RNA–Protein interactions for RNA: ENST00000488864.5

CHD1L-208, Transcript of chromodomain helicase DNA binding protein 1 like, humanhuman

TSL 2

Gene CHD1L, Length 2,415 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1L-208ENST00000488864 CRIP3Q6Q6R5 217 aa11.38□□□□□ -0.59
CHD1L-208ENST00000488864 SEMA6DQ8NFY4 1073 aa11.38□□□□□ -0.59
CHD1L-208ENST00000488864 NPRL2Q8WTW4 380 aa11.38□□□□□ -0.59
CHD1L-208ENST00000488864 BCL2L2Q92843 193 aaPredicted RBP11.38□□□□□ -0.59
CHD1L-208ENST00000488864 PECRQ9BY49 303 aa11.38□□□□□ -0.59
CHD1L-208ENST00000488864 FOXI3A8MTJ6 420 aaPredicted RBP11.37□□□□□ -0.59
CHD1L-208ENST00000488864 GATCO43716 136 aaKnown RBP11.37□□□□□ -0.59
CHD1L-208ENST00000488864 MMP7P09237 267 aaPredicted RBP11.37□□□□□ -0.59
CHD1L-208ENST00000488864 CCL2P13500 99 aa11.37□□□□□ -0.59
CHD1L-208ENST00000488864 BLVRBP30043 206 aaPredicted RBP11.37□□□□□ -0.59
CHD1L-208ENST00000488864 TAS2R46P59540 309 aa11.37□□□□□ -0.59
CHD1L-208ENST00000488864 RAB1AP62820 205 aa11.37□□□□□ -0.59
CHD1L-208ENST00000488864 FAM27E3Q08E93 113 aa11.37□□□□□ -0.59
CHD1L-208ENST00000488864 BEND4Q6ZU67 534 aa11.37□□□□□ -0.59
CHD1L-208ENST00000488864 FAM89BQ8N5H3 189 aa11.37□□□□□ -0.59
CHD1L-208ENST00000488864 YPEL4Q96NS1 127 aa11.37□□□□□ -0.59
CHD1L-208ENST00000488864 URM1Q9BTM9 101 aaKnown RBP11.37□□□□□ -0.59
CHD1L-208ENST00000488864 OR2H1Q9GZK4 316 aa11.37□□□□□ -0.59
CHD1L-208ENST00000488864 WNT5BQ9H1J7 359 aa11.37□□□□□ -0.59
CHD1L-208ENST00000488864 C19orf12Q9NSK7 152 aa11.37□□□□□ -0.59
CHD1L-208ENST00000488864 CHD6Q8TD26 2715 aa11.37□□□□□ -0.59
CHD1L-208ENST00000488864 CNOT4O95628 575 aaKnown RBP11.37□□□□□ -0.59
CHD1L-208ENST00000488864 MBPP02686 304 aaPredicted RBP11.37□□□□□ -0.59
CHD1L-208ENST00000488864 COX5AP20674 150 aa11.37□□□□□ -0.59
CHD1L-208ENST00000488864 GNLYP22749 145 aa11.37□□□□□ -0.59
CHD1L-208ENST00000488864 GABRA6Q16445 453 aa11.37□□□□□ -0.59
CHD1L-208ENST00000488864 SP6Q3SY56 376 aa11.37□□□□□ -0.59
CHD1L-208ENST00000488864 CPEB3Q8NE35 698 aaKnown RBP11.37□□□□□ -0.59
CHD1L-208ENST00000488864 ZNF2Q9BSG1 426 aaPredicted RBP11.37□□□□□ -0.59
CHD1L-208ENST00000488864 HDHD3Q9BSH5 251 aaPredicted RBP11.37□□□□□ -0.59
CHD1L-208ENST00000488864 RALYQ9UKM9 306 aaKnown RBP11.37□□□□□ -0.59
CHD1L-208ENST00000488864 DHRS7CA6NNS2 312 aa11.36□□□□□ -0.59
CHD1L-208ENST00000488864 A8MXE2 369 aa11.36□□□□□ -0.59
CHD1L-208ENST00000488864 XRCC2O43543 280 aa11.36□□□□□ -0.59
CHD1L-208ENST00000488864 ZNF205O95201 554 aa11.36□□□□□ -0.59
CHD1L-208ENST00000488864 CCNOP22674 350 aa11.36□□□□□ -0.59
CHD1L-208ENST00000488864 RPS23P62266 143 aaKnown RBP11.36□□□□□ -0.59
CHD1L-208ENST00000488864 RSPO1Q2MKA7 263 aaPredicted RBP11.36□□□□□ -0.59
CHD1L-208ENST00000488864 NRN1LQ496H8 165 aa11.36□□□□□ -0.59
CHD1L-208ENST00000488864 SSC4DQ8WTU2 575 aa11.36□□□□□ -0.59
CHD1L-208ENST00000488864 RARRES2Q99969 163 aa11.36□□□□□ -0.59
CHD1L-208ENST00000488864 TOLLIPQ9H0E2 274 aa11.36□□□□□ -0.59
CHD1L-208ENST00000488864 ZNF701Q9NV72 531 aaPredicted RBP11.36□□□□□ -0.59
CHD1L-208ENST00000488864 RFNGQ9Y644 331 aa11.36□□□□□ -0.59
CHD1L-208ENST00000488864 MSTNO14793 375 aa11.36□□□□□ -0.59
CHD1L-208ENST00000488864 SYNGR3O43761 229 aa11.36□□□□□ -0.59
CHD1L-208ENST00000488864 DIRAS3O95661 229 aa11.36□□□□□ -0.59
CHD1L-208ENST00000488864 SEC11BP0C7V7 166 aa11.36□□□□□ -0.59
CHD1L-208ENST00000488864 LMO1P25800 156 aa11.36□□□□□ -0.59
CHD1L-208ENST00000488864 PPP1CCP36873 323 aaKnown RBP11.36□□□□□ -0.59
CHD1L-208ENST00000488864 PCBD1P61457 104 aa11.36□□□□□ -0.59
CHD1L-208ENST00000488864 HIST1H3AP68431 136 aa11.36□□□□□ -0.59
CHD1L-208ENST00000488864 RHEBQ15382 184 aa11.36□□□□□ -0.59
CHD1L-208ENST00000488864 PYY3Q5JQD4 70 aa11.36□□□□□ -0.59
CHD1L-208ENST00000488864 HIST2H3PS2Q5TEC6 136 aa11.36□□□□□ -0.59
CHD1L-208ENST00000488864 TMEM211Q6ICI0 200 aa11.36□□□□□ -0.59
CHD1L-208ENST00000488864 HIST2H3AQ71DI3 136 aa11.36□□□□□ -0.59
CHD1L-208ENST00000488864 FAM57BQ71RH2 274 aa11.36□□□□□ -0.59
CHD1L-208ENST00000488864 MDP1Q86V88 176 aa11.36□□□□□ -0.59
CHD1L-208ENST00000488864 COMMD1Q8N668 190 aa11.36□□□□□ -0.59
CHD1L-208ENST00000488864 ZNF283Q8N7M2 679 aa11.36□□□□□ -0.59
CHD1L-208ENST00000488864 OR1J1Q8NGS3 322 aa11.36□□□□□ -0.59
CHD1L-208ENST00000488864 HPSE2Q8WWQ2 592 aa11.36□□□□□ -0.59
CHD1L-208ENST00000488864 GINS3Q9BRX5 216 aa11.36□□□□□ -0.59
CHD1L-208ENST00000488864 LIME1Q9H400 295 aa11.36□□□□□ -0.59
CHD1L-208ENST00000488864 ZDHHC8Q9ULC8 765 aa11.36□□□□□ -0.59
CHD1L-208ENST00000488864 DMRT1Q9Y5R6 373 aa11.36□□□□□ -0.59
CHD1L-208ENST00000488864 PUS1Q9Y606 427 aaKnown RBP eCLIP11.36□□□□□ -0.59
CHD1L-208ENST00000488864 ZNF729A6NN14 1252 aaPredicted RBP11.35□□□□□ -0.59
CHD1L-208ENST00000488864 AGFG2O95081 481 aa11.35□□□□□ -0.59
CHD1L-208ENST00000488864 OR2C1O95371 312 aa11.35□□□□□ -0.59
CHD1L-208ENST00000488864 PRH1P02810 166 aa11.35□□□□□ -0.59
CHD1L-208ENST00000488864 HOXA5P20719 270 aa11.35□□□□□ -0.59
CHD1L-208ENST00000488864 SERPINA2P20848 420 aa11.35□□□□□ -0.59
CHD1L-208ENST00000488864 RAB2AP61019 212 aa11.35□□□□□ -0.59
CHD1L-208ENST00000488864 UBE2NP61088 152 aaKnown RBP11.35□□□□□ -0.59
CHD1L-208ENST00000488864 SURF2Q15527 256 aaPredicted RBP11.35□□□□□ -0.59
CHD1L-208ENST00000488864 HEPN1Q6WQI6 88 aa11.35□□□□□ -0.59
CHD1L-208ENST00000488864 SGPP2Q8IWX5 399 aa11.35□□□□□ -0.59
CHD1L-208ENST00000488864 OR1F12Q8NHA8 337 aa11.35□□□□□ -0.59
CHD1L-208ENST00000488864 SLC35B3Q9H1N7 401 aa11.35□□□□□ -0.59
CHD1L-208ENST00000488864 KCNJ16Q9NPI9 418 aa11.35□□□□□ -0.59
CHD1L-208ENST00000488864 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP11.35□□□□□ -0.59
CHD1L-208ENST00000488864 CADP27708 2225 aa11.35□□□□□ -0.59
CHD1L-208ENST00000488864 CRYM-AS1A6NIL9 109 aa11.35□□□□□ -0.59
CHD1L-208ENST00000488864 ZNF727A8MUV8 499 aa11.35□□□□□ -0.59
CHD1L-208ENST00000488864 LY86O95711 162 aa11.35□□□□□ -0.59
CHD1L-208ENST00000488864 IFNA21P01568 189 aa11.35□□□□□ -0.59
CHD1L-208ENST00000488864 IFNA17P01571 189 aa11.35□□□□□ -0.59
CHD1L-208ENST00000488864 MAS1LP35410 378 aa11.35□□□□□ -0.59
CHD1L-208ENST00000488864 KIAA0141Q14154 515 aaPredicted RBP11.35□□□□□ -0.59
CHD1L-208ENST00000488864 P2RY6Q15077 328 aa11.35□□□□□ -0.59
CHD1L-208ENST00000488864 RAB35Q15286 201 aa11.35□□□□□ -0.59
CHD1L-208ENST00000488864 BHLHA15Q7RTS1 189 aaPredicted RBP11.35□□□□□ -0.59
CHD1L-208ENST00000488864 C6orf201Q7Z4U5 140 aa11.35□□□□□ -0.59
CHD1L-208ENST00000488864 MYPOPQ86VE0 399 aaPredicted RBP11.35□□□□□ -0.59
CHD1L-208ENST00000488864 HSD17B11Q8NBQ5 300 aa11.35□□□□□ -0.59
CHD1L-208ENST00000488864 PFDN5Q99471 154 aa11.35□□□□□ -0.59
CHD1L-208ENST00000488864 PLEKHA2Q9HB19 425 aa11.35□□□□□ -0.59
CHD1L-208ENST00000488864 RCL1Q9Y2P8 373 aaKnown RBP11.35□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 69.4 ms