488865 AP4M1O00189 453 aa20.47■□□□□ 0.87
RNF220-216ENST00000488865 SDCBPO00560 298 aaPredicted RBP20.47■□□□□ 0.87
RNF220-216ENST00000488865 OGG1O15527 345 aa20.47■□□□□ 0.87
RNF220-216ENST00000488865 SERPINA2P20848 420 aa20.47■□□□□ 0.87
RNF220-216ENST00000488865 REG1BP48304 166 aa20.47■□□□□ 0.87
RNF220-216ENST00000488865 Q3ZCU0 254 aa20.47■□□□□ 0.87
RNF220-216ENST00000488865 OR2G6Q5TZ20 316 aa20.47■□□□□ 0.87
RNF220-216ENST00000488865 TEX38Q6PEX7 206 aa20.47■□□□□ 0.87
RNF220-216ENST00000488865 ZNF695Q8IW36 515 aa20.47■□□□□ 0.87
RNF220-216ENST00000488865 PQLC1Q8N2U9 271 aa20.47■□□□□ 0.87
RNF220-216ENST00000488865 SMIM19Q96E16 107 aa20.47■□□□□ 0.87
RNF220-216ENST00000488865 ABCG5Q9H222 651 aa20.47■□□□□ 0.87
RNF220-216ENST00000488865 S100A14Q9HCY8 104 aa20.47■□□□□ 0.87
RNF220-216ENST00000488865 GFOD1Q9NXC2 390 aa20.47■□□□□ 0.87
RNF220-216ENST00000488865 ZMAT5Q9UDW3 170 aaKnown RBP20.47■□□□□ 0.87
RNF220-216ENST00000488865 DNAH9Q9NYC9 4486 aa20.46■□□□□ 0.87
RNF220-216ENST00000488865 NCBP2LA6PVI3 153 aaKnown RBP20.46■□□□□ 0.87
RNF220-216ENST00000488865 GTF2F2P13984 249 aa20.46■□□□□ 0.87
RNF220-216ENST00000488865 IL3RAP26951 378 aa20.46■□□□□ 0.87
RNF220-216ENST00000488865 CD1BP29016 333 aa20.46■□□□□ 0.87
RNF220-216ENST00000488865 DCTN2Q13561 401 aaKnown RBP20.46■□□□□ 0.87
RNF220-216ENST00000488865 SMN1Q16637 294 aaKnown RBP20.46■□□□□ 0.87
RNF220-216ENST00000488865 ATAD3CQ5T2N8 411 aa20.46■□□□□ 0.87
RNF220-216ENST00000488865 ZNF497Q6ZNH5 498 aa20.46■□□□□ 0.87
RNF220-216ENST00000488865 ST6GALNAC6Q969X2 333 aa20.46■□□□□ 0.87
RNF220-216ENST00000488865 GON7Q9BXV9 100 aa20.46■□□□□ 0.87
RNF220-216ENST00000488865 BABAM2Q9NXR7 383 aa20.46■□□□□ 0.87
RNF220-216ENST00000488865 SIRT4Q9Y6E7 314 aaPredicted RBP20.46■□□□□ 0.87
RNF220-216ENST00000488865 IGHV3-72A0A0B4J1Y9 119 aa20.45■□□□□ 0.86
RNF220-216ENST00000488865 IRGMA1A4Y4 181 aa20.45■□□□□ 0.86
RNF220-216ENST00000488865 LINC01548A6NM66 108 aa20.45■□□□□ 0.86
RNF220-216ENST00000488865 GPX5O75715 221 aa20.45■□□□□ 0.86
RNF220-216ENST00000488865 MT-ND4P03905 459 aa20.45■□□□□ 0.86
RNF220-216ENST00000488865 IGFBP3P17936 291 aaPredicted RBP20.45■□□□□ 0.86
RNF220-216ENST00000488865 GPR12P47775 334 aa20.45■□□□□ 0.86
RNF220-216ENST00000488865 RIPK1Q13546 671 aa20.45■□□□□ 0.86
RNF220-216ENST00000488865 GPR176Q14439 515 aa20.45■□□□□ 0.86
RNF220-216ENST00000488865 SLC22A6Q4U2R8 563 aa20.45■□□□□ 0.86
RNF220-216ENST00000488865 C11orf87Q6NUJ2 197 aa20.45■□□□□ 0.86
RNF220-216ENST00000488865 UNQ9370/PRO34162Q6UXP9 181 aa20.45■□□□□ 0.86
RNF220-216ENST00000488865 Q8N9W7 124 aa20.45■□□□□ 0.86
RNF220-216ENST00000488865 TMEM104Q8NE00 496 aa20.45■□□□□ 0.86
RNF220-216ENST00000488865 ZNF555Q8NEP9 628 aa20.45■□□□□ 0.86
RNF220-216ENST00000488865 NEK7Q8TDX7 302 aa20.45■□□□□ 0.86
RNF220-216ENST00000488865 CCDC107Q8WV48 283 aa20.45■□□□□ 0.86
RNF220-216ENST00000488865 RTN4IP1Q8WWV3 396 aaPredicted RBP20.45■□□□□ 0.86
RNF220-216ENST00000488865 RDH12Q96NR8 316 aa20.45■□□□□ 0.86
RNF220-216ENST00000488865 ZNF184Q99676 751 aaPredicted RBP20.45■□□□□ 0.86
RNF220-216ENST00000488865 H0YHG0 523 aa20.44■□□□□ 0.86
RNF220-216ENST00000488865 GP2P55259 537 aaKnown RBP20.44■□□□□ 0.86
RNF220-216ENST00000488865 CD69Q07108 199 aa20.44■□□□□ 0.86
RNF220-216ENST00000488865 PNLIPRP3Q17RR3 467 aa20.44■□□□□ 0.86
RNF220-216ENST00000488865 STX19Q8N4C7 294 aa20.44■□□□□ 0.86
RNF220-216ENST00000488865 B9D2Q9BPU9 175 aa20.44■□□□□ 0.86
RNF220-216ENST00000488865 SPACA1Q9HBV2 294 aa20.44■□□□□ 0.86
RNF220-216ENST00000488865 RAB9BQ9NP90 201 aa20.44■□□□□ 0.86
RNF220-216ENST00000488865 TRBV5-5A0A0J9YX44 114 aa20.43■□□□□ 0.86
RNF220-216ENST00000488865 AIPO00170 330 aa20.43■□□□□ 0.86
RNF220-216ENST00000488865 MYL12AP19105 171 aa20.43■□□□□ 0.86
RNF220-216ENST00000488865 TMEM30BQ3MIR4 351 aa20.43■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 65 ms