RNA–Protein interactions for RNA: ENST00000485867.5

SMC4-217, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 3

Gene SMC4, Length 629 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-217ENST00000485867 LYNP07948 512 aa4.95□□□□□ -1.62
SMC4-217ENST00000485867 REG1BP48304 166 aa4.95□□□□□ -1.62
SMC4-217ENST00000485867 AESQ08117 197 aa4.95□□□□□ -1.62
SMC4-217ENST00000485867 MFGE8Q08431 387 aaPredicted RBP4.95□□□□□ -1.62
SMC4-217ENST00000485867 ZNF816Q0VGE8 651 aaPredicted RBP4.95□□□□□ -1.62
SMC4-217ENST00000485867 TSPAN31Q12999 210 aa4.95□□□□□ -1.62
SMC4-217ENST00000485867 GALEQ14376 348 aa4.95□□□□□ -1.62
SMC4-217ENST00000485867 MOB3BQ86TA1 216 aa4.95□□□□□ -1.62
SMC4-217ENST00000485867 SLC15A3Q8IY34 581 aa4.95□□□□□ -1.62
SMC4-217ENST00000485867 ENTHD1Q8IYW4 607 aa4.95□□□□□ -1.62
SMC4-217ENST00000485867 TMEM104Q8NE00 496 aa4.95□□□□□ -1.62
SMC4-217ENST00000485867 OR52L1Q8NGH7 329 aa4.95□□□□□ -1.62
SMC4-217ENST00000485867 OR8D4Q8NGM9 314 aa4.95□□□□□ -1.62
SMC4-217ENST00000485867 OTOSQ8NHW6 89 aa4.95□□□□□ -1.62
SMC4-217ENST00000485867 OR51E1Q8TCB6 317 aa4.95□□□□□ -1.62
SMC4-217ENST00000485867 HAVCR2Q8TDQ0 301 aa4.95□□□□□ -1.62
SMC4-217ENST00000485867 EMG1Q92979 244 aaKnown RBP4.95□□□□□ -1.62
SMC4-217ENST00000485867 FLYWCH2Q96CP2 140 aaKnown RBP4.95□□□□□ -1.62
SMC4-217ENST00000485867 TEAD3Q99594 435 aa4.95□□□□□ -1.62
SMC4-217ENST00000485867 CADM1Q9BY67 442 aaKnown RBP4.95□□□□□ -1.62
SMC4-217ENST00000485867 FAM206AQ9NX38 181 aa4.95□□□□□ -1.62
SMC4-217ENST00000485867 OR6C3Q9NZP0 311 aa4.95□□□□□ -1.62
SMC4-217ENST00000485867 ZNF107Q9UII5 783 aaPredicted RBP4.95□□□□□ -1.62
SMC4-217ENST00000485867 PSG11Q9UQ72 335 aa4.95□□□□□ -1.62
SMC4-217ENST00000485867 KLHDC2Q9Y2U9 406 aa4.95□□□□□ -1.62
SMC4-217ENST00000485867 IGKV1-27A0A075B6S5 117 aa4.94□□□□□ -1.62
SMC4-217ENST00000485867 TRAV41A0A0B4J266 112 aa4.94□□□□□ -1.62
SMC4-217ENST00000485867 A0A0J9YWU9 116 aa4.94□□□□□ -1.62
SMC4-217ENST00000485867 KBTBD11-OT1A0A1B0GTJ5 212 aa4.94□□□□□ -1.62
SMC4-217ENST00000485867 IZUMO1RA6ND01 250 aa4.94□□□□□ -1.62
SMC4-217ENST00000485867 ACOD1A6NK06 481 aa4.94□□□□□ -1.62
SMC4-217ENST00000485867 SIRPB1O00241 398 aa4.94□□□□□ -1.62
SMC4-217ENST00000485867 MRASO14807 208 aa4.94□□□□□ -1.62
SMC4-217ENST00000485867 ENTPD6O75354 484 aa4.94□□□□□ -1.62
SMC4-217ENST00000485867 TPPPO94811 219 aa4.94□□□□□ -1.62
SMC4-217ENST00000485867 MOSP00540 346 aa4.94□□□□□ -1.62
SMC4-217ENST00000485867 NPPAP01160 153 aa4.94□□□□□ -1.62
SMC4-217ENST00000485867 HSPB1P04792 205 aaKnown RBP4.94□□□□□ -1.62
SMC4-217ENST00000485867 NPSP0C0P6 89 aa4.94□□□□□ -1.62
SMC4-217ENST00000485867 CGB3P0DN86 165 aa4.94□□□□□ -1.62
SMC4-217ENST00000485867 CGB7P0DN87 165 aa4.94□□□□□ -1.62
SMC4-217ENST00000485867 SLC2A2P11168 524 aaPredicted RBP4.94□□□□□ -1.62
SMC4-217ENST00000485867 H2AFXP16104 143 aaPredicted RBP4.94□□□□□ -1.62
SMC4-217ENST00000485867 FASP25445 335 aa4.94□□□□□ -1.62
SMC4-217ENST00000485867 GNG10P50151 68 aa4.94□□□□□ -1.62
SMC4-217ENST00000485867 F2RL1P55085 397 aa4.94□□□□□ -1.62
SMC4-217ENST00000485867 SNU13P55769 128 aaKnown RBP4.94□□□□□ -1.62
SMC4-217ENST00000485867 CD81P60033 236 aa4.94□□□□□ -1.62
SMC4-217ENST00000485867 CDC42P60953 191 aa4.94□□□□□ -1.62
SMC4-217ENST00000485867 ZNF146Q15072 292 aa4.94□□□□□ -1.62
SMC4-217ENST00000485867 LCN12Q6JVE5 192 aa4.94□□□□□ -1.62
SMC4-217ENST00000485867 RPL13AP3Q6NVV1 102 aa4.94□□□□□ -1.62
SMC4-217ENST00000485867 IL34Q6ZMJ4 242 aa4.94□□□□□ -1.62
SMC4-217ENST00000485867 Q6ZWC4 215 aa4.94□□□□□ -1.62
SMC4-217ENST00000485867 SLC25A26Q70HW3 274 aa4.94□□□□□ -1.62
SMC4-217ENST00000485867 MINDY2Q8NBR6 621 aa4.94□□□□□ -1.62
SMC4-217ENST00000485867 OR8H1Q8NGG4 311 aa4.94□□□□□ -1.62
SMC4-217ENST00000485867 GNPDA2Q8TDQ7 276 aa4.94□□□□□ -1.62
SMC4-217ENST00000485867 THEM6Q8WUY1 208 aa4.94□□□□□ -1.62
SMC4-217ENST00000485867 RGP1Q92546 391 aaPredicted RBP4.94□□□□□ -1.62
SMC4-217ENST00000485867 COQ2Q96H96 371 aa4.94□□□□□ -1.62
SMC4-217ENST00000485867 C7orf34Q96L11 122 aa4.94□□□□□ -1.62
SMC4-217ENST00000485867 OVOL2Q9BRP0 275 aa4.94□□□□□ -1.62
SMC4-217ENST00000485867 PBOV1Q9GZY1 135 aa4.94□□□□□ -1.62
SMC4-217ENST00000485867 WFDC10AQ9H1F0 79 aa4.94□□□□□ -1.62
SMC4-217ENST00000485867 MED20Q9H944 212 aa4.94□□□□□ -1.62
SMC4-217ENST00000485867 PLEKHA1Q9HB21 404 aa4.94□□□□□ -1.62
SMC4-217ENST00000485867 PARP11Q9NR21 331 aa4.94□□□□□ -1.62
SMC4-217ENST00000485867 RBFOX1Q9NWB1 397 aaKnown RBP4.94□□□□□ -1.62
SMC4-217ENST00000485867 NKIRAS1Q9NYS0 192 aa4.94□□□□□ -1.62
SMC4-217ENST00000485867 TAS2R1Q9NYW7 299 aa4.94□□□□□ -1.62
SMC4-217ENST00000485867 IL20Q9NYY1 176 aa4.94□□□□□ -1.62
SMC4-217ENST00000485867 MRM2Q9UI43 246 aaKnown RBP4.94□□□□□ -1.62
SMC4-217ENST00000485867 PKD1P98161 4303 aa4.93□□□□□ -1.62
SMC4-217ENST00000485867 TRBV2A0A0J9YWF9 115 aa4.93□□□□□ -1.62
SMC4-217ENST00000485867 TMEM269A0A1B0GVZ9 245 aa4.93□□□□□ -1.62
SMC4-217ENST00000485867 A0A1W2PPE3 182 aa4.93□□□□□ -1.62
SMC4-217ENST00000485867 FAM230AA0A1W2PPH8 454 aa4.93□□□□□ -1.62
SMC4-217ENST00000485867 A6NIN4 97 aa4.93□□□□□ -1.62
SMC4-217ENST00000485867 ZNF736B4DX44 427 aaPredicted RBP4.93□□□□□ -1.62
SMC4-217ENST00000485867 ARPC1BO15143 372 aaKnown RBP4.93□□□□□ -1.62
SMC4-217ENST00000485867 SOX15O60248 233 aa4.93□□□□□ -1.62
SMC4-217ENST00000485867 SELENOFO60613 162 aa4.93□□□□□ -1.62
SMC4-217ENST00000485867 GADD45GO95257 159 aa4.93□□□□□ -1.62
SMC4-217ENST00000485867 OR2H2O95918 312 aa4.93□□□□□ -1.62
SMC4-217ENST00000485867 IGHV3-11P01762 117 aa4.93□□□□□ -1.62
SMC4-217ENST00000485867 GAPDHP04406 335 aaKnown RBP4.93□□□□□ -1.62
SMC4-217ENST00000485867 TFAP2AP05549 437 aa4.93□□□□□ -1.62
SMC4-217ENST00000485867 CSN2P05814 226 aa4.93□□□□□ -1.62
SMC4-217ENST00000485867 CALCBP10092 127 aa4.93□□□□□ -1.62
SMC4-217ENST00000485867 PRKACAP17612 351 aa4.93□□□□□ -1.62
SMC4-217ENST00000485867 CD1BP29016 333 aa4.93□□□□□ -1.62
SMC4-217ENST00000485867 GLP1RP43220 463 aa4.93□□□□□ -1.62
SMC4-217ENST00000485867 NPBWR2P48146 333 aa4.93□□□□□ -1.62
SMC4-217ENST00000485867 NUDT2P50583 147 aa4.93□□□□□ -1.62
SMC4-217ENST00000485867 TNFRSF9Q07011 255 aa4.93□□□□□ -1.62
SMC4-217ENST00000485867 RAB40BQ12829 278 aa4.93□□□□□ -1.62
SMC4-217ENST00000485867 COQ5Q5HYK3 327 aa4.93□□□□□ -1.62
SMC4-217ENST00000485867 KRBOX4Q5JUW0 171 aa4.93□□□□□ -1.62
SMC4-217ENST00000485867 SPIN3Q5JUX0 258 aa4.93□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 183.2 ms