RNA–Protein interactions for RNA: ENST00000485985.1

LMBR1-217, Transcript of limb development membrane protein 1, humanhuman

TSL 2

Gene LMBR1, Length 644 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMBR1-217ENST00000485985 GGHQ92820 318 aa16.56■□□□□ 0.24
LMBR1-217ENST00000485985 OR14A2Q96R54 314 aa16.56■□□□□ 0.24
LMBR1-217ENST00000485985 PCDHB16Q9NRJ7 776 aa16.56■□□□□ 0.24
LMBR1-217ENST00000485985 ZKSCAN7Q9P0L1 754 aaPredicted RBP16.56■□□□□ 0.24
LMBR1-217ENST00000485985 TMEM30CPA0ZSE6 113 aa16.55■□□□□ 0.24
LMBR1-217ENST00000485985 C15orf65H3BRN8 121 aa16.55■□□□□ 0.24
LMBR1-217ENST00000485985 K7EIL1 84 aa16.55■□□□□ 0.24
LMBR1-217ENST00000485985 M0QZK8 103 aa16.55■□□□□ 0.24
LMBR1-217ENST00000485985 GPX5O75715 221 aa16.55■□□□□ 0.24
LMBR1-217ENST00000485985 FAM106CPP0CH98 169 aa16.55■□□□□ 0.24
LMBR1-217ENST00000485985 MPV17LQ2QL34 196 aa16.55■□□□□ 0.24
LMBR1-217ENST00000485985 SLC22A6Q4U2R8 563 aa16.55■□□□□ 0.24
LMBR1-217ENST00000485985 YIF1BQ5BJH7 314 aa16.55■□□□□ 0.24
LMBR1-217ENST00000485985 C9orf152Q5JTZ5 239 aa16.55■□□□□ 0.24
LMBR1-217ENST00000485985 FAM53AQ6NSI3 398 aaPredicted RBP16.55■□□□□ 0.24
LMBR1-217ENST00000485985 THNSL2Q86YJ6 484 aa16.55■□□□□ 0.24
LMBR1-217ENST00000485985 PACRGLQ8N7B6 248 aa16.55■□□□□ 0.24
LMBR1-217ENST00000485985 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP16.55■□□□□ 0.248e-7■■■■□ 25.9
LMBR1-217ENST00000485985 TRBV5-7A0A0A0MS05 114 aa16.54■□□□□ 0.24
LMBR1-217ENST00000485985 PNMA8CA0A1B0GUJ8 204 aa16.54■□□□□ 0.24
LMBR1-217ENST00000485985 TCRBV4S1A1TA0A5B7 111 aa16.54■□□□□ 0.24
LMBR1-217ENST00000485985 ST3GAL4Q11206 333 aa16.54■□□□□ 0.24
LMBR1-217ENST00000485985 RCN1Q15293 331 aa16.54■□□□□ 0.24
LMBR1-217ENST00000485985 ATAD3CQ5T2N8 411 aa16.54■□□□□ 0.24
LMBR1-217ENST00000485985 DHRSXQ8N5I4 330 aa16.54■□□□□ 0.24
LMBR1-217ENST00000485985 C5orf56Q8N8D9 126 aa16.54■□□□□ 0.24
LMBR1-217ENST00000485985 OR4X2Q8NGF9 303 aa16.54■□□□□ 0.24
LMBR1-217ENST00000485985 S100A13Q99584 98 aa16.54■□□□□ 0.24
LMBR1-217ENST00000485985 PAK1IP1Q9NWT1 392 aaPredicted RBP16.54■□□□□ 0.24
LMBR1-217ENST00000485985 TSSC4Q9Y5U2 329 aaPredicted RBP16.54■□□□□ 0.24
LMBR1-217ENST00000485985 COL7A1Q02388 2944 aa16.53■□□□□ 0.24
LMBR1-217ENST00000485985 KMT2CQ8NEZ4 4911 aaKnown RBP16.53■□□□□ 0.24
LMBR1-217ENST00000485985 A0A1W2PPK0 400 aa16.53■□□□□ 0.24
LMBR1-217ENST00000485985 HSD17B6O14756 317 aa16.53■□□□□ 0.24
LMBR1-217ENST00000485985 PF4V1P10720 104 aa16.53■□□□□ 0.24
LMBR1-217ENST00000485985 RAB7AP51149 207 aa16.53■□□□□ 0.24
LMBR1-217ENST00000485985 HES1Q14469 280 aa16.53■□□□□ 0.24
LMBR1-217ENST00000485985 SLC16A12Q6ZSM3 486 aa16.53■□□□□ 0.24
LMBR1-217ENST00000485985 OR8H3Q8N146 312 aa16.53■□□□□ 0.24
LMBR1-217ENST00000485985 OR10X1Q8NGY0 326 aa16.53■□□□□ 0.24
LMBR1-217ENST00000485985 CCDC107Q8WV48 283 aa16.53■□□□□ 0.24
LMBR1-217ENST00000485985 MUL1Q969V5 352 aa16.53■□□□□ 0.24
LMBR1-217ENST00000485985 CYYR1Q96J86 154 aa16.53■□□□□ 0.24
LMBR1-217ENST00000485985 C8orf4Q9NR00 106 aa16.53■□□□□ 0.24
LMBR1-217ENST00000485985 RCC2Q9P258 522 aaKnown RBP16.53■□□□□ 0.24
LMBR1-217ENST00000485985 CKLFQ9UBR5 152 aa16.53■□□□□ 0.24
LMBR1-217ENST00000485985 ZNF780AO75290 641 aaPredicted RBP16.52■□□□□ 0.24
LMBR1-217ENST00000485985 IGKV1D-33P01593 117 aa16.52■□□□□ 0.24
LMBR1-217ENST00000485985 IGKV1-33P01594 117 aa16.52■□□□□ 0.24
LMBR1-217ENST00000485985 GTF2F2P13984 249 aa16.52■□□□□ 0.24
LMBR1-217ENST00000485985 TMEM11P17152 192 aa16.52■□□□□ 0.24
LMBR1-217ENST00000485985 REG1BP48304 166 aa16.52■□□□□ 0.24
LMBR1-217ENST00000485985 MED21Q13503 144 aa16.52■□□□□ 0.24
LMBR1-217ENST00000485985 KHDC1LQ5JSQ8 128 aa16.52■□□□□ 0.24
LMBR1-217ENST00000485985 ZNF497Q6ZNH5 498 aa16.52■□□□□ 0.24
LMBR1-217ENST00000485985 NEK7Q8TDX7 302 aa16.52■□□□□ 0.24
LMBR1-217ENST00000485985 ARL11Q969Q4 196 aa16.52■□□□□ 0.24
LMBR1-217ENST00000485985 CHCHD3Q9NX63 227 aaKnown RBP16.52■□□□□ 0.24
LMBR1-217ENST00000485985 MRPS28Q9Y2Q9 187 aaKnown RBP16.52■□□□□ 0.24
LMBR1-217ENST00000485985 IGHV3-43A0A0B4J1X8 118 aa16.51■□□□□ 0.23
LMBR1-217ENST00000485985 AIPO00170 330 aa16.51■□□□□ 0.23
LMBR1-217ENST00000485985 SDCBPO00560 298 aaPredicted RBP16.51■□□□□ 0.23
LMBR1-217ENST00000485985 IGHV3-43DP0DP04 118 aa16.51■□□□□ 0.23
LMBR1-217ENST00000485985 GZMHP20718 246 aa16.51■□□□□ 0.23
LMBR1-217ENST00000485985 CAPGP40121 348 aa16.51■□□□□ 0.23
LMBR1-217ENST00000485985 SLC35A2P78381 396 aa16.51■□□□□ 0.23
LMBR1-217ENST00000485985 ZNF816Q0VGE8 651 aaPredicted RBP16.51■□□□□ 0.23
LMBR1-217ENST00000485985 HNF4GQ14541 408 aa16.51■□□□□ 0.23
LMBR1-217ENST00000485985 C11orf87Q6NUJ2 197 aa16.51■□□□□ 0.23
LMBR1-217ENST00000485985 AHSA2Q719I0 299 aa16.51■□□□□ 0.23
LMBR1-217ENST00000485985 LYPD6Q86Y78 171 aa16.51■□□□□ 0.23
LMBR1-217ENST00000485985 JAGN1Q8N5M9 183 aa16.51■□□□□ 0.23
LMBR1-217ENST00000485985 FBLIM1Q8WUP2 373 aa16.51■□□□□ 0.23
LMBR1-217ENST00000485985 NOL4LQ96MY1 436 aaPredicted RBP16.51■□□□□ 0.23
LMBR1-217ENST00000485985 DERL3Q96Q80 235 aa16.51■□□□□ 0.23
LMBR1-217ENST00000485985 GFOD1Q9NXC2 390 aa16.51■□□□□ 0.23
LMBR1-217ENST00000485985 CNOT2Q9NZN8 540 aaKnown RBP16.51■□□□□ 0.23
LMBR1-217ENST00000485985 TENM3Q9P273 2699 aa16.51■□□□□ 0.23
LMBR1-217ENST00000485985 IGHV1-3A0A0C4DH29 117 aa16.5■□□□□ 0.23
LMBR1-217ENST00000485985 PSMB11A5LHX3 300 aa16.5■□□□□ 0.23
LMBR1-217ENST00000485985 EFCAB10A6NFE3 127 aa16.5■□□□□ 0.23
LMBR1-217ENST00000485985 ORC5O43913 435 aa16.5■□□□□ 0.23
LMBR1-217ENST00000485985 PF4P02776 101 aa16.5■□□□□ 0.23
LMBR1-217ENST00000485985 MT-ND4P03905 459 aa16.5■□□□□ 0.23
LMBR1-217ENST00000485985 DEFB121Q5J5C9 76 aa16.5■□□□□ 0.23
LMBR1-217ENST00000485985 GLIPR1L1Q6UWM5 242 aa16.5■□□□□ 0.23
LMBR1-217ENST00000485985 C8orf59Q8N0T1 100 aaPredicted RBP16.5■□□□□ 0.23
LMBR1-217ENST00000485985 OR52M1Q8NGK5 317 aa16.5■□□□□ 0.23
LMBR1-217ENST00000485985 PSORS1C1Q9UIG5 152 aa16.5■□□□□ 0.23
LMBR1-217ENST00000485985 IGHV3-72A0A0B4J1Y9 119 aa16.49■□□□□ 0.23
LMBR1-217ENST00000485985 CCRL2O00421 344 aa16.49■□□□□ 0.23
LMBR1-217ENST00000485985 SLC31A2O15432 143 aa16.49■□□□□ 0.23
LMBR1-217ENST00000485985 FGF16O43320 207 aa16.49■□□□□ 0.23
LMBR1-217ENST00000485985 MAS1P04201 325 aa16.49■□□□□ 0.23
LMBR1-217ENST00000485985 TAS2R43P59537 309 aa16.49■□□□□ 0.23
LMBR1-217ENST00000485985 KRTAP10-11P60412 298 aa16.49■□□□□ 0.23
LMBR1-217ENST00000485985 GPR176Q14439 515 aa16.49■□□□□ 0.23
LMBR1-217ENST00000485985 OGFRL1Q5TC84 451 aaPredicted RBP16.49■□□□□ 0.23
LMBR1-217ENST00000485985 AWAT2Q6E213 333 aa16.49■□□□□ 0.23
LMBR1-217ENST00000485985 ZNF329Q86UD4 541 aa16.49■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms