RNA–Protein interactions for RNA: ENST00000485842.5

HPS4-214, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 3

Gene HPS4, Length 973 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-214ENST00000485842 VBP1P61758 197 aa9.65□□□□□ -0.86
HPS4-214ENST00000485842 NCS1P62166 190 aa9.65□□□□□ -0.86
HPS4-214ENST00000485842 IDNKQ5T6J7 187 aa9.65□□□□□ -0.86
HPS4-214ENST00000485842 GPR107Q5VW38 600 aa9.65□□□□□ -0.86
HPS4-214ENST00000485842 OR52W1Q6IF63 320 aa9.65□□□□□ -0.86
HPS4-214ENST00000485842 USP43Q70EL4 1123 aa9.65□□□□□ -0.86
HPS4-214ENST00000485842 GPR141Q7Z602 305 aa9.65□□□□□ -0.86
HPS4-214ENST00000485842 OR56B1Q8NGI3 324 aa9.65□□□□□ -0.86
HPS4-214ENST00000485842 LGALS14Q8TCE9 139 aa9.65□□□□□ -0.86
HPS4-214ENST00000485842 C17orf50Q8WW18 174 aa9.65□□□□□ -0.86
HPS4-214ENST00000485842 NAA50Q9GZZ1 169 aaKnown RBP9.65□□□□□ -0.86
HPS4-214ENST00000485842 CHMP1AQ9HD42 196 aaPredicted RBP9.65□□□□□ -0.86
HPS4-214ENST00000485842 ESM1Q9NQ30 184 aa9.65□□□□□ -0.86
HPS4-214ENST00000485842 TNFRSF19Q9NS68 423 aa9.65□□□□□ -0.86
HPS4-214ENST00000485842 IDI2-AS1Q9NZ38 188 aa9.65□□□□□ -0.86
HPS4-214ENST00000485842 A0A075B6Q4 140 aa9.64□□□□□ -0.87
HPS4-214ENST00000485842 HOXA3O43365 443 aaPredicted RBP9.64□□□□□ -0.87
HPS4-214ENST00000485842 CA11O75493 328 aa9.64□□□□□ -0.87
HPS4-214ENST00000485842 IGHV3-7P01780 117 aa9.64□□□□□ -0.87
HPS4-214ENST00000485842 TFAP2AP05549 437 aa9.64□□□□□ -0.87
HPS4-214ENST00000485842 RAB6AP20340 208 aa9.64□□□□□ -0.87
HPS4-214ENST00000485842 ALDH3B2P48448 385 aa9.64□□□□□ -0.87
HPS4-214ENST00000485842 TUSC1Q2TAM9 212 aa9.64□□□□□ -0.87
HPS4-214ENST00000485842 MIDNQ504T8 468 aa9.64□□□□□ -0.87
HPS4-214ENST00000485842 C6orf183Q5T699 404 aa9.64□□□□□ -0.87
HPS4-214ENST00000485842 ZNF626Q68DY1 528 aa9.64□□□□□ -0.87
HPS4-214ENST00000485842 SLC16A12Q6ZSM3 486 aa9.64□□□□□ -0.87
HPS4-214ENST00000485842 LHFPL4Q7Z7J7 247 aa9.64□□□□□ -0.87
HPS4-214ENST00000485842 FAM89BQ8N5H3 189 aa9.64□□□□□ -0.87
HPS4-214ENST00000485842 ZDHHC22Q8N966 263 aa9.64□□□□□ -0.87
HPS4-214ENST00000485842 SETD6Q8TBK2 473 aa9.64□□□□□ -0.87
HPS4-214ENST00000485842 MRPL30Q8TCC3 161 aaKnown RBP9.64□□□□□ -0.87
HPS4-214ENST00000485842 ARL11Q969Q4 196 aa9.64□□□□□ -0.87
HPS4-214ENST00000485842 ARHGAP5-AS1Q96IT6 56 aa9.64□□□□□ -0.87
HPS4-214ENST00000485842 KIRREL1Q96J84 757 aa9.64□□□□□ -0.87
HPS4-214ENST00000485842 CLEC7AQ9BXN2 247 aa9.64□□□□□ -0.87
HPS4-214ENST00000485842 PECRQ9BY49 303 aa9.64□□□□□ -0.87
HPS4-214ENST00000485842 ATG5Q9H1Y0 275 aa9.64□□□□□ -0.87
HPS4-214ENST00000485842 ZNF286AQ9HBT8 521 aa9.64□□□□□ -0.87
HPS4-214ENST00000485842 METTL21EPA6NDL7 271 aa9.63□□□□□ -0.87
HPS4-214ENST00000485842 FOXI3A8MTJ6 420 aaPredicted RBP9.63□□□□□ -0.87
HPS4-214ENST00000485842 ODF3BA8MYP8 253 aa9.63□□□□□ -0.87
HPS4-214ENST00000485842 C12orf77C9JDV5 145 aa9.63□□□□□ -0.87
HPS4-214ENST00000485842 TRIM77I1YAP6 450 aa9.63□□□□□ -0.87
HPS4-214ENST00000485842 MELTFP08582 738 aa9.63□□□□□ -0.87
HPS4-214ENST00000485842 RCC1P18754 421 aaPredicted RBP9.63□□□□□ -0.87
HPS4-214ENST00000485842 PAX6P26367 422 aa9.63□□□□□ -0.87
HPS4-214ENST00000485842 RPS19P39019 145 aaKnown RBP9.63□□□□□ -0.87
HPS4-214ENST00000485842 MOGAT2Q3SYC2 334 aa9.63□□□□□ -0.87
HPS4-214ENST00000485842 PLA1AQ53H76 456 aa9.63□□□□□ -0.87
HPS4-214ENST00000485842 PLAC9Q5JTB6 97 aa9.63□□□□□ -0.87
HPS4-214ENST00000485842 UTF1Q5T230 341 aa9.63□□□□□ -0.87
HPS4-214ENST00000485842 Q6ZTK2 550 aa9.63□□□□□ -0.87
HPS4-214ENST00000485842 GAPTQ8N292 157 aa9.63□□□□□ -0.87
HPS4-214ENST00000485842 ABHD12Q8N2K0 398 aa9.63□□□□□ -0.87
HPS4-214ENST00000485842 PRR18Q8N4B5 295 aa9.63□□□□□ -0.87
HPS4-214ENST00000485842 OR11H6Q8NGC7 330 aa9.63□□□□□ -0.87
HPS4-214ENST00000485842 OR10R2Q8NGX6 335 aa9.63□□□□□ -0.87
HPS4-214ENST00000485842 NDNFQ8TB73 568 aa9.63□□□□□ -0.87
HPS4-214ENST00000485842 LEAP2Q969E1 77 aa9.63□□□□□ -0.87
HPS4-214ENST00000485842 RAB3CQ96E17 227 aa9.63□□□□□ -0.87
HPS4-214ENST00000485842 HDHD3Q9BSH5 251 aaPredicted RBP9.63□□□□□ -0.87
HPS4-214ENST00000485842 ZNRD1Q9P1U0 126 aa9.63□□□□□ -0.87
HPS4-214ENST00000485842 AK3Q9UIJ7 227 aa9.63□□□□□ -0.87
HPS4-214ENST00000485842 HSF4Q9ULV5 492 aa9.63□□□□□ -0.87
HPS4-214ENST00000485842 IGHV3-43A0A0B4J1X8 118 aa9.62□□□□□ -0.87
HPS4-214ENST00000485842 RNF212BA8MTL3 300 aa9.62□□□□□ -0.87
HPS4-214ENST00000485842 NPIPB11E5RHQ5 1161 aa9.62□□□□□ -0.87
HPS4-214ENST00000485842 C15orf65H3BRN8 121 aa9.62□□□□□ -0.87
HPS4-214ENST00000485842 SDCBPO00560 298 aaPredicted RBP9.62□□□□□ -0.87
HPS4-214ENST00000485842 TOR1AO14656 332 aa9.62□□□□□ -0.87
HPS4-214ENST00000485842 SPINT2O43291 252 aa9.62□□□□□ -0.87
HPS4-214ENST00000485842 ORC5O43913 435 aa9.62□□□□□ -0.87
HPS4-214ENST00000485842 GABARAPO95166 117 aa9.62□□□□□ -0.87
HPS4-214ENST00000485842 IGHV4-59P01825 116 aa9.62□□□□□ -0.87
HPS4-214ENST00000485842 IGHV3-43DP0DP04 118 aa9.62□□□□□ -0.87
HPS4-214ENST00000485842 GZMHP20718 246 aa9.62□□□□□ -0.87
HPS4-214ENST00000485842 GNG10P50151 68 aa9.62□□□□□ -0.87
HPS4-214ENST00000485842 TMEM50BP56557 158 aa9.62□□□□□ -0.87
HPS4-214ENST00000485842 UBA52P62987 128 aaKnown RBP9.62□□□□□ -0.87
HPS4-214ENST00000485842 SLC9A3R2Q15599 337 aa9.62□□□□□ -0.87
HPS4-214ENST00000485842 FAM189A2Q15884 450 aa9.62□□□□□ -0.87
HPS4-214ENST00000485842 KRTAP24-1Q3LI83 254 aa9.62□□□□□ -0.87
HPS4-214ENST00000485842 OLFML2AQ68BL7 652 aa9.62□□□□□ -0.87
HPS4-214ENST00000485842 TRAT1Q6PIZ9 186 aa9.62□□□□□ -0.87
HPS4-214ENST00000485842 Q6YL49 198 aa9.62□□□□□ -0.87
HPS4-214ENST00000485842 ANKRD13BQ86YJ7 626 aa9.62□□□□□ -0.87
HPS4-214ENST00000485842 OR5H6Q8NGV6 325 aa9.62□□□□□ -0.87
HPS4-214ENST00000485842 OR1L1Q8NH94 360 aa9.62□□□□□ -0.87
HPS4-214ENST00000485842 PTX4Q96A99 478 aa9.62□□□□□ -0.87
HPS4-214ENST00000485842 CMSS1Q9BQ75 279 aaKnown RBP9.62□□□□□ -0.87
HPS4-214ENST00000485842 PRDM13Q9H4Q3 707 aa9.62□□□□□ -0.87
HPS4-214ENST00000485842 TAF9BQ9HBM6 251 aa9.62□□□□□ -0.87
HPS4-214ENST00000485842 RAB9BQ9NP90 201 aa9.62□□□□□ -0.87
HPS4-214ENST00000485842 RHBDL2Q9NX52 303 aa9.62□□□□□ -0.87
HPS4-214ENST00000485842 KCNIP1Q9NZI2 227 aa9.62□□□□□ -0.87
HPS4-214ENST00000485842 TBL2Q9Y4P3 447 aaKnown RBP9.62□□□□□ -0.87
HPS4-214ENST00000485842 CUBNO60494 3623 aa9.61□□□□□ -0.87
HPS4-214ENST00000485842 RAB27BO00194 218 aa9.61□□□□□ -0.87
HPS4-214ENST00000485842 NAPSAO96009 420 aa9.61□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms