RNA–Protein interactions for RNA: ENST00000482647.5

SEC13-217, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 2

Gene SEC13, Length 782 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-217ENST00000482647 TRAPPC2LQ9UL33 140 aa17■□□□□ 0.31
SEC13-217ENST00000482647 TBL2Q9Y4P3 447 aaKnown RBP17■□□□□ 0.31
SEC13-217ENST00000482647 NPIPB11E5RHQ5 1161 aa16.99■□□□□ 0.31
SEC13-217ENST00000482647 LDLRAD4O15165 306 aa16.99■□□□□ 0.31
SEC13-217ENST00000482647 NFYBP25208 207 aa16.99■□□□□ 0.31
SEC13-217ENST00000482647 SDC2P34741 201 aa16.99■□□□□ 0.31
SEC13-217ENST00000482647 GAPTQ8N292 157 aa16.99■□□□□ 0.31
SEC13-217ENST00000482647 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP16.99■□□□□ 0.31
SEC13-217ENST00000482647 C17orf50Q8WW18 174 aa16.99■□□□□ 0.31
SEC13-217ENST00000482647 DYRK2Q92630 601 aa16.99■□□□□ 0.31
SEC13-217ENST00000482647 YIPF6Q96EC8 236 aa16.99■□□□□ 0.31
SEC13-217ENST00000482647 FAAP24Q9BTP7 215 aa16.99■□□□□ 0.31
SEC13-217ENST00000482647 CENPOQ9BU64 300 aa16.99■□□□□ 0.31
SEC13-217ENST00000482647 TNFRSF19Q9NS68 423 aa16.99■□□□□ 0.31
SEC13-217ENST00000482647 PLEKHJ1Q9NW61 149 aa16.99■□□□□ 0.31
SEC13-217ENST00000482647 IDI2-AS1Q9NZ38 188 aa16.99■□□□□ 0.31
SEC13-217ENST00000482647 ZNRD1Q9P1U0 126 aa16.99■□□□□ 0.31
SEC13-217ENST00000482647 DNHD1Q96M86 4753 aa16.98■□□□□ 0.31
SEC13-217ENST00000482647 A0A087X0M5 115 aa16.98■□□□□ 0.31
SEC13-217ENST00000482647 TMEM272A0A1B0GTI8 110 aa16.98■□□□□ 0.31
SEC13-217ENST00000482647 A0A1B0GX30 115 aa16.98■□□□□ 0.31
SEC13-217ENST00000482647 SMIM30A4D0T7 59 aa16.98■□□□□ 0.31
SEC13-217ENST00000482647 ORC5O43913 435 aa16.98■□□□□ 0.31
SEC13-217ENST00000482647 AIREO43918 545 aa16.98■□□□□ 0.31
SEC13-217ENST00000482647 IGHV4-59P01825 116 aa16.98■□□□□ 0.31
SEC13-217ENST00000482647 SSTR5P35346 364 aa16.98■□□□□ 0.31
SEC13-217ENST00000482647 GDNFP39905 211 aa16.98■□□□□ 0.31
SEC13-217ENST00000482647 FAM189A2Q15884 450 aa16.98■□□□□ 0.31
SEC13-217ENST00000482647 C16orf87Q6PH81 154 aa16.98■□□□□ 0.31
SEC13-217ENST00000482647 BAIAP2L2Q6UXY1 529 aa16.98■□□□□ 0.31
SEC13-217ENST00000482647 C6orf201Q7Z4U5 140 aa16.98■□□□□ 0.31
SEC13-217ENST00000482647 OR56B1Q8NGI3 324 aa16.98■□□□□ 0.31
SEC13-217ENST00000482647 RFESDQ8TAC1 157 aa16.98■□□□□ 0.31
SEC13-217ENST00000482647 ZNF596Q8TC21 504 aa16.98■□□□□ 0.31
SEC13-217ENST00000482647 ARL11Q969Q4 196 aa16.98■□□□□ 0.31
SEC13-217ENST00000482647 MALSU1Q96EH3 234 aa16.98■□□□□ 0.31
SEC13-217ENST00000482647 KIRREL1Q96J84 757 aa16.98■□□□□ 0.31
SEC13-217ENST00000482647 SULT4A1Q9BR01 284 aa16.98■□□□□ 0.31
SEC13-217ENST00000482647 MEGF9Q9H1U4 602 aa16.98■□□□□ 0.31
SEC13-217ENST00000482647 RAB9BQ9NP90 201 aa16.98■□□□□ 0.31
SEC13-217ENST00000482647 DSCAML1Q8TD84 2053 aa16.98■□□□□ 0.31
SEC13-217ENST00000482647 A0A0A6YYD4 124 aa16.97■□□□□ 0.31
SEC13-217ENST00000482647 BTBD17A6NE02 478 aa16.97■□□□□ 0.31
SEC13-217ENST00000482647 TOR1AO14656 332 aa16.97■□□□□ 0.31
SEC13-217ENST00000482647 SOCS1O15524 211 aa16.97■□□□□ 0.31
SEC13-217ENST00000482647 CD34P28906 385 aa16.97■□□□□ 0.31
SEC13-217ENST00000482647 PRRX1P54821 245 aa16.97■□□□□ 0.31
SEC13-217ENST00000482647 C6orf183Q5T699 404 aa16.97■□□□□ 0.31
SEC13-217ENST00000482647 MINOS1Q5TGZ0 78 aa16.97■□□□□ 0.31
SEC13-217ENST00000482647 TRAT1Q6PIZ9 186 aa16.97■□□□□ 0.31
SEC13-217ENST00000482647 SLC16A12Q6ZSM3 486 aa16.97■□□□□ 0.31
SEC13-217ENST00000482647 LHFPL4Q7Z7J7 247 aa16.97■□□□□ 0.31
SEC13-217ENST00000482647 OR4K15Q8NH41 348 aa16.97■□□□□ 0.31
SEC13-217ENST00000482647 RNF167Q9H6Y7 350 aa16.97■□□□□ 0.31
SEC13-217ENST00000482647 MINOS1-NBL1R4GNA1 71 aa16.97■□□□□ 0.31
SEC13-217ENST00000482647 KIAA2026Q5HYC2 2103 aa16.96■□□□□ 0.31
SEC13-217ENST00000482647 C15orf65H3BRN8 121 aa16.96■□□□□ 0.31
SEC13-217ENST00000482647 SMIM18P0DKX4 95 aa16.96■□□□□ 0.31
SEC13-217ENST00000482647 SLC2A2P11168 524 aaPredicted RBP16.96■□□□□ 0.31
SEC13-217ENST00000482647 RAB6AP20340 208 aa16.96■□□□□ 0.31
SEC13-217ENST00000482647 HTR1DP28221 377 aa16.96■□□□□ 0.31
SEC13-217ENST00000482647 VEGFCP49767 419 aa16.96■□□□□ 0.31
SEC13-217ENST00000482647 ACTG1P63261 375 aa16.96■□□□□ 0.31
SEC13-217ENST00000482647 MXD1Q05195 221 aa16.96■□□□□ 0.31
SEC13-217ENST00000482647 AANATQ16613 207 aa16.96■□□□□ 0.31
SEC13-217ENST00000482647 LTC4SQ16873 150 aa16.96■□□□□ 0.31
SEC13-217ENST00000482647 OR5R1Q8NH85 324 aa16.96■□□□□ 0.31
SEC13-217ENST00000482647 PTX4Q96A99 478 aa16.96■□□□□ 0.31
SEC13-217ENST00000482647 CHIAQ9BZP6 476 aa16.96■□□□□ 0.31
SEC13-217ENST00000482647 ZNF286AQ9HBT8 521 aa16.96■□□□□ 0.31
SEC13-217ENST00000482647 KCNIP1Q9NZI2 227 aa16.96■□□□□ 0.31
SEC13-217ENST00000482647 DAPK2Q9UIK4 370 aa16.96■□□□□ 0.31
SEC13-217ENST00000482647 HSF4Q9ULV5 492 aa16.96■□□□□ 0.31
SEC13-217ENST00000482647 A0A0B4J203 849 aa16.95■□□□□ 0.3
SEC13-217ENST00000482647 FAM172BPA6NC97 362 aa16.95■□□□□ 0.3
SEC13-217ENST00000482647 SPINT2O43291 252 aa16.95■□□□□ 0.3
SEC13-217ENST00000482647 SSX2Q16385 188 aa16.95■□□□□ 0.3
SEC13-217ENST00000482647 SFXN4Q6P4A7 337 aa16.95■□□□□ 0.3
SEC13-217ENST00000482647 Q6ZTK2 550 aa16.95■□□□□ 0.3
SEC13-217ENST00000482647 OR4P4Q8NGL7 312 aa16.95■□□□□ 0.3
SEC13-217ENST00000482647 OR9G1Q8NH87 305 aa16.95■□□□□ 0.3
SEC13-217ENST00000482647 NDNFQ8TB73 568 aa16.95■□□□□ 0.3
SEC13-217ENST00000482647 MRPL30Q8TCC3 161 aaKnown RBP16.95■□□□□ 0.3
SEC13-217ENST00000482647 GCDHQ92947 438 aaPredicted RBP16.95■□□□□ 0.3
SEC13-217ENST00000482647 CREB3L1Q96BA8 519 aa16.95■□□□□ 0.3
SEC13-217ENST00000482647 SSX3Q99909 188 aa16.95■□□□□ 0.3
SEC13-217ENST00000482647 RIMS4Q9H426 269 aaPredicted RBP16.95■□□□□ 0.3
SEC13-217ENST00000482647 METTL21EPA6NDL7 271 aa16.94■□□□□ 0.3
SEC13-217ENST00000482647 FOXI3A8MTJ6 420 aaPredicted RBP16.94■□□□□ 0.3
SEC13-217ENST00000482647 C12orf77C9JDV5 145 aa16.94■□□□□ 0.3
SEC13-217ENST00000482647 IGLV1-47P01700 117 aa16.94■□□□□ 0.3
SEC13-217ENST00000482647 RCC1P18754 421 aaPredicted RBP16.94■□□□□ 0.3
SEC13-217ENST00000482647 EFNB2P52799 333 aa16.94■□□□□ 0.3
SEC13-217ENST00000482647 TMEM50BP56557 158 aa16.94■□□□□ 0.3
SEC13-217ENST00000482647 PLA2G7Q13093 441 aa16.94■□□□□ 0.3
SEC13-217ENST00000482647 LRRC75BQ2VPJ9 315 aa16.94■□□□□ 0.3
SEC13-217ENST00000482647 ZNF554Q86TJ5 538 aa16.94■□□□□ 0.3
SEC13-217ENST00000482647 OR52M1Q8NGK5 317 aa16.94■□□□□ 0.3
SEC13-217ENST00000482647 OR13F1Q8NGS4 319 aa16.94■□□□□ 0.3
SEC13-217ENST00000482647 SPATA3Q8NHX4 192 aa16.94■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms