RNA–Protein interactions for RNA: ENST00000479625.1

GPNMB-211, Transcript of glycoprotein nmb, humanhuman

TSL 2

Gene GPNMB, Length 788 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPNMB-211ENST00000479625 DNAH2Q9P225 4427 aa7.44□□□□□ -1.22
GPNMB-211ENST00000479625 C12orf77C9JDV5 145 aa7.43□□□□□ -1.22
GPNMB-211ENST00000479625 NPIPB11E5RHQ5 1161 aa7.43□□□□□ -1.22
GPNMB-211ENST00000479625 SLC25A17O43808 307 aa7.43□□□□□ -1.22
GPNMB-211ENST00000479625 KDM4BO94953 1096 aa7.43□□□□□ -1.22
GPNMB-211ENST00000479625 MOSP00540 346 aa7.43□□□□□ -1.22
GPNMB-211ENST00000479625 IGLV1-51P01701 117 aa7.43□□□□□ -1.22
GPNMB-211ENST00000479625 HMGN1P05114 100 aa7.43□□□□□ -1.22
GPNMB-211ENST00000479625 OR5H8P0DN80 308 aa7.43□□□□□ -1.22
GPNMB-211ENST00000479625 CNTFRP26992 372 aa7.43□□□□□ -1.22
GPNMB-211ENST00000479625 RAB9AP51151 201 aa7.43□□□□□ -1.22
GPNMB-211ENST00000479625 HDXQ7Z353 690 aa7.43□□□□□ -1.22
GPNMB-211ENST00000479625 HS3ST5Q8IZT8 346 aa7.43□□□□□ -1.22
GPNMB-211ENST00000479625 PRSS35Q8N3Z0 413 aa7.43□□□□□ -1.22
GPNMB-211ENST00000479625 RPP25LQ8N5L8 163 aaKnown RBP7.43□□□□□ -1.22
GPNMB-211ENST00000479625 DNAAF1Q8NEP3 725 aa7.43□□□□□ -1.22
GPNMB-211ENST00000479625 OR51T1Q8NGJ9 327 aa7.43□□□□□ -1.22
GPNMB-211ENST00000479625 PLPPR1Q8TBJ4 325 aa7.43□□□□□ -1.22
GPNMB-211ENST00000479625 GIPC3Q8TF64 312 aa7.43□□□□□ -1.22
GPNMB-211ENST00000479625 CMTM5Q96DZ9 223 aa7.43□□□□□ -1.22
GPNMB-211ENST00000479625 OR4C12Q96R67 309 aa7.43□□□□□ -1.22
GPNMB-211ENST00000479625 MNTQ99583 582 aa7.43□□□□□ -1.22
GPNMB-211ENST00000479625 TOLLIPQ9H0E2 274 aa7.43□□□□□ -1.22
GPNMB-211ENST00000479625 ADGRL4Q9HBW9 690 aa7.43□□□□□ -1.22
GPNMB-211ENST00000479625 ACTR3BQ9P1U1 418 aa7.43□□□□□ -1.22
GPNMB-211ENST00000479625 ZNF580Q9UK33 172 aa7.43□□□□□ -1.22
GPNMB-211ENST00000479625 IGHV3-43A0A0B4J1X8 118 aa7.42□□□□□ -1.22
GPNMB-211ENST00000479625 TRAV41A0A0B4J266 112 aa7.42□□□□□ -1.22
GPNMB-211ENST00000479625 ZNF670-ZNF695F2Z2N8 137 aa7.42□□□□□ -1.22
GPNMB-211ENST00000479625 H0YJX3 145 aa7.42□□□□□ -1.22
GPNMB-211ENST00000479625 DEGS1O15121 323 aa7.42□□□□□ -1.22
GPNMB-211ENST00000479625 SLC31A2O15432 143 aa7.42□□□□□ -1.22
GPNMB-211ENST00000479625 SOX15O60248 233 aa7.42□□□□□ -1.22
GPNMB-211ENST00000479625 SERPINA3P01011 423 aa7.42□□□□□ -1.22
GPNMB-211ENST00000479625 IGHV3-11P01762 117 aa7.42□□□□□ -1.22
GPNMB-211ENST00000479625 LGALS1P09382 135 aaKnown RBP7.42□□□□□ -1.22
GPNMB-211ENST00000479625 IGHV3-43DP0DP04 118 aa7.42□□□□□ -1.22
GPNMB-211ENST00000479625 OSMP13725 252 aa7.42□□□□□ -1.22
GPNMB-211ENST00000479625 ATF1P18846 271 aa7.42□□□□□ -1.22
GPNMB-211ENST00000479625 C21orf33P30042 268 aaPredicted RBP7.42□□□□□ -1.22
GPNMB-211ENST00000479625 KIR3DL2P43630 455 aa7.42□□□□□ -1.22
GPNMB-211ENST00000479625 ECSCRQ19T08 205 aa7.42□□□□□ -1.22
GPNMB-211ENST00000479625 PAN3Q58A45 887 aaKnown RBP7.42□□□□□ -1.22
GPNMB-211ENST00000479625 RSBN1Q5VWQ0 802 aaPredicted RBP7.42□□□□□ -1.22
GPNMB-211ENST00000479625 RDH10Q8IZV5 341 aa7.42□□□□□ -1.22
GPNMB-211ENST00000479625 PGAM4Q8N0Y7 254 aa7.42□□□□□ -1.22
GPNMB-211ENST00000479625 YIPF7Q8N8F6 280 aa7.42□□□□□ -1.22
GPNMB-211ENST00000479625 ZNF565Q8N9K5 539 aa7.42□□□□□ -1.22
GPNMB-211ENST00000479625 CHST4Q8NCG5 386 aa7.42□□□□□ -1.22
GPNMB-211ENST00000479625 IL17DQ8TAD2 202 aa7.42□□□□□ -1.22
GPNMB-211ENST00000479625 OPALINQ96PE5 141 aa7.42□□□□□ -1.22
GPNMB-211ENST00000479625 MBOAT4Q96T53 435 aa7.42□□□□□ -1.22
GPNMB-211ENST00000479625 TMED9Q9BVK6 235 aa7.42□□□□□ -1.22
GPNMB-211ENST00000479625 HIPK2Q9H2X6 1198 aa7.42□□□□□ -1.22
GPNMB-211ENST00000479625 ZCCHC4Q9H5U6 513 aa7.42□□□□□ -1.22
GPNMB-211ENST00000479625 LINC00574Q9H8X3 128 aa7.42□□□□□ -1.22
GPNMB-211ENST00000479625 SLC25A19Q9HC21 320 aa7.42□□□□□ -1.22
GPNMB-211ENST00000479625 NEK6Q9HC98 313 aa7.42□□□□□ -1.22
GPNMB-211ENST00000479625 TVP23BQ9NYZ1 205 aa7.42□□□□□ -1.22
GPNMB-211ENST00000479625 FBXO7Q9Y3I1 522 aa7.42□□□□□ -1.22
GPNMB-211ENST00000479625 TRAV24A0A0B4J272 114 aa7.41□□□□□ -1.22
GPNMB-211ENST00000479625 A0A1W2PN81 502 aa7.41□□□□□ -1.22
GPNMB-211ENST00000479625 FAM90A10PA6NDY2 464 aa7.41□□□□□ -1.22
GPNMB-211ENST00000479625 PRKYO43930 277 aa7.41□□□□□ -1.22
GPNMB-211ENST00000479625 APOL3O95236 402 aa7.41□□□□□ -1.22
GPNMB-211ENST00000479625 BRI3O95415 125 aa7.41□□□□□ -1.22
GPNMB-211ENST00000479625 CD1BP29016 333 aa7.41□□□□□ -1.22
GPNMB-211ENST00000479625 BLVRBP30043 206 aaPredicted RBP7.41□□□□□ -1.22
GPNMB-211ENST00000479625 CHRNA7P36544 502 aa7.41□□□□□ -1.22
GPNMB-211ENST00000479625 NDPQ00604 133 aa7.41□□□□□ -1.22
GPNMB-211ENST00000479625 MMDQ15546 238 aa7.41□□□□□ -1.22
GPNMB-211ENST00000479625 RNLSQ5VYX0 342 aa7.41□□□□□ -1.22
GPNMB-211ENST00000479625 SATL1Q86VE3 508 aa7.41□□□□□ -1.22
GPNMB-211ENST00000479625 ANKRD13BQ86YJ7 626 aa7.41□□□□□ -1.22
GPNMB-211ENST00000479625 OR10AC1Q8NH08 325 aa7.41□□□□□ -1.22
GPNMB-211ENST00000479625 PP6455Q8WZ26 134 aa7.41□□□□□ -1.22
GPNMB-211ENST00000479625 FGGYQ96C11 551 aa7.41□□□□□ -1.22
GPNMB-211ENST00000479625 NABP2Q9BQ15 211 aa7.41□□□□□ -1.22
GPNMB-211ENST00000479625 CHCHD6Q9BRQ6 235 aa7.41□□□□□ -1.22
GPNMB-211ENST00000479625 ADI1Q9BV57 179 aa7.41□□□□□ -1.22
GPNMB-211ENST00000479625 MAGIXQ9H6Y5 334 aa7.41□□□□□ -1.22
GPNMB-211ENST00000479625 KRT84Q9NSB2 600 aa7.41□□□□□ -1.22
GPNMB-211ENST00000479625 ZNF581Q9P0T4 197 aa7.41□□□□□ -1.22
GPNMB-211ENST00000479625 STUB1Q9UNE7 303 aa7.41□□□□□ -1.22
GPNMB-211ENST00000479625 IGHV7-81A0A0B4J1V7 117 aa7.4□□□□□ -1.22
GPNMB-211ENST00000479625 KRT8P05787 483 aa7.4□□□□□ -1.22
GPNMB-211ENST00000479625 PRKACGP22612 351 aa7.4□□□□□ -1.22
GPNMB-211ENST00000479625 PRKACBP22694 351 aa7.4□□□□□ -1.22
GPNMB-211ENST00000479625 PRDX6P30041 224 aa7.4□□□□□ -1.22
GPNMB-211ENST00000479625 ACTR3P61158 418 aa7.4□□□□□ -1.22
GPNMB-211ENST00000479625 PMS2P11Q13670 270 aa7.4□□□□□ -1.22
GPNMB-211ENST00000479625 DEFB107AQ8IZN7 70 aa7.4□□□□□ -1.22
GPNMB-211ENST00000479625 OR8H1Q8NGG4 311 aa7.4□□□□□ -1.22
GPNMB-211ENST00000479625 OR13C9Q8NGT0 318 aa7.4□□□□□ -1.22
GPNMB-211ENST00000479625 RITA1Q96K30 269 aa7.4□□□□□ -1.22
GPNMB-211ENST00000479625 NR1H4Q96RI1 486 aaPredicted RBP7.4□□□□□ -1.22
GPNMB-211ENST00000479625 THAP7Q9BT49 309 aaPredicted RBP7.4□□□□□ -1.22
GPNMB-211ENST00000479625 TUBA4BQ9H853 241 aa7.4□□□□□ -1.22
GPNMB-211ENST00000479625 PLEKHA3Q9HB20 300 aa7.4□□□□□ -1.22
GPNMB-211ENST00000479625 CLN6Q9NWW5 311 aa7.4□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 84 ms