RNA–Protein interactions for RNA: ENST00000484556.1

DDR1-245, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 2

Gene DDR1, Length 1,038 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-245ENST00000484556 Q6ZSR3 168 aa13.68□□□□□ -0.22
DDR1-245ENST00000484556 RTN4IP1Q8WWV3 396 aaPredicted RBP13.68□□□□□ -0.22
DDR1-245ENST00000484556 ZCCHC4Q9H5U6 513 aa13.68□□□□□ -0.22
DDR1-245ENST00000484556 MOB1AQ9H8S9 216 aa13.68□□□□□ -0.22
DDR1-245ENST00000484556 FAM53CQ9NYF3 392 aa13.68□□□□□ -0.22
DDR1-245ENST00000484556 TVP23BQ9NYZ1 205 aa13.68□□□□□ -0.22
DDR1-245ENST00000484556 DNAH11Q96DT5 4516 aa13.68□□□□□ -0.22
DDR1-245ENST00000484556 SHISA3A0PJX4 238 aa13.67□□□□□ -0.22
DDR1-245ENST00000484556 CCDC182A6NF36 153 aa13.67□□□□□ -0.22
DDR1-245ENST00000484556 GATBO75879 557 aaKnown RBP13.67□□□□□ -0.22
DDR1-245ENST00000484556 RGS11O94810 467 aa13.67□□□□□ -0.22
DDR1-245ENST00000484556 HSPB1P04792 205 aaKnown RBP13.67□□□□□ -0.22
DDR1-245ENST00000484556 HOXB6P17509 224 aaKnown RBP13.67□□□□□ -0.22
DDR1-245ENST00000484556 BLVRBP30043 206 aaPredicted RBP13.67□□□□□ -0.22
DDR1-245ENST00000484556 DAPP51397 102 aa13.67□□□□□ -0.22
DDR1-245ENST00000484556 CRISP1P54107 249 aa13.67□□□□□ -0.22
DDR1-245ENST00000484556 DNAL1Q4LDG9 190 aa13.67□□□□□ -0.22
DDR1-245ENST00000484556 Q6P435 159 aa13.67□□□□□ -0.22
DDR1-245ENST00000484556 MRGPRDQ8TDS7 321 aa13.67□□□□□ -0.22
DDR1-245ENST00000484556 RFT1Q96AA3 541 aa13.67□□□□□ -0.22
DDR1-245ENST00000484556 APOL4Q9BPW4 351 aa13.67□□□□□ -0.22
DDR1-245ENST00000484556 YIPF3Q9GZM5 350 aa13.67□□□□□ -0.22
DDR1-245ENST00000484556 CHST5Q9GZS9 411 aa13.67□□□□□ -0.22
DDR1-245ENST00000484556 COMMD4Q9H0A8 199 aa13.67□□□□□ -0.22
DDR1-245ENST00000484556 KRT84Q9NSB2 600 aa13.67□□□□□ -0.22
DDR1-245ENST00000484556 R4GMQ9 66 aa13.67□□□□□ -0.22
DDR1-245ENST00000484556 TRAV39A0A0B4J263 110 aa13.66□□□□□ -0.22
DDR1-245ENST00000484556 IGKV1-12A0A0C4DH73 117 aa13.66□□□□□ -0.22
DDR1-245ENST00000484556 A0A1W2PN81 502 aa13.66□□□□□ -0.22
DDR1-245ENST00000484556 H0Y980 276 aa13.66□□□□□ -0.22
DDR1-245ENST00000484556 PRKYO43930 277 aa13.66□□□□□ -0.22
DDR1-245ENST00000484556 IGKV1D-12P01611 117 aa13.66□□□□□ -0.22
DDR1-245ENST00000484556 CCL1P22362 96 aa13.66□□□□□ -0.22
DDR1-245ENST00000484556 CHRNA7P36544 502 aa13.66□□□□□ -0.22
DDR1-245ENST00000484556 FAHD1Q6P587 224 aa13.66□□□□□ -0.22
DDR1-245ENST00000484556 CEMP1Q6PRD7 247 aaPredicted RBP13.66□□□□□ -0.22
DDR1-245ENST00000484556 YIPF7Q8N8F6 280 aa13.66□□□□□ -0.22
DDR1-245ENST00000484556 MINDY2Q8NBR6 621 aa13.66□□□□□ -0.22
DDR1-245ENST00000484556 UTP4Q969X6 686 aaKnown RBP13.66□□□□□ -0.22
DDR1-245ENST00000484556 FLYWCH2Q96CP2 140 aaKnown RBP13.66□□□□□ -0.22
DDR1-245ENST00000484556 MBOAT4Q96T53 435 aa13.66□□□□□ -0.22
DDR1-245ENST00000484556 MYRFQ9Y2G1 1151 aa13.66□□□□□ -0.22
DDR1-245ENST00000484556 IZUMO1RA6ND01 250 aa13.65□□□□□ -0.22
DDR1-245ENST00000484556 NPIPB11E5RHQ5 1161 aa13.65□□□□□ -0.22
DDR1-245ENST00000484556 MED14OSP0DP75 135 aa13.65□□□□□ -0.22
DDR1-245ENST00000484556 C21orf33P30042 268 aaPredicted RBP13.65□□□□□ -0.22
DDR1-245ENST00000484556 RBP2P50120 134 aa13.65□□□□□ -0.22
DDR1-245ENST00000484556 ATP1B3P54709 279 aa13.65□□□□□ -0.22
DDR1-245ENST00000484556 EWSR1Q01844 656 aaKnown RBP eCLIP13.65□□□□□ -0.22
DDR1-245ENST00000484556 PTGES3Q15185 160 aaKnown RBP13.65□□□□□ -0.22
DDR1-245ENST00000484556 MMDQ15546 238 aa13.65□□□□□ -0.22
DDR1-245ENST00000484556 BCDIN3DQ7Z5W3 292 aaKnown RBP13.65□□□□□ -0.22
DDR1-245ENST00000484556 ZNF565Q8N9K5 539 aa13.65□□□□□ -0.22
DDR1-245ENST00000484556 NRBF2Q96F24 287 aa13.65□□□□□ -0.22
DDR1-245ENST00000484556 IGHV7-81A0A0B4J1V7 117 aa13.64□□□□□ -0.23
DDR1-245ENST00000484556 M0R129 80 aa13.64□□□□□ -0.23
DDR1-245ENST00000484556 SYT7O43581 403 aa13.64□□□□□ -0.23
DDR1-245ENST00000484556 MITFO75030 526 aaPredicted RBP13.64□□□□□ -0.23
DDR1-245ENST00000484556 EPHA2P29317 976 aa13.64□□□□□ -0.23
DDR1-245ENST00000484556 MTCP1P56278 107 aa13.64□□□□□ -0.23
DDR1-245ENST00000484556 OR51T1Q8NGJ9 327 aa13.64□□□□□ -0.23
DDR1-245ENST00000484556 TEX12Q9BXU0 123 aa13.64□□□□□ -0.23
DDR1-245ENST00000484556 WFDC10AQ9H1F0 79 aa13.64□□□□□ -0.23
DDR1-245ENST00000484556 LINC00574Q9H8X3 128 aa13.64□□□□□ -0.23
DDR1-245ENST00000484556 FBXO7Q9Y3I1 522 aa13.64□□□□□ -0.23
DDR1-245ENST00000484556 DNAH17Q9UFH2 4485 aa13.63□□□□□ -0.23
DDR1-245ENST00000484556 DEGS1O15121 323 aa13.63□□□□□ -0.23
DDR1-245ENST00000484556 CNIH1O95406 144 aa13.63□□□□□ -0.23
DDR1-245ENST00000484556 CD81P60033 236 aa13.63□□□□□ -0.23
DDR1-245ENST00000484556 EFNB1P98172 346 aa13.63□□□□□ -0.23
DDR1-245ENST00000484556 NDPQ00604 133 aa13.63□□□□□ -0.23
DDR1-245ENST00000484556 PDZK1IP1Q13113 114 aa13.63□□□□□ -0.23
DDR1-245ENST00000484556 DEFB125Q8N687 156 aa13.63□□□□□ -0.23
DDR1-245ENST00000484556 CHST4Q8NCG5 386 aa13.63□□□□□ -0.23
DDR1-245ENST00000484556 OR5D18Q8NGL1 313 aa13.63□□□□□ -0.23
DDR1-245ENST00000484556 ASB17Q8WXJ9 295 aa13.63□□□□□ -0.23
DDR1-245ENST00000484556 DNAJC9Q8WXX5 260 aa13.63□□□□□ -0.23
DDR1-245ENST00000484556 TMEM106AQ96A25 262 aa13.63□□□□□ -0.23
DDR1-245ENST00000484556 SPACA5Q96QH8 159 aa13.63□□□□□ -0.23
DDR1-245ENST00000484556 SIGLEC8Q9NYZ4 499 aa13.63□□□□□ -0.23
DDR1-245ENST00000484556 MRM2Q9UI43 246 aaKnown RBP13.63□□□□□ -0.23
DDR1-245ENST00000484556 SNX5Q9Y5X3 404 aa13.63□□□□□ -0.23
DDR1-245ENST00000484556 A3GALT2U3KPV4 340 aa13.63□□□□□ -0.23
DDR1-245ENST00000484556 IGKV1-9A0A0C4DH69 117 aa13.62□□□□□ -0.23
DDR1-245ENST00000484556 KDM4BO94953 1096 aa13.62□□□□□ -0.23
DDR1-245ENST00000484556 HLA-DRB1P01911 266 aa13.62□□□□□ -0.23
DDR1-245ENST00000484556 CXCR4P61073 352 aa13.62□□□□□ -0.23
DDR1-245ENST00000484556 LGALS9CQ6DKI2 356 aa13.62□□□□□ -0.23
DDR1-245ENST00000484556 LCN12Q6JVE5 192 aa13.62□□□□□ -0.23
DDR1-245ENST00000484556 ZNF322Q6U7Q0 402 aaPredicted RBP13.62□□□□□ -0.23
DDR1-245ENST00000484556 SLC16A12Q6ZSM3 486 aa13.62□□□□□ -0.23
DDR1-245ENST00000484556 UBALD1Q8TB05 177 aa13.62□□□□□ -0.23
DDR1-245ENST00000484556 FOXA2Q9Y261 457 aaPredicted RBP13.62□□□□□ -0.23
DDR1-245ENST00000484556 SLC31A2O15432 143 aa13.61□□□□□ -0.23
DDR1-245ENST00000484556 RPP14O95059 124 aaKnown RBP13.61□□□□□ -0.23
DDR1-245ENST00000484556 SERPINA3P01011 423 aa13.61□□□□□ -0.23
DDR1-245ENST00000484556 IL3RAP26951 378 aa13.61□□□□□ -0.23
DDR1-245ENST00000484556 RAB40BQ12829 278 aa13.61□□□□□ -0.23
DDR1-245ENST00000484556 CDK5R1Q15078 307 aa13.61□□□□□ -0.23
DDR1-245ENST00000484556 PAN3Q58A45 887 aaKnown RBP13.61□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms