RNA–Protein interactions for RNA: ENST00000486704.1

HDAC8-218, Transcript of histone deacetylase 8, humanhuman

TSL 2

Gene HDAC8, Length 330 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC8-218ENST00000486704 EFNB2P52799 333 aa12.84□□□□□ -0.35
HDAC8-218ENST00000486704 PRRX1P54821 245 aa12.84□□□□□ -0.35
HDAC8-218ENST00000486704 KRTAP10-3P60369 221 aa12.84□□□□□ -0.35
HDAC8-218ENST00000486704 GABARAPL2P60520 117 aa12.84□□□□□ -0.35
HDAC8-218ENST00000486704 SRSF4Q08170 494 aaKnown RBP12.84□□□□□ -0.35
HDAC8-218ENST00000486704 RBM39Q14498 530 aaKnown RBP12.84□□□□□ -0.35
HDAC8-218ENST00000486704 GLT8D1Q68CQ7 371 aa12.84□□□□□ -0.35
HDAC8-218ENST00000486704 CCBE1Q6UXH8 406 aaPredicted RBP12.84□□□□□ -0.35
HDAC8-218ENST00000486704 GAPTQ8N292 157 aa12.84□□□□□ -0.35
HDAC8-218ENST00000486704 MGLLQ99685 303 aa12.84□□□□□ -0.35
HDAC8-218ENST00000486704 SELENOIQ9C0D9 397 aa12.84□□□□□ -0.35
HDAC8-218ENST00000486704 MMP28Q9H239 520 aa12.84□□□□□ -0.35
HDAC8-218ENST00000486704 AMMECR1Q9Y4X0 333 aaPredicted RBP12.84□□□□□ -0.35
HDAC8-218ENST00000486704 TET2Q6N021 2002 aaPredicted RBP12.83□□□□□ -0.36
HDAC8-218ENST00000486704 MCRIP1C9JLW8 97 aa12.83□□□□□ -0.36
HDAC8-218ENST00000486704 LY6LH3BQJ8 138 aa12.83□□□□□ -0.36
HDAC8-218ENST00000486704 ORC5O43913 435 aa12.83□□□□□ -0.36
HDAC8-218ENST00000486704 CA11O75493 328 aa12.83□□□□□ -0.36
HDAC8-218ENST00000486704 CRTAPO75718 401 aaPredicted RBP12.83□□□□□ -0.36
HDAC8-218ENST00000486704 NFYBP25208 207 aa12.83□□□□□ -0.36
HDAC8-218ENST00000486704 RAB13P51153 203 aa12.83□□□□□ -0.36
HDAC8-218ENST00000486704 RPS25P62851 125 aaKnown RBP12.83□□□□□ -0.36
HDAC8-218ENST00000486704 UTF1Q5T230 341 aa12.83□□□□□ -0.36
HDAC8-218ENST00000486704 TPTE2P1Q5T6R2 138 aa12.83□□□□□ -0.36
HDAC8-218ENST00000486704 RAB12Q6IQ22 244 aa12.83□□□□□ -0.36
HDAC8-218ENST00000486704 TMEM91Q6ZNR0 172 aa12.83□□□□□ -0.36
HDAC8-218ENST00000486704 ZNF367Q7RTV3 350 aa12.83□□□□□ -0.36
HDAC8-218ENST00000486704 Q8N2B8 174 aa12.83□□□□□ -0.36
HDAC8-218ENST00000486704 OR2T6Q8NHC8 308 aa12.83□□□□□ -0.36
HDAC8-218ENST00000486704 NEK7Q8TDX7 302 aa12.83□□□□□ -0.36
HDAC8-218ENST00000486704 BANF2Q9H503 90 aa12.83□□□□□ -0.36
HDAC8-218ENST00000486704 TRRAPQ9Y4A5 3859 aa12.83□□□□□ -0.36
HDAC8-218ENST00000486704 C15orf65H3BRN8 121 aa12.82□□□□□ -0.36
HDAC8-218ENST00000486704 J3QR06 171 aa12.82□□□□□ -0.36
HDAC8-218ENST00000486704 AIPO00170 330 aa12.82□□□□□ -0.36
HDAC8-218ENST00000486704 SLC22A1O15245 554 aa12.82□□□□□ -0.36
HDAC8-218ENST00000486704 MRPS14O60783 128 aaKnown RBP12.82□□□□□ -0.36
HDAC8-218ENST00000486704 ARL6IP5O75915 188 aa12.82□□□□□ -0.36
HDAC8-218ENST00000486704 MT-ND4P03905 459 aa12.82□□□□□ -0.36
HDAC8-218ENST00000486704 JUNBP17275 347 aaPredicted RBP12.82□□□□□ -0.36
HDAC8-218ENST00000486704 FUT3P21217 361 aa12.82□□□□□ -0.36
HDAC8-218ENST00000486704 BRS3P32247 399 aa12.82□□□□□ -0.36
HDAC8-218ENST00000486704 MAP2K4P45985 399 aa12.82□□□□□ -0.36
HDAC8-218ENST00000486704 TMEM30BQ3MIR4 351 aa12.82□□□□□ -0.36
HDAC8-218ENST00000486704 SIGIRRQ6IA17 410 aa12.82□□□□□ -0.36
HDAC8-218ENST00000486704 CCDC144NLQ6NUI1 221 aa12.82□□□□□ -0.36
HDAC8-218ENST00000486704 C16orf82Q7Z2V1 217 aa12.82□□□□□ -0.36
HDAC8-218ENST00000486704 TMEM219Q86XT9 240 aa12.82□□□□□ -0.36
HDAC8-218ENST00000486704 OR52M1Q8NGK5 317 aa12.82□□□□□ -0.36
HDAC8-218ENST00000486704 OR6M1Q8NGM8 313 aa12.82□□□□□ -0.36
HDAC8-218ENST00000486704 TMEM203Q969S6 136 aa12.82□□□□□ -0.36
HDAC8-218ENST00000486704 Q9H521 79 aa12.82□□□□□ -0.36
HDAC8-218ENST00000486704 ZNF702PQ9H963 129 aa12.82□□□□□ -0.36
HDAC8-218ENST00000486704 ACOT13Q9NPJ3 140 aa12.82□□□□□ -0.36
HDAC8-218ENST00000486704 TRAV39A0A0B4J263 110 aa12.81□□□□□ -0.36
HDAC8-218ENST00000486704 TIMM23O14925 209 aa12.81□□□□□ -0.36
HDAC8-218ENST00000486704 PDCD6O75340 191 aa12.81□□□□□ -0.36
HDAC8-218ENST00000486704 VSIG8P0DPA2 414 aa12.81□□□□□ -0.36
HDAC8-218ENST00000486704 HTR2CP28335 458 aa12.81□□□□□ -0.36
HDAC8-218ENST00000486704 TRAT1Q6PIZ9 186 aa12.81□□□□□ -0.36
HDAC8-218ENST00000486704 C8orf31Q8N9H6 132 aa12.81□□□□□ -0.36
HDAC8-218ENST00000486704 RFESDQ8TAC1 157 aa12.81□□□□□ -0.36
HDAC8-218ENST00000486704 FAM46BQ96A09 425 aa12.81□□□□□ -0.36
HDAC8-218ENST00000486704 RAB9BQ9NP90 201 aa12.81□□□□□ -0.36
HDAC8-218ENST00000486704 ETAA1Q9NY74 926 aa12.81□□□□□ -0.36
HDAC8-218ENST00000486704 PSG11Q9UQ72 335 aa12.81□□□□□ -0.36
HDAC8-218ENST00000486704 PEX16Q9Y5Y5 336 aa12.81□□□□□ -0.36
HDAC8-218ENST00000486704 VWFP04275 2813 aa12.8□□□□□ -0.36
HDAC8-218ENST00000486704 DENRO43583 198 aaKnown RBP12.8□□□□□ -0.36
HDAC8-218ENST00000486704 BPNT1O95861 308 aa12.8□□□□□ -0.36
HDAC8-218ENST00000486704 MPIG6BO95866 241 aa12.8□□□□□ -0.36
HDAC8-218ENST00000486704 MNDAP41218 407 aa12.8□□□□□ -0.36
HDAC8-218ENST00000486704 RPS27AP62979 156 aaKnown RBP12.8□□□□□ -0.36
HDAC8-218ENST00000486704 FABP5Q01469 135 aa12.8□□□□□ -0.36
HDAC8-218ENST00000486704 Q3ZCU0 254 aa12.8□□□□□ -0.36
HDAC8-218ENST00000486704 C6orf183Q5T699 404 aa12.8□□□□□ -0.36
HDAC8-218ENST00000486704 ZNF554Q86TJ5 538 aa12.8□□□□□ -0.36
HDAC8-218ENST00000486704 KCNG3Q8TAE7 436 aa12.8□□□□□ -0.36
HDAC8-218ENST00000486704 LEAP2Q969E1 77 aa12.8□□□□□ -0.36
HDAC8-218ENST00000486704 TOMM40LQ969M1 308 aa12.8□□□□□ -0.36
HDAC8-218ENST00000486704 ARL11Q969Q4 196 aa12.8□□□□□ -0.36
HDAC8-218ENST00000486704 TM2D1Q9BX74 207 aa12.8□□□□□ -0.36
HDAC8-218ENST00000486704 TMEM59Q9BXS4 323 aa12.8□□□□□ -0.36
HDAC8-218ENST00000486704 LIN7BQ9HAP6 207 aa12.8□□□□□ -0.36
HDAC8-218ENST00000486704 TMEM14DPA8MWL7 114 aa12.79□□□□□ -0.36
HDAC8-218ENST00000486704 M0QZ24 198 aa12.79□□□□□ -0.36
HDAC8-218ENST00000486704 SLC17A2O00624 439 aa12.79□□□□□ -0.36
HDAC8-218ENST00000486704 CHATP28329 748 aa12.79□□□□□ -0.36
HDAC8-218ENST00000486704 LOXL3P58215 753 aa12.79□□□□□ -0.36
HDAC8-218ENST00000486704 QRFPP83859 136 aa12.79□□□□□ -0.36
HDAC8-218ENST00000486704 UNC119Q13432 240 aa12.79□□□□□ -0.36
HDAC8-218ENST00000486704 MADCAM1Q13477 382 aa12.79□□□□□ -0.36
HDAC8-218ENST00000486704 SSX1Q16384 188 aa12.79□□□□□ -0.36
HDAC8-218ENST00000486704 LTC4SQ16873 150 aa12.79□□□□□ -0.36
HDAC8-218ENST00000486704 SYT6Q5T7P8 510 aaPredicted RBP12.79□□□□□ -0.36
HDAC8-218ENST00000486704 TREML4Q6UXN2 200 aa12.79□□□□□ -0.36
HDAC8-218ENST00000486704 SVOPQ8N4V2 548 aa12.79□□□□□ -0.36
HDAC8-218ENST00000486704 LINC00311Q8N616 119 aa12.79□□□□□ -0.36
HDAC8-218ENST00000486704 RPEQ96AT9 228 aa12.79□□□□□ -0.36
HDAC8-218ENST00000486704 AKR1E2Q96JD6 320 aa12.79□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms