RNA–Protein interactions for RNA: ENST00000487709.1

HMGB1P36-201, Transcript of high mobility group box 1 pseudogene 36, humanhuman

BASIC

Gene HMGB1P36, Length 576 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P36-201ENST00000487709 TCF24Q7RTU0 167 aa1.82□□□□□ -2.12
HMGB1P36-201ENST00000487709 SPICQ8N5J4 248 aa1.82□□□□□ -2.12
HMGB1P36-201ENST00000487709 DTD1Q8TEA8 209 aa1.82□□□□□ -2.12
HMGB1P36-201ENST00000487709 ASCL3Q9NQ33 180 aa1.82□□□□□ -2.12
HMGB1P36-201ENST00000487709 CARHSP1Q9Y2V2 147 aaKnown RBP1.82□□□□□ -2.12
HMGB1P36-201ENST00000487709 USH1CQ9Y6N9 552 aa1.82□□□□□ -2.12
HMGB1P36-201ENST00000487709 SIGLEC1Q9BZZ2 1709 aa1.82□□□□□ -2.12
HMGB1P36-201ENST00000487709 CACNA1DQ01668 2161 aa1.82□□□□□ -2.12
HMGB1P36-201ENST00000487709 SSH2Q76I76 1423 aa1.82□□□□□ -2.12
HMGB1P36-201ENST00000487709 TRAV8-3A0A0A6YYJ7 113 aa1.81□□□□□ -2.12
HMGB1P36-201ENST00000487709 TMEM210A6NLX4 147 aa1.81□□□□□ -2.12
HMGB1P36-201ENST00000487709 ZNF878C9JN71 531 aa1.81□□□□□ -2.12
HMGB1P36-201ENST00000487709 GOLGA8KD6RF30 607 aa1.81□□□□□ -2.12
HMGB1P36-201ENST00000487709 E7EQL1 145 aa1.81□□□□□ -2.12
HMGB1P36-201ENST00000487709 GOLGA6L19H0YKK7 550 aa1.81□□□□□ -2.12
HMGB1P36-201ENST00000487709 GOLGA8MH3BSY2 632 aa1.81□□□□□ -2.12
HMGB1P36-201ENST00000487709 J3QRE1 110 aa1.81□□□□□ -2.12
HMGB1P36-201ENST00000487709 FABP7O15540 132 aa1.81□□□□□ -2.12
HMGB1P36-201ENST00000487709 PSMG1O95456 288 aa1.81□□□□□ -2.12
HMGB1P36-201ENST00000487709 AKR1C4P17516 323 aa1.81□□□□□ -2.12
HMGB1P36-201ENST00000487709 PVALBP20472 110 aaPredicted RBP1.81□□□□□ -2.12
HMGB1P36-201ENST00000487709 GTF2H1P32780 548 aa1.81□□□□□ -2.12
HMGB1P36-201ENST00000487709 S100A5P33763 92 aa1.81□□□□□ -2.12
HMGB1P36-201ENST00000487709 RHOAP61586 193 aa1.81□□□□□ -2.12
HMGB1P36-201ENST00000487709 HBG1P69891 147 aa1.81□□□□□ -2.12
HMGB1P36-201ENST00000487709 HBG2P69892 147 aa1.81□□□□□ -2.12
HMGB1P36-201ENST00000487709 RAB31Q13636 194 aa1.81□□□□□ -2.12
HMGB1P36-201ENST00000487709 SLC9A3R2Q15599 337 aa1.81□□□□□ -2.12
HMGB1P36-201ENST00000487709 TMEM25Q86YD3 366 aa1.81□□□□□ -2.12
HMGB1P36-201ENST00000487709 KRT222Q8N1A0 295 aa1.81□□□□□ -2.12
HMGB1P36-201ENST00000487709 LFNGQ8NES3 379 aa1.81□□□□□ -2.12
HMGB1P36-201ENST00000487709 OR8J2Q8NGG1 315 aa1.81□□□□□ -2.12
HMGB1P36-201ENST00000487709 RNASEH2CQ8TDP1 164 aaKnown RBP1.81□□□□□ -2.12
HMGB1P36-201ENST00000487709 DNAJB3Q8WWF6 145 aa1.81□□□□□ -2.12
HMGB1P36-201ENST00000487709 APOBEC3DQ96AK3 386 aaPredicted RBP1.81□□□□□ -2.12
HMGB1P36-201ENST00000487709 PPP1R14BQ96C90 147 aa1.81□□□□□ -2.12
HMGB1P36-201ENST00000487709 CMTM5Q96DZ9 223 aa1.81□□□□□ -2.12
HMGB1P36-201ENST00000487709 SLC25A44Q96H78 314 aaPredicted RBP1.81□□□□□ -2.12
HMGB1P36-201ENST00000487709 FMC1Q96HJ9 113 aa1.81□□□□□ -2.12
HMGB1P36-201ENST00000487709 BIRC8Q96P09 236 aa1.81□□□□□ -2.12
HMGB1P36-201ENST00000487709 OLFM3Q96PB7 478 aa1.81□□□□□ -2.12
HMGB1P36-201ENST00000487709 TRIB3Q96RU7 358 aa1.81□□□□□ -2.12
HMGB1P36-201ENST00000487709 SUCNR1Q9BXA5 334 aa1.81□□□□□ -2.12
HMGB1P36-201ENST00000487709 POTEKPQ9BYX7 375 aa1.81□□□□□ -2.12
HMGB1P36-201ENST00000487709 SNX24Q9Y343 169 aa1.81□□□□□ -2.12
HMGB1P36-201ENST00000487709 A0A1B0GX12 115 aa1.8□□□□□ -2.12
HMGB1P36-201ENST00000487709 GGTLC3B5MD39 225 aa1.8□□□□□ -2.12
HMGB1P36-201ENST00000487709 C9J4A7 227 aa1.8□□□□□ -2.12
HMGB1P36-201ENST00000487709 H3BP45 60 aa1.8□□□□□ -2.12
HMGB1P36-201ENST00000487709 SLC16A4O15374 487 aa1.8□□□□□ -2.12
HMGB1P36-201ENST00000487709 ADAP1O75689 374 aa1.8□□□□□ -2.12
HMGB1P36-201ENST00000487709 CDS2O95674 445 aa1.8□□□□□ -2.12
HMGB1P36-201ENST00000487709 APOEP02649 317 aa1.8□□□□□ -2.12
HMGB1P36-201ENST00000487709 ORM1P02763 201 aa1.8□□□□□ -2.12
HMGB1P36-201ENST00000487709 LGALS3P17931 250 aaKnown RBP1.8□□□□□ -2.12
HMGB1P36-201ENST00000487709 F8A1P23610 371 aa1.8□□□□□ -2.12
HMGB1P36-201ENST00000487709 RPL14P50914 215 aaKnown RBP1.8□□□□□ -2.12
HMGB1P36-201ENST00000487709 CEBPGP53567 150 aa1.8□□□□□ -2.12
HMGB1P36-201ENST00000487709 RAB8AP61006 207 aa1.8□□□□□ -2.12
HMGB1P36-201ENST00000487709 BASP1P80723 227 aaKnown RBP1.8□□□□□ -2.12
HMGB1P36-201ENST00000487709 CD164Q04900 197 aa1.8□□□□□ -2.12
HMGB1P36-201ENST00000487709 FADDQ13158 208 aa1.8□□□□□ -2.12
HMGB1P36-201ENST00000487709 GNA13Q14344 377 aa1.8□□□□□ -2.12
HMGB1P36-201ENST00000487709 SLC36A2Q495M3 483 aa1.8□□□□□ -2.12
HMGB1P36-201ENST00000487709 COQ5Q5HYK3 327 aa1.8□□□□□ -2.12
HMGB1P36-201ENST00000487709 OR10J3Q5JRS4 329 aa1.8□□□□□ -2.12
HMGB1P36-201ENST00000487709 LAMTOR1Q6IAA8 161 aa1.8□□□□□ -2.12
HMGB1P36-201ENST00000487709 GLYATQ6IB77 296 aa1.8□□□□□ -2.12
HMGB1P36-201ENST00000487709 SMARCD3Q6STE5 483 aa1.8□□□□□ -2.12
HMGB1P36-201ENST00000487709 Q6ZT83 130 aa1.8□□□□□ -2.12
HMGB1P36-201ENST00000487709 OLIG3Q7RTU3 272 aa1.8□□□□□ -2.12
HMGB1P36-201ENST00000487709 FAM19A1Q7Z5A9 133 aa1.8□□□□□ -2.12
HMGB1P36-201ENST00000487709 NIT1Q86X76 327 aa1.8□□□□□ -2.12
HMGB1P36-201ENST00000487709 ZFP82Q8N141 532 aa1.8□□□□□ -2.12
HMGB1P36-201ENST00000487709 TMEM251Q8N6I4 163 aa1.8□□□□□ -2.12
HMGB1P36-201ENST00000487709 FER1L6-AS1Q8NA97 138 aa1.8□□□□□ -2.12
HMGB1P36-201ENST00000487709 CCDC112Q8NEF3 446 aa1.8□□□□□ -2.12
HMGB1P36-201ENST00000487709 OR2K2Q8NGT1 345 aa1.8□□□□□ -2.12
HMGB1P36-201ENST00000487709 DYNC2LI1Q8TCX1 351 aa1.8□□□□□ -2.12
HMGB1P36-201ENST00000487709 OR5P2Q8WZ92 322 aa1.8□□□□□ -2.12
HMGB1P36-201ENST00000487709 CCL17Q92583 94 aa1.8□□□□□ -2.12
HMGB1P36-201ENST00000487709 CLDN23Q96B33 292 aa1.8□□□□□ -2.12
HMGB1P36-201ENST00000487709 HBEGFQ99075 208 aa1.8□□□□□ -2.12
HMGB1P36-201ENST00000487709 SPANXB1Q9NS25 103 aaPredicted RBP1.8□□□□□ -2.12
HMGB1P36-201ENST00000487709 PLEKHJ1Q9NW61 149 aa1.8□□□□□ -2.12
HMGB1P36-201ENST00000487709 FBXL3Q9UKT7 428 aa1.8□□□□□ -2.12
HMGB1P36-201ENST00000487709 KIAA0232Q92628 1395 aa1.8□□□□□ -2.12
HMGB1P36-201ENST00000487709 BAZ1BQ9UIG0 1483 aaKnown RBP1.8□□□□□ -2.12
HMGB1P36-201ENST00000487709 TMEM131Q92545 1883 aa1.8□□□□□ -2.12
HMGB1P36-201ENST00000487709 IGKV1OR2-108A0A075B7D4 117 aa1.79□□□□□ -2.12
HMGB1P36-201ENST00000487709 IGHV1-45A0A0A0MS14 117 aa1.79□□□□□ -2.12
HMGB1P36-201ENST00000487709 TRAV8-2A0A0B4J237 113 aa1.79□□□□□ -2.12
HMGB1P36-201ENST00000487709 A6NED7 52 aa1.79□□□□□ -2.12
HMGB1P36-201ENST00000487709 FTCDNL1E5RQL4 147 aa1.79□□□□□ -2.12
HMGB1P36-201ENST00000487709 ISLRO14498 428 aa1.79□□□□□ -2.12
HMGB1P36-201ENST00000487709 CDIPTO14735 213 aa1.79□□□□□ -2.12
HMGB1P36-201ENST00000487709 ATP8B1O43520 1251 aa1.79□□□□□ -2.12
HMGB1P36-201ENST00000487709 CYTH3O43739 400 aa1.79□□□□□ -2.12
HMGB1P36-201ENST00000487709 HPGDSO60760 199 aa1.79□□□□□ -2.12
HMGB1P36-201ENST00000487709 SHOX2O60902 331 aaPredicted RBP1.79□□□□□ -2.12
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms