RNA–Protein interactions for RNA: ENST00000484733.6

SCFD1-206, Transcript of sec1 family domain containing 1, humanhuman

TSL 5

Gene SCFD1, Length 2,308 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-206ENST00000484733 HSD17B6O14756 317 aa9.05□□□□□ -0.96
SCFD1-206ENST00000484733 IGKV1D-33P01593 117 aa9.05□□□□□ -0.96
SCFD1-206ENST00000484733 IGKV1-33P01594 117 aa9.05□□□□□ -0.96
SCFD1-206ENST00000484733 CSTBP04080 98 aaKnown RBP9.05□□□□□ -0.96
SCFD1-206ENST00000484733 ZNF93P35789 620 aaPredicted RBP9.05□□□□□ -0.96
SCFD1-206ENST00000484733 GNG10P50151 68 aa9.05□□□□□ -0.96
SCFD1-206ENST00000484733 ETV1P50549 477 aa9.05□□□□□ -0.96
SCFD1-206ENST00000484733 PPP3R1P63098 170 aa9.05□□□□□ -0.96
SCFD1-206ENST00000484733 SLC35B1P78383 322 aa9.05□□□□□ -0.96
SCFD1-206ENST00000484733 HES1Q14469 280 aa9.05□□□□□ -0.96
SCFD1-206ENST00000484733 LTC4SQ16873 150 aa9.05□□□□□ -0.96
SCFD1-206ENST00000484733 TMEM30BQ3MIR4 351 aa9.05□□□□□ -0.96
SCFD1-206ENST00000484733 DDI2Q5TDH0 399 aa9.05□□□□□ -0.96
SCFD1-206ENST00000484733 XAF1Q6GPH4 301 aa9.05□□□□□ -0.96
SCFD1-206ENST00000484733 OR2W3Q7Z3T1 314 aa9.05□□□□□ -0.96
SCFD1-206ENST00000484733 TGIF2LXQ8IUE1 241 aa9.05□□□□□ -0.96
SCFD1-206ENST00000484733 TMEM106AQ96A25 262 aa9.05□□□□□ -0.96
SCFD1-206ENST00000484733 BABAM2Q9NXR7 383 aa9.05□□□□□ -0.96
SCFD1-206ENST00000484733 EXOSC1Q9Y3B2 195 aaKnown RBP9.05□□□□□ -0.96
SCFD1-206ENST00000484733 SERPINE3A8MV23 424 aa9.04□□□□□ -0.96
SCFD1-206ENST00000484733 OR7C1O76099 320 aaPredicted RBP9.04□□□□□ -0.96
SCFD1-206ENST00000484733 CDRT1O95170 752 aa9.04□□□□□ -0.96
SCFD1-206ENST00000484733 IGHV3-7P01780 117 aa9.04□□□□□ -0.96
SCFD1-206ENST00000484733 CD1BP29016 333 aa9.04□□□□□ -0.96
SCFD1-206ENST00000484733 GPR176Q14439 515 aa9.04□□□□□ -0.96
SCFD1-206ENST00000484733 VAX1Q5SQQ9 334 aa9.04□□□□□ -0.96
SCFD1-206ENST00000484733 SLC35E3Q7Z769 313 aa9.04□□□□□ -0.96
SCFD1-206ENST00000484733 ZNF329Q86UD4 541 aa9.04□□□□□ -0.96
SCFD1-206ENST00000484733 FOXRED2Q8IWF2 684 aa9.04□□□□□ -0.96
SCFD1-206ENST00000484733 STPG2Q8N412 459 aa9.04□□□□□ -0.96
SCFD1-206ENST00000484733 DPF1Q92782 380 aa9.04□□□□□ -0.96
SCFD1-206ENST00000484733 ST6GALNAC6Q969X2 333 aa9.04□□□□□ -0.96
SCFD1-206ENST00000484733 SMIM19Q96E16 107 aa9.04□□□□□ -0.96
SCFD1-206ENST00000484733 EAF1Q96JC9 268 aaPredicted RBP9.04□□□□□ -0.96
SCFD1-206ENST00000484733 P2RX4Q99571 388 aa9.04□□□□□ -0.96
SCFD1-206ENST00000484733 S100A13Q99584 98 aa9.04□□□□□ -0.96
SCFD1-206ENST00000484733 GFOD1Q9NXC2 390 aa9.04□□□□□ -0.96
SCFD1-206ENST00000484733 ZNF581Q9P0T4 197 aa9.04□□□□□ -0.96
SCFD1-206ENST00000484733 ZMAT5Q9UDW3 170 aaKnown RBP9.04□□□□□ -0.96
SCFD1-206ENST00000484733 SIRT4Q9Y6E7 314 aaPredicted RBP9.04□□□□□ -0.96
SCFD1-206ENST00000484733 WI2-2373I1.2A0A1W2PRP0 233 aa9.04□□□□□ -0.96
SCFD1-206ENST00000484733 GEMIN2O14893 280 aaKnown RBP9.04□□□□□ -0.96
SCFD1-206ENST00000484733 MT-ND4P03905 459 aa9.04□□□□□ -0.96
SCFD1-206ENST00000484733 ZNF497Q6ZNH5 498 aa9.04□□□□□ -0.96
SCFD1-206ENST00000484733 CDH26Q8IXH8 852 aa9.04□□□□□ -0.96
SCFD1-206ENST00000484733 ZNF555Q8NEP9 628 aa9.04□□□□□ -0.96
SCFD1-206ENST00000484733 OR2T10Q8NGZ9 312 aa9.04□□□□□ -0.96
SCFD1-206ENST00000484733 ARL11Q969Q4 196 aa9.04□□□□□ -0.96
SCFD1-206ENST00000484733 NOL4LQ96MY1 436 aaPredicted RBP9.04□□□□□ -0.96
SCFD1-206ENST00000484733 SPACA1Q9HBV2 294 aa9.04□□□□□ -0.96
SCFD1-206ENST00000484733 LIN7CQ9NUP9 197 aaKnown RBP9.04□□□□□ -0.96
SCFD1-206ENST00000484733 DIMT1Q9UNQ2 313 aaKnown RBP9.04□□□□□ -0.96
SCFD1-206ENST00000484733 NOTCH3Q9UM47 2321 aa9.04□□□□□ -0.96
SCFD1-206ENST00000484733 TRAV39A0A0B4J263 110 aa9.03□□□□□ -0.96
SCFD1-206ENST00000484733 IL3RAP26951 378 aa9.03□□□□□ -0.96
SCFD1-206ENST00000484733 ZNF137PP52743 207 aa9.03□□□□□ -0.96
SCFD1-206ENST00000484733 GP2P55259 537 aaKnown RBP9.03□□□□□ -0.96
SCFD1-206ENST00000484733 HNF4GQ14541 408 aa9.03□□□□□ -0.96
SCFD1-206ENST00000484733 SMN1Q16637 294 aaKnown RBP9.03□□□□□ -0.96
SCFD1-206ENST00000484733 OR2G6Q5TZ20 316 aa9.03□□□□□ -0.96
SCFD1-206ENST00000484733 DMKNQ6E0U4 476 aaPredicted RBP9.03□□□□□ -0.96
SCFD1-206ENST00000484733 MOB3BQ86TA1 216 aa9.03□□□□□ -0.96
SCFD1-206ENST00000484733 GAPTQ8N292 157 aa9.03□□□□□ -0.96
SCFD1-206ENST00000484733 OR8H1Q8NGG4 311 aa9.03□□□□□ -0.96
SCFD1-206ENST00000484733 MRPS24Q96EL2 167 aaKnown RBP9.03□□□□□ -0.96
SCFD1-206ENST00000484733 GON7Q9BXV9 100 aa9.03□□□□□ -0.96
SCFD1-206ENST00000484733 ABCG5Q9H222 651 aa9.03□□□□□ -0.96
SCFD1-206ENST00000484733 RAB9BQ9NP90 201 aa9.03□□□□□ -0.96
SCFD1-206ENST00000484733 RCC2Q9P258 522 aaKnown RBP9.03□□□□□ -0.96
SCFD1-206ENST00000484733 A0A1W2PPE3 182 aa9.03□□□□□ -0.96
SCFD1-206ENST00000484733 AP4M1O00189 453 aa9.03□□□□□ -0.96
SCFD1-206ENST00000484733 SDCBPO00560 298 aaPredicted RBP9.03□□□□□ -0.96
SCFD1-206ENST00000484733 TXNL1O43396 289 aa9.03□□□□□ -0.96
SCFD1-206ENST00000484733 GTF2F2P13984 249 aa9.03□□□□□ -0.96
SCFD1-206ENST00000484733 FSTP19883 344 aa9.03□□□□□ -0.96
SCFD1-206ENST00000484733 RIPK1Q13546 671 aa9.03□□□□□ -0.96
SCFD1-206ENST00000484733 DCTN2Q13561 401 aaKnown RBP9.03□□□□□ -0.96
SCFD1-206ENST00000484733 STX19Q8N4C7 294 aa9.03□□□□□ -0.96
SCFD1-206ENST00000484733 RNF152Q8N8N0 203 aa9.03□□□□□ -0.96
SCFD1-206ENST00000484733 Q8N9W7 124 aa9.03□□□□□ -0.96
SCFD1-206ENST00000484733 RTN4IP1Q8WWV3 396 aaPredicted RBP9.03□□□□□ -0.96
SCFD1-206ENST00000484733 PLSCR3Q9NRY6 295 aa9.03□□□□□ -0.96
SCFD1-206ENST00000484733 SMPD3Q9NY59 655 aaPredicted RBP9.03□□□□□ -0.96
SCFD1-206ENST00000484733 ZNF580Q9UK33 172 aa9.03□□□□□ -0.96
SCFD1-206ENST00000484733 DNAH9Q9NYC9 4486 aa9.02□□□□□ -0.96
SCFD1-206ENST00000484733 TRBV5-7A0A0A0MS05 114 aa9.02□□□□□ -0.97
SCFD1-206ENST00000484733 H0YHG0 523 aa9.02□□□□□ -0.97
SCFD1-206ENST00000484733 GLAP06280 429 aa9.02□□□□□ -0.97
SCFD1-206ENST00000484733 SERPINA2P20848 420 aa9.02□□□□□ -0.97
SCFD1-206ENST00000484733 GPR12P47775 334 aa9.02□□□□□ -0.97
SCFD1-206ENST00000484733 MED21Q13503 144 aa9.02□□□□□ -0.97
SCFD1-206ENST00000484733 PNLIPRP3Q17RR3 467 aa9.02□□□□□ -0.97
SCFD1-206ENST00000484733 Q499Y3 187 aa9.02□□□□□ -0.97
SCFD1-206ENST00000484733 YIF1BQ5BJH7 314 aa9.02□□□□□ -0.97
SCFD1-206ENST00000484733 TEX38Q6PEX7 206 aa9.02□□□□□ -0.97
SCFD1-206ENST00000484733 TRAT1Q6PIZ9 186 aa9.02□□□□□ -0.97
SCFD1-206ENST00000484733 ZNF695Q8IW36 515 aa9.02□□□□□ -0.97
SCFD1-206ENST00000484733 ZNF485Q8NCK3 441 aa9.02□□□□□ -0.97
SCFD1-206ENST00000484733 ZNF439Q8NDP4 499 aa9.02□□□□□ -0.97
SCFD1-206ENST00000484733 TMEM104Q8NE00 496 aa9.02□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms