RNA–Protein interactions for RNA: ENST00000484275.1

SCAF11-207, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 3

Gene SCAF11, Length 562 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-207ENST00000484275 ARHGAP32A7KAX9 2087 aa0.71□□□□□ -2.3
SCAF11-207ENST00000484275 RAB3GAP2Q9H2M9 1393 aa0.7□□□□□ -2.3
SCAF11-207ENST00000484275 DICER1Q9UPY3 1922 aaKnown RBP0.7□□□□□ -2.3
SCAF11-207ENST00000484275 TRAV8-2A0A0B4J237 113 aa0.7□□□□□ -2.3
SCAF11-207ENST00000484275 LOC100506127A0A0U1RQW1 187 aa0.7□□□□□ -2.3
SCAF11-207ENST00000484275 A0A1B0GW15 77 aa0.7□□□□□ -2.3
SCAF11-207ENST00000484275 ZNF879B4DU55 563 aa0.7□□□□□ -2.3
SCAF11-207ENST00000484275 H3BP45 60 aa0.7□□□□□ -2.3
SCAF11-207ENST00000484275 CDIPTO14735 213 aa0.7□□□□□ -2.3
SCAF11-207ENST00000484275 FABP7O15540 132 aa0.7□□□□□ -2.3
SCAF11-207ENST00000484275 SH2D1AO60880 128 aa0.7□□□□□ -2.3
SCAF11-207ENST00000484275 LDOC1O95751 146 aaPredicted RBP0.7□□□□□ -2.3
SCAF11-207ENST00000484275 IGKV5-2P06315 115 aa0.7□□□□□ -2.3
SCAF11-207ENST00000484275 GUSBP08236 651 aa0.7□□□□□ -2.3
SCAF11-207ENST00000484275 TPM1P09493 284 aa0.7□□□□□ -2.3
SCAF11-207ENST00000484275 CCL2P13500 99 aa0.7□□□□□ -2.3
SCAF11-207ENST00000484275 ZNF3P17036 446 aa0.7□□□□□ -2.3
SCAF11-207ENST00000484275 TSPOP30536 169 aa0.7□□□□□ -2.3
SCAF11-207ENST00000484275 PYCR1P32322 319 aa0.7□□□□□ -2.3
SCAF11-207ENST00000484275 MAGEA3P43357 314 aa0.7□□□□□ -2.3
SCAF11-207ENST00000484275 KCNJ3P48549 501 aa0.7□□□□□ -2.3
SCAF11-207ENST00000484275 HSPA13P48723 471 aa0.7□□□□□ -2.3
SCAF11-207ENST00000484275 INPP1P49441 399 aa0.7□□□□□ -2.3
SCAF11-207ENST00000484275 ETV1P50549 477 aa0.7□□□□□ -2.3
SCAF11-207ENST00000484275 PLTPP55058 493 aa0.7□□□□□ -2.3
SCAF11-207ENST00000484275 PAFAH1B3Q15102 231 aaKnown RBP0.7□□□□□ -2.3
SCAF11-207ENST00000484275 TRAM1Q15629 374 aa0.7□□□□□ -2.3
SCAF11-207ENST00000484275 CST6Q15828 149 aa0.7□□□□□ -2.3
SCAF11-207ENST00000484275 BSXQ3C1V8 233 aa0.7□□□□□ -2.3
SCAF11-207ENST00000484275 CEACAM21Q3KPI0 293 aa0.7□□□□□ -2.3
SCAF11-207ENST00000484275 Q3ZCU0 254 aa0.7□□□□□ -2.3
SCAF11-207ENST00000484275 SPIN4Q56A73 249 aa0.7□□□□□ -2.3
SCAF11-207ENST00000484275 AADACL4Q5VUY2 407 aa0.7□□□□□ -2.3
SCAF11-207ENST00000484275 OLIG3Q7RTU3 272 aa0.7□□□□□ -2.3
SCAF11-207ENST00000484275 MARCH3Q86UD3 253 aa0.7□□□□□ -2.3
SCAF11-207ENST00000484275 LRRC6Q86X45 466 aa0.7□□□□□ -2.3
SCAF11-207ENST00000484275 NIT1Q86X76 327 aa0.7□□□□□ -2.3
SCAF11-207ENST00000484275 C10orf107Q8IVU9 208 aa0.7□□□□□ -2.3
SCAF11-207ENST00000484275 HS3ST5Q8IZT8 346 aa0.7□□□□□ -2.3
SCAF11-207ENST00000484275 ZIC4Q8N9L1 334 aa0.7□□□□□ -2.3
SCAF11-207ENST00000484275 CDRT4Q8N9R6 151 aa0.7□□□□□ -2.3
SCAF11-207ENST00000484275 SPPL2BQ8TCT7 592 aa0.7□□□□□ -2.3
SCAF11-207ENST00000484275 KCTD4Q8WVF5 259 aa0.7□□□□□ -2.3
SCAF11-207ENST00000484275 MAL2Q969L2 176 aa0.7□□□□□ -2.3
SCAF11-207ENST00000484275 C19orf60Q96EN9 201 aa0.7□□□□□ -2.3
SCAF11-207ENST00000484275 CATSPER2Q96P56 530 aa0.7□□□□□ -2.3
SCAF11-207ENST00000484275 OR8B2Q96RD0 313 aa0.7□□□□□ -2.3
SCAF11-207ENST00000484275 EBPLQ9BY08 206 aa0.7□□□□□ -2.3
SCAF11-207ENST00000484275 PRRG3Q9BZD7 231 aa0.7□□□□□ -2.3
SCAF11-207ENST00000484275 MFSD1Q9H3U5 465 aa0.7□□□□□ -2.3
SCAF11-207ENST00000484275 HAUS4Q9H6D7 363 aa0.7□□□□□ -2.3
SCAF11-207ENST00000484275 MAT2BQ9NZL9 334 aa0.7□□□□□ -2.3
SCAF11-207ENST00000484275 POMPQ9Y244 141 aa0.7□□□□□ -2.3
SCAF11-207ENST00000484275 COL18A1P39060 1754 aa0.7□□□□□ -2.3
SCAF11-207ENST00000484275 ZFHX2Q9C0A1 2572 aaPredicted RBP0.69□□□□□ -2.3
SCAF11-207ENST00000484275 SYNRGQ9UMZ2 1314 aa0.69□□□□□ -2.3
SCAF11-207ENST00000484275 IGHV3OR15-7A0A075B7D8 119 aa0.69□□□□□ -2.3
SCAF11-207ENST00000484275 A6NED7 52 aa0.69□□□□□ -2.3
SCAF11-207ENST00000484275 ARGFXA6NJG6 315 aa0.69□□□□□ -2.3
SCAF11-207ENST00000484275 FGF16O43320 207 aa0.69□□□□□ -2.3
SCAF11-207ENST00000484275 SGCEO43556 437 aa0.69□□□□□ -2.3
SCAF11-207ENST00000484275 DENRO43583 198 aaKnown RBP0.69□□□□□ -2.3
SCAF11-207ENST00000484275 SHOX2O60902 331 aaPredicted RBP0.69□□□□□ -2.3
SCAF11-207ENST00000484275 FADS2O95864 444 aaKnown RBP0.69□□□□□ -2.3
SCAF11-207ENST00000484275 SPNP16150 400 aa0.69□□□□□ -2.3
SCAF11-207ENST00000484275 AKR1C4P17516 323 aa0.69□□□□□ -2.3
SCAF11-207ENST00000484275 C1QTNF8P60827 252 aa0.69□□□□□ -2.3
SCAF11-207ENST00000484275 PRDX1Q06830 199 aaKnown RBP0.69□□□□□ -2.3
SCAF11-207ENST00000484275 STX3Q13277 289 aa0.69□□□□□ -2.3
SCAF11-207ENST00000484275 FLOT2Q14254 428 aa0.69□□□□□ -2.3
SCAF11-207ENST00000484275 HES1Q14469 280 aa0.69□□□□□ -2.3
SCAF11-207ENST00000484275 USF2Q15853 346 aaPredicted RBP0.69□□□□□ -2.3
SCAF11-207ENST00000484275 C10orf91Q5T1B1 145 aa0.69□□□□□ -2.3
SCAF11-207ENST00000484275 ELP2Q6IA86 826 aa0.69□□□□□ -2.3
SCAF11-207ENST00000484275 KRTCAP2Q8N6L1 136 aa0.69□□□□□ -2.3
SCAF11-207ENST00000484275 OR2AE1Q8NHA4 323 aa0.69□□□□□ -2.3
SCAF11-207ENST00000484275 FAM45AQ8TCE6 357 aa0.69□□□□□ -2.3
SCAF11-207ENST00000484275 GTF2H4Q92759 462 aa0.69□□□□□ -2.3
SCAF11-207ENST00000484275 HIST1H2BAQ96A08 127 aa0.69□□□□□ -2.3
SCAF11-207ENST00000484275 PPWD1Q96BP3 646 aaKnown RBP0.69□□□□□ -2.3
SCAF11-207ENST00000484275 REEP6Q96HR9 211 aa0.69□□□□□ -2.3
SCAF11-207ENST00000484275 HBEGFQ99075 208 aa0.69□□□□□ -2.3
SCAF11-207ENST00000484275 TAPBPLQ9BX59 468 aa0.69□□□□□ -2.3
SCAF11-207ENST00000484275 ARL6Q9H0F7 186 aa0.69□□□□□ -2.3
SCAF11-207ENST00000484275 IFT46Q9NQC8 304 aa0.69□□□□□ -2.3
SCAF11-207ENST00000484275 COMMD9Q9P000 198 aa0.69□□□□□ -2.3
SCAF11-207ENST00000484275 OR5V1Q9UGF6 321 aa0.69□□□□□ -2.3
SCAF11-207ENST00000484275 RPUSD1Q9UJJ7 312 aaKnown RBP0.69□□□□□ -2.3
SCAF11-207ENST00000484275 LINC00588Q9Y4M8 146 aa0.69□□□□□ -2.3
SCAF11-207ENST00000484275 TBL2Q9Y4P3 447 aaKnown RBP0.69□□□□□ -2.3
SCAF11-207ENST00000484275 U3KQK5 164 aa0.69□□□□□ -2.3
SCAF11-207ENST00000484275 ADAMTSL1Q8N6G6 1762 aa0.69□□□□□ -2.3
SCAF11-207ENST00000484275 PTPRKQ15262 1439 aa0.69□□□□□ -2.3
SCAF11-207ENST00000484275 WDR90Q96KV7 1748 aa0.69□□□□□ -2.3
SCAF11-207ENST00000484275 SLIT2O94813 1529 aa0.69□□□□□ -2.3
SCAF11-207ENST00000484275 KDM5BQ9UGL1 1544 aa0.69□□□□□ -2.3
SCAF11-207ENST00000484275 ABCB11O95342 1321 aa0.68□□□□□ -2.3
SCAF11-207ENST00000484275 DSCAML1Q8TD84 2053 aa0.68□□□□□ -2.3
SCAF11-207ENST00000484275 A0A1B0GTI1 187 aa0.68□□□□□ -2.3
SCAF11-207ENST00000484275 ZNF860A6NHJ4 632 aa0.68□□□□□ -2.3
Retrieved 100 of 20,778 RNA–protein pairs in 58.4 ms