RNA–Protein interactions for RNA: ENST00000488228.1

UBE4B-210, Transcript of ubiquitination factor E4B, humanhuman

TSL 3

Gene UBE4B, Length 560 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE4B-210ENST00000488228 ETV7Q9Y603 341 aa9.02□□□□□ -0.97
UBE4B-210ENST00000488228 SESN1Q9Y6P5 492 aa9.02□□□□□ -0.97
UBE4B-210ENST00000488228 A0A0U1RQK1 487 aa9.01□□□□□ -0.97
UBE4B-210ENST00000488228 KBTBD11-OT1A0A1B0GTJ5 212 aa9.01□□□□□ -0.97
UBE4B-210ENST00000488228 C12orf77C9JDV5 145 aa9.01□□□□□ -0.97
UBE4B-210ENST00000488228 H3BMQ9 156 aa9.01□□□□□ -0.97
UBE4B-210ENST00000488228 H3BUI4 141 aa9.01□□□□□ -0.97
UBE4B-210ENST00000488228 MFNGO00587 321 aa9.01□□□□□ -0.97
UBE4B-210ENST00000488228 NPFFO15130 113 aa9.01□□□□□ -0.97
UBE4B-210ENST00000488228 NOL3O60936 208 aaKnown RBP9.01□□□□□ -0.97
UBE4B-210ENST00000488228 GLAP06280 429 aa9.01□□□□□ -0.97
UBE4B-210ENST00000488228 HIST1H1DP16402 221 aaKnown RBP9.01□□□□□ -0.97
UBE4B-210ENST00000488228 GNB3P16520 340 aa9.01□□□□□ -0.97
UBE4B-210ENST00000488228 RCC1P18754 421 aaPredicted RBP9.01□□□□□ -0.97
UBE4B-210ENST00000488228 NFYBP25208 207 aa9.01□□□□□ -0.97
UBE4B-210ENST00000488228 SAA4P35542 130 aa9.01□□□□□ -0.97
UBE4B-210ENST00000488228 GUCA2AQ02747 115 aa9.01□□□□□ -0.97
UBE4B-210ENST00000488228 HEPN1Q6WQI6 88 aa9.01□□□□□ -0.97
UBE4B-210ENST00000488228 C5orf24Q7Z6I8 188 aa9.01□□□□□ -0.97
UBE4B-210ENST00000488228 PRIMA1Q86XR5 153 aa9.01□□□□□ -0.97
UBE4B-210ENST00000488228 CROCCP3Q8IVE0 287 aa9.01□□□□□ -0.97
UBE4B-210ENST00000488228 PRR18Q8N4B5 295 aa9.01□□□□□ -0.97
UBE4B-210ENST00000488228 SIGLECL1Q8N7X8 197 aa9.01□□□□□ -0.97
UBE4B-210ENST00000488228 SAMD12Q8N8I0 201 aa9.01□□□□□ -0.97
UBE4B-210ENST00000488228 RFESDQ8TAC1 157 aa9.01□□□□□ -0.97
UBE4B-210ENST00000488228 SETD6Q8TBK2 473 aa9.01□□□□□ -0.97
UBE4B-210ENST00000488228 C17orf50Q8WW18 174 aa9.01□□□□□ -0.97
UBE4B-210ENST00000488228 PTX4Q96A99 478 aa9.01□□□□□ -0.97
UBE4B-210ENST00000488228 ISOC1Q96CN7 298 aa9.01□□□□□ -0.97
UBE4B-210ENST00000488228 KIRREL1Q96J84 757 aa9.01□□□□□ -0.97
UBE4B-210ENST00000488228 TMEM133Q9H2Q1 129 aa9.01□□□□□ -0.97
UBE4B-210ENST00000488228 NCOR1P1Q9H4R4 102 aa9.01□□□□□ -0.97
UBE4B-210ENST00000488228 OCEL1Q9H607 264 aa9.01□□□□□ -0.97
UBE4B-210ENST00000488228 ZMAT3Q9HA38 289 aaKnown RBP9.01□□□□□ -0.97
UBE4B-210ENST00000488228 ZNF286AQ9HBT8 521 aa9.01□□□□□ -0.97
UBE4B-210ENST00000488228 CHMP1AQ9HD42 196 aaPredicted RBP9.01□□□□□ -0.97
UBE4B-210ENST00000488228 TRAPPC2LQ9UL33 140 aa9.01□□□□□ -0.97
UBE4B-210ENST00000488228 KCNK7Q9Y2U2 307 aa9.01□□□□□ -0.97
UBE4B-210ENST00000488228 IGHV2-26A0A0B4J1V2 119 aa9□□□□□ -0.97
UBE4B-210ENST00000488228 IGHV3-43A0A0B4J1X8 118 aa9□□□□□ -0.97
UBE4B-210ENST00000488228 MEIOCA2RUB1 952 aa9□□□□□ -0.97
UBE4B-210ENST00000488228 METTL21EPA6NDL7 271 aa9□□□□□ -0.97
UBE4B-210ENST00000488228 ODF3BA8MYP8 253 aa9□□□□□ -0.97
UBE4B-210ENST00000488228 C15orf65H3BRN8 121 aa9□□□□□ -0.97
UBE4B-210ENST00000488228 CA11O75493 328 aa9□□□□□ -0.97
UBE4B-210ENST00000488228 NAPSAO96009 420 aa9□□□□□ -0.97
UBE4B-210ENST00000488228 IGHV3-7P01780 117 aa9□□□□□ -0.97
UBE4B-210ENST00000488228 CGB3P0DN86 165 aa9□□□□□ -0.97
UBE4B-210ENST00000488228 CGB7P0DN87 165 aa9□□□□□ -0.97
UBE4B-210ENST00000488228 IGHV3-43DP0DP04 118 aa9□□□□□ -0.97
UBE4B-210ENST00000488228 PAX6P26367 422 aa9□□□□□ -0.97
UBE4B-210ENST00000488228 UBE2E1P51965 193 aa9□□□□□ -0.97
UBE4B-210ENST00000488228 TMBIM6P55061 237 aa9□□□□□ -0.97
UBE4B-210ENST00000488228 SCAND1P57086 179 aa9□□□□□ -0.97
UBE4B-210ENST00000488228 SCGB2A2Q13296 93 aa9□□□□□ -0.97
UBE4B-210ENST00000488228 C6orf183Q5T699 404 aa9□□□□□ -0.97
UBE4B-210ENST00000488228 FAM53AQ6NSI3 398 aaPredicted RBP9□□□□□ -0.97
UBE4B-210ENST00000488228 Q6ZTK2 550 aa9□□□□□ -0.97
UBE4B-210ENST00000488228 C9orf139Q6ZV77 190 aa9□□□□□ -0.97
UBE4B-210ENST00000488228 IZUMO1Q8IYV9 350 aa9□□□□□ -0.97
UBE4B-210ENST00000488228 OR1L1Q8NH94 360 aa9□□□□□ -0.97
UBE4B-210ENST00000488228 LEAP2Q969E1 77 aa9□□□□□ -0.97
UBE4B-210ENST00000488228 CLEC7AQ9BXN2 247 aa9□□□□□ -0.97
UBE4B-210ENST00000488228 RBM38Q9H0Z9 239 aaKnown RBP9□□□□□ -0.97
UBE4B-210ENST00000488228 HEXA-AS1Q9H8Q6 139 aa9□□□□□ -0.97
UBE4B-210ENST00000488228 C12orf4Q9NQ89 552 aa9□□□□□ -0.97
UBE4B-210ENST00000488228 ABRACLQ9P1F3 81 aa9□□□□□ -0.97
UBE4B-210ENST00000488228 ZNRD1Q9P1U0 126 aa9□□□□□ -0.97
UBE4B-210ENST00000488228 ELF5Q9UKW6 265 aaPredicted RBP9□□□□□ -0.97
UBE4B-210ENST00000488228 HSF4Q9ULV5 492 aa9□□□□□ -0.97
UBE4B-210ENST00000488228 CEPT1Q9Y6K0 416 aa9□□□□□ -0.97
UBE4B-210ENST00000488228 TMEM235A6NFC5 223 aa8.99□□□□□ -0.97
UBE4B-210ENST00000488228 CCDC160A6NGH7 325 aa8.99□□□□□ -0.97
UBE4B-210ENST00000488228 NPIPB11E5RHQ5 1161 aa8.99□□□□□ -0.97
UBE4B-210ENST00000488228 HBZP02008 142 aa8.99□□□□□ -0.97
UBE4B-210ENST00000488228 ARG1P05089 322 aa8.99□□□□□ -0.97
UBE4B-210ENST00000488228 EIF4EP06730 217 aaKnown RBP8.99□□□□□ -0.97
UBE4B-210ENST00000488228 FPR2P25090 351 aa8.99□□□□□ -0.97
UBE4B-210ENST00000488228 GNG10P50151 68 aa8.99□□□□□ -0.97
UBE4B-210ENST00000488228 RIPPLY3P57055 190 aa8.99□□□□□ -0.97
UBE4B-210ENST00000488228 DYNC1I2Q13409 638 aaKnown RBP8.99□□□□□ -0.97
UBE4B-210ENST00000488228 FAM189A2Q15884 450 aa8.99□□□□□ -0.97
UBE4B-210ENST00000488228 DEFB112Q30KQ8 113 aa8.99□□□□□ -0.97
UBE4B-210ENST00000488228 UBE2NLQ5JXB2 153 aa8.99□□□□□ -0.97
UBE4B-210ENST00000488228 MOB1BQ7L9L4 216 aa8.99□□□□□ -0.97
UBE4B-210ENST00000488228 DTX3Q8N9I9 347 aa8.99□□□□□ -0.97
UBE4B-210ENST00000488228 ZNF565Q8N9K5 539 aa8.99□□□□□ -0.97
UBE4B-210ENST00000488228 OR13D1Q8NGV5 346 aa8.99□□□□□ -0.97
UBE4B-210ENST00000488228 MAFIPQ8WZ33 124 aa8.99□□□□□ -0.97
UBE4B-210ENST00000488228 ARL11Q969Q4 196 aa8.99□□□□□ -0.97
UBE4B-210ENST00000488228 CMSS1Q9BQ75 279 aaKnown RBP8.99□□□□□ -0.97
UBE4B-210ENST00000488228 BCL7BQ9BQE9 202 aa8.99□□□□□ -0.97
UBE4B-210ENST00000488228 LINC00574Q9H8X3 128 aa8.99□□□□□ -0.97
UBE4B-210ENST00000488228 TAF9BQ9HBM6 251 aa8.99□□□□□ -0.97
UBE4B-210ENST00000488228 MBNL3Q9NUK0 354 aaKnown RBP8.99□□□□□ -0.97
UBE4B-210ENST00000488228 IDI2-AS1Q9NZ38 188 aa8.99□□□□□ -0.97
UBE4B-210ENST00000488228 COMMD3Q9UBI1 195 aa8.99□□□□□ -0.97
UBE4B-210ENST00000488228 SPATA2Q9UM82 520 aa8.99□□□□□ -0.97
UBE4B-210ENST00000488228 A0A1W2PPE3 182 aa8.98□□□□□ -0.97
UBE4B-210ENST00000488228 SDCBPO00560 298 aaPredicted RBP8.98□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms