RNA–Protein interactions for RNA: ENST00000479300.1

VCP-205, Transcript of valosin containing protein, humanhuman

TSL 1 (best)

Gene VCP, Length 559 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCP-205ENST00000479300 OR4Q3Q8NH05 313 aa5.51□□□□□ -1.53
VCP-205ENST00000479300 RNASE11Q8TAA1 199 aaKnown RBP5.51□□□□□ -1.53
VCP-205ENST00000479300 SMIM4Q8WVI0 70 aa5.51□□□□□ -1.53
VCP-205ENST00000479300 EDARADDQ8WWZ3 215 aa5.51□□□□□ -1.53
VCP-205ENST00000479300 REEP6Q96HR9 211 aa5.51□□□□□ -1.53
VCP-205ENST00000479300 TMEM68Q96MH6 324 aa5.51□□□□□ -1.53
VCP-205ENST00000479300 PCGF1Q9BSM1 259 aa5.51□□□□□ -1.53
VCP-205ENST00000479300 ABHD6Q9BV23 337 aa5.51□□□□□ -1.53
VCP-205ENST00000479300 RTL8AQ9BWD3 113 aa5.51□□□□□ -1.53
VCP-205ENST00000479300 CHIAQ9BZP6 476 aa5.51□□□□□ -1.53
VCP-205ENST00000479300 NMNAT2Q9BZQ4 307 aa5.51□□□□□ -1.53
VCP-205ENST00000479300 RGCCQ9H4X1 137 aa5.51□□□□□ -1.53
VCP-205ENST00000479300 PNRC2Q9NPJ4 139 aaKnown RBP5.51□□□□□ -1.53
VCP-205ENST00000479300 TNFRSF19Q9NS68 423 aa5.51□□□□□ -1.53
VCP-205ENST00000479300 H2AFY2Q9P0M6 372 aaPredicted RBP5.51□□□□□ -1.53
VCP-205ENST00000479300 DNAJB11Q9UBS4 358 aa5.51□□□□□ -1.53
VCP-205ENST00000479300 LAMP5Q9UJQ1 280 aa5.51□□□□□ -1.53
VCP-205ENST00000479300 UBE2QL1A1L167 161 aa5.5□□□□□ -1.53
VCP-205ENST00000479300 SMIM30A4D0T7 59 aa5.5□□□□□ -1.53
VCP-205ENST00000479300 M0QZ24 198 aa5.5□□□□□ -1.53
VCP-205ENST00000479300 NDUFB3O43676 98 aa5.5□□□□□ -1.53
VCP-205ENST00000479300 TOX4O94842 621 aa5.5□□□□□ -1.53
VCP-205ENST00000479300 NDUFA7O95182 113 aa5.5□□□□□ -1.53
VCP-205ENST00000479300 SIX6O95475 246 aa5.5□□□□□ -1.53
VCP-205ENST00000479300 IFNA10P01566 189 aa5.5□□□□□ -1.53
VCP-205ENST00000479300 IGHA1P01876 353 aa5.5□□□□□ -1.53
VCP-205ENST00000479300 GYPAP02724 150 aa5.5□□□□□ -1.53
VCP-205ENST00000479300 LIMS3P0CW19 117 aa5.5□□□□□ -1.53
VCP-205ENST00000479300 LIMS4P0CW20 117 aa5.5□□□□□ -1.53
VCP-205ENST00000479300 CLUP10909 449 aa5.5□□□□□ -1.53
VCP-205ENST00000479300 OTX1P32242 354 aaPredicted RBP5.5□□□□□ -1.53
VCP-205ENST00000479300 GPX4P36969 197 aaPredicted RBP5.5□□□□□ -1.53
VCP-205ENST00000479300 PMELP40967 661 aa5.5□□□□□ -1.53
VCP-205ENST00000479300 KCNJ3P48549 501 aa5.5□□□□□ -1.53
VCP-205ENST00000479300 CCR6P51684 374 aa5.5□□□□□ -1.53
VCP-205ENST00000479300 ZNF121P58317 390 aaPredicted RBP5.5□□□□□ -1.53
VCP-205ENST00000479300 TAS2R60P59551 318 aa5.5□□□□□ -1.53
VCP-205ENST00000479300 SPCS3P61009 180 aa5.5□□□□□ -1.53
VCP-205ENST00000479300 MRPS10P82664 201 aaKnown RBP5.5□□□□□ -1.53
VCP-205ENST00000479300 EFNB1P98172 346 aa5.5□□□□□ -1.53
VCP-205ENST00000479300 HABP2Q14520 560 aaPredicted RBP5.5□□□□□ -1.53
VCP-205ENST00000479300 ZNF345Q14585 488 aa5.5□□□□□ -1.53
VCP-205ENST00000479300 SMCO1Q147U7 214 aa5.5□□□□□ -1.53
VCP-205ENST00000479300 PCK2Q16822 640 aa5.5□□□□□ -1.53
VCP-205ENST00000479300 BEAN1Q3B7T3 259 aa5.5□□□□□ -1.53
VCP-205ENST00000479300 ANKRD39Q53RE8 183 aa5.5□□□□□ -1.53
VCP-205ENST00000479300 OR2B11Q5JQS5 317 aa5.5□□□□□ -1.53
VCP-205ENST00000479300 SLC35D3Q5M8T2 416 aa5.5□□□□□ -1.53
VCP-205ENST00000479300 FAM74A1Q5RGS3 127 aa5.5□□□□□ -1.53
VCP-205ENST00000479300 FAM201AQ5SY85 155 aa5.5□□□□□ -1.53
VCP-205ENST00000479300 SFXN4Q6P4A7 337 aa5.5□□□□□ -1.53
VCP-205ENST00000479300 PLBD1Q6P4A8 553 aa5.5□□□□□ -1.53
VCP-205ENST00000479300 Q6ZTK2 550 aa5.5□□□□□ -1.53
VCP-205ENST00000479300 SLC16A9Q7RTY1 509 aa5.5□□□□□ -1.53
VCP-205ENST00000479300 SERPINA12Q8IW75 414 aa5.5□□□□□ -1.53
VCP-205ENST00000479300 IQCF1Q8N6M8 205 aa5.5□□□□□ -1.53
VCP-205ENST00000479300 C15orf54Q8N8G6 183 aa5.5□□□□□ -1.53
VCP-205ENST00000479300 SAMD12Q8N8I0 201 aa5.5□□□□□ -1.53
VCP-205ENST00000479300 OR10S1Q8NGN2 331 aa5.5□□□□□ -1.53
VCP-205ENST00000479300 TRMT10AQ8TBZ6 339 aaKnown RBP5.5□□□□□ -1.53
VCP-205ENST00000479300 LRRC29Q8WV35 223 aa5.5□□□□□ -1.53
VCP-205ENST00000479300 TCTEX1D2Q8WW35 142 aa5.5□□□□□ -1.53
VCP-205ENST00000479300 ZNRF4Q8WWF5 429 aa5.5□□□□□ -1.53
VCP-205ENST00000479300 GATAD2BQ8WXI9 593 aa5.5□□□□□ -1.53
VCP-205ENST00000479300 RNFT2Q96EX2 444 aa5.5□□□□□ -1.53
VCP-205ENST00000479300 FAM71F1Q96KD3 344 aaPredicted RBP5.5□□□□□ -1.53
VCP-205ENST00000479300 ABHD1Q96SE0 405 aa5.5□□□□□ -1.53
VCP-205ENST00000479300 CMSS1Q9BQ75 279 aaKnown RBP5.5□□□□□ -1.53
VCP-205ENST00000479300 MED20Q9H944 212 aa5.5□□□□□ -1.53
VCP-205ENST00000479300 BEX1Q9HBH7 125 aa5.5□□□□□ -1.53
VCP-205ENST00000479300 TMEM138Q9NPI0 162 aa5.5□□□□□ -1.53
VCP-205ENST00000479300 ABRACLQ9P1F3 81 aa5.5□□□□□ -1.53
VCP-205ENST00000479300 ZNF391Q9UJN7 358 aa5.5□□□□□ -1.53
VCP-205ENST00000479300 MPC1Q9Y5U8 109 aa5.5□□□□□ -1.53
VCP-205ENST00000479300 TMEM14AQ9Y6G1 99 aa5.5□□□□□ -1.53
VCP-205ENST00000479300 DOCK11Q5JSL3 2073 aa5.49□□□□□ -1.53
VCP-205ENST00000479300 TMEM238LA0A1B0GVL6 79 aa5.49□□□□□ -1.53
VCP-205ENST00000479300 SHISA3A0PJX4 238 aa5.49□□□□□ -1.53
VCP-205ENST00000479300 C9orf170A2RU37 121 aa5.49□□□□□ -1.53
VCP-205ENST00000479300 CLPSL1A2RUU4 121 aa5.49□□□□□ -1.53
VCP-205ENST00000479300 BTBD17A6NE02 478 aa5.49□□□□□ -1.53
VCP-205ENST00000479300 SLC22A31A6NKX4 558 aa5.49□□□□□ -1.53
VCP-205ENST00000479300 TMEM210A6NLX4 147 aa5.49□□□□□ -1.53
VCP-205ENST00000479300 SRRM5B3KS81 715 aa5.49□□□□□ -1.53
VCP-205ENST00000479300 ZNF879B4DU55 563 aa5.49□□□□□ -1.53
VCP-205ENST00000479300 G3V4G9 280 aa5.49□□□□□ -1.53
VCP-205ENST00000479300 GPR31O00270 319 aa5.49□□□□□ -1.53
VCP-205ENST00000479300 SLC31A2O15432 143 aa5.49□□□□□ -1.53
VCP-205ENST00000479300 ARPC5O15511 151 aa5.49□□□□□ -1.53
VCP-205ENST00000479300 MT-ND4P03905 459 aa5.49□□□□□ -1.53
VCP-205ENST00000479300 MUC1P15941 1255 aaPredicted RBP5.49□□□□□ -1.53
VCP-205ENST00000479300 PSMB10P40306 273 aa5.49□□□□□ -1.53
VCP-205ENST00000479300 GSK3AP49840 483 aa5.49□□□□□ -1.53
VCP-205ENST00000479300 RIDAP52758 137 aaKnown RBP5.49□□□□□ -1.53
VCP-205ENST00000479300 HCCSP53701 268 aa5.49□□□□□ -1.53
VCP-205ENST00000479300 PROK1P58294 105 aa5.49□□□□□ -1.53
VCP-205ENST00000479300 CD81P60033 236 aa5.49□□□□□ -1.53
VCP-205ENST00000479300 DGCR2P98153 550 aa5.49□□□□□ -1.53
VCP-205ENST00000479300 FAM3AP98173 230 aa5.49□□□□□ -1.53
VCP-205ENST00000479300 CDK5Q00535 292 aa5.49□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 202.1 ms