RNA–Protein interactions for RNA: ENST00000479161.5

C9orf3-217, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 5

Gene C9orf3, Length 942 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-217ENST00000479161 ABHD12Q8N2K0 398 aa12.55□□□□□ -0.4
C9orf3-217ENST00000479161 C8orf31Q8N9H6 132 aa12.55□□□□□ -0.4
C9orf3-217ENST00000479161 FAM3DQ96BQ1 224 aa12.55□□□□□ -0.4
C9orf3-217ENST00000479161 KIRREL1Q96J84 757 aa12.55□□□□□ -0.4
C9orf3-217ENST00000479161 NEDD4LQ96PU5 975 aa12.55□□□□□ -0.4
C9orf3-217ENST00000479161 MBNL3Q9NUK0 354 aaKnown RBP12.55□□□□□ -0.4
C9orf3-217ENST00000479161 A0A1B0GUS0 222 aa12.54□□□□□ -0.4
C9orf3-217ENST00000479161 SHISA3A0PJX4 238 aa12.54□□□□□ -0.4
C9orf3-217ENST00000479161 OOSP1A8MZH6 123 aa12.54□□□□□ -0.4
C9orf3-217ENST00000479161 C15orf65H3BRN8 121 aa12.54□□□□□ -0.4
C9orf3-217ENST00000479161 COX7A1P24310 79 aa12.54□□□□□ -0.4
C9orf3-217ENST00000479161 HTR1DP28221 377 aa12.54□□□□□ -0.4
C9orf3-217ENST00000479161 GLP1RP43220 463 aa12.54□□□□□ -0.4
C9orf3-217ENST00000479161 PRRX1P54821 245 aa12.54□□□□□ -0.4
C9orf3-217ENST00000479161 PRB3Q04118 309 aaPredicted RBP12.54□□□□□ -0.4
C9orf3-217ENST00000479161 LRRC75BQ2VPJ9 315 aa12.54□□□□□ -0.4
C9orf3-217ENST00000479161 C2orf76Q3KRA6 126 aa12.54□□□□□ -0.4
C9orf3-217ENST00000479161 C6orf183Q5T699 404 aa12.54□□□□□ -0.4
C9orf3-217ENST00000479161 C22orf42Q6IC83 251 aa12.54□□□□□ -0.4
C9orf3-217ENST00000479161 LIAT1Q6ZQX7 453 aa12.54□□□□□ -0.4
C9orf3-217ENST00000479161 OR9G1Q8NH87 305 aa12.54□□□□□ -0.4
C9orf3-217ENST00000479161 NEK7Q8TDX7 302 aa12.54□□□□□ -0.4
C9orf3-217ENST00000479161 GCDHQ92947 438 aaPredicted RBP12.54□□□□□ -0.4
C9orf3-217ENST00000479161 FAM46BQ96A09 425 aa12.54□□□□□ -0.4
C9orf3-217ENST00000479161 KCTD7Q96MP8 289 aa12.54□□□□□ -0.4
C9orf3-217ENST00000479161 CHIAQ9BZP6 476 aa12.54□□□□□ -0.4
C9orf3-217ENST00000479161 LPAR5Q9H1C0 372 aa12.54□□□□□ -0.4
C9orf3-217ENST00000479161 RIMS4Q9H426 269 aaPredicted RBP12.54□□□□□ -0.4
C9orf3-217ENST00000479161 ETAA1Q9NY74 926 aa12.54□□□□□ -0.4
C9orf3-217ENST00000479161 IDI2-AS1Q9NZ38 188 aa12.54□□□□□ -0.4
C9orf3-217ENST00000479161 DPM3Q9P2X0 92 aa12.54□□□□□ -0.4
C9orf3-217ENST00000479161 VPREB3Q9UKI3 123 aa12.54□□□□□ -0.4
C9orf3-217ENST00000479161 RAB22AQ9UL26 194 aa12.54□□□□□ -0.4
C9orf3-217ENST00000479161 MMP24Q9Y5R2 645 aa12.54□□□□□ -0.4
C9orf3-217ENST00000479161 TENM1Q9UKZ4 2725 aa12.53□□□□□ -0.4
C9orf3-217ENST00000479161 TRBV6-6A0A0A6YYG2 114 aa12.53□□□□□ -0.4
C9orf3-217ENST00000479161 FOXI3A8MTJ6 420 aaPredicted RBP12.53□□□□□ -0.4
C9orf3-217ENST00000479161 NOTOA8MTQ0 251 aa12.53□□□□□ -0.4
C9orf3-217ENST00000479161 F2RL2O00254 374 aa12.53□□□□□ -0.4
C9orf3-217ENST00000479161 NDUFA7O95182 113 aa12.53□□□□□ -0.4
C9orf3-217ENST00000479161 IGHV4-59P01825 116 aa12.53□□□□□ -0.4
C9orf3-217ENST00000479161 CD36P16671 472 aa12.53□□□□□ -0.4
C9orf3-217ENST00000479161 RAB6AP20340 208 aa12.53□□□□□ -0.4
C9orf3-217ENST00000479161 SCAND1P57086 179 aa12.53□□□□□ -0.4
C9orf3-217ENST00000479161 ACTG1P63261 375 aa12.53□□□□□ -0.4
C9orf3-217ENST00000479161 NEDD8Q15843 81 aa12.53□□□□□ -0.4
C9orf3-217ENST00000479161 PRAMEF5Q5TYX0 476 aa12.53□□□□□ -0.4
C9orf3-217ENST00000479161 STEAP3Q658P3 488 aa12.53□□□□□ -0.4
C9orf3-217ENST00000479161 OR10K2Q6IF99 312 aa12.53□□□□□ -0.4
C9orf3-217ENST00000479161 DTX3Q8N9I9 347 aa12.53□□□□□ -0.4
C9orf3-217ENST00000479161 OR51D1Q8NGF3 324 aa12.53□□□□□ -0.4
C9orf3-217ENST00000479161 OR4P4Q8NGL7 312 aa12.53□□□□□ -0.4
C9orf3-217ENST00000479161 SSX3Q99909 188 aa12.53□□□□□ -0.4
C9orf3-217ENST00000479161 A0A1W2PRD5 423 aa12.52□□□□□ -0.41
C9orf3-217ENST00000479161 A0A1W2PRF3 423 aa12.52□□□□□ -0.41
C9orf3-217ENST00000479161 A0A1W2PRM7 423 aa12.52□□□□□ -0.41
C9orf3-217ENST00000479161 MEX3AA1L020 520 aaKnown RBP12.52□□□□□ -0.41
C9orf3-217ENST00000479161 BLVRBP30043 206 aaPredicted RBP12.52□□□□□ -0.41
C9orf3-217ENST00000479161 CEACAM3P40198 252 aa12.52□□□□□ -0.41
C9orf3-217ENST00000479161 HLA-DRB5Q30154 266 aa12.52□□□□□ -0.41
C9orf3-217ENST00000479161 LY6G6FQ5SQ64 297 aa12.52□□□□□ -0.41
C9orf3-217ENST00000479161 BRICD5Q6PL45 260 aa12.52□□□□□ -0.41
C9orf3-217ENST00000479161 LINC00311Q8N616 119 aa12.52□□□□□ -0.41
C9orf3-217ENST00000479161 OR56B1Q8NGI3 324 aa12.52□□□□□ -0.41
C9orf3-217ENST00000479161 MRGPRDQ8TDS7 321 aa12.52□□□□□ -0.41
C9orf3-217ENST00000479161 DUX5Q96PT3 197 aa12.52□□□□□ -0.41
C9orf3-217ENST00000479161 RAB18Q9NP72 206 aa12.52□□□□□ -0.41
C9orf3-217ENST00000479161 ANK2Q01484 3957 aa12.51□□□□□ -0.41
C9orf3-217ENST00000479161 FAM181BA6NEQ2 426 aa12.51□□□□□ -0.41
C9orf3-217ENST00000479161 LEUTXA8MZ59 168 aa12.51□□□□□ -0.41
C9orf3-217ENST00000479161 LY6LH3BQJ8 138 aa12.51□□□□□ -0.41
C9orf3-217ENST00000479161 BUB1B-PAK6H3BSN5 160 aa12.51□□□□□ -0.41
C9orf3-217ENST00000479161 TOR1AO14656 332 aa12.51□□□□□ -0.41
C9orf3-217ENST00000479161 SPINT2O43291 252 aa12.51□□□□□ -0.41
C9orf3-217ENST00000479161 GPR137BO60478 399 aa12.51□□□□□ -0.41
C9orf3-217ENST00000479161 NAPSAO96009 420 aa12.51□□□□□ -0.41
C9orf3-217ENST00000479161 CRYBA1P05813 215 aa12.51□□□□□ -0.41
C9orf3-217ENST00000479161 OMGP23515 440 aa12.51□□□□□ -0.41
C9orf3-217ENST00000479161 GDNFP39905 211 aa12.51□□□□□ -0.41
C9orf3-217ENST00000479161 LOXL3P58215 753 aa12.51□□□□□ -0.41
C9orf3-217ENST00000479161 DYNC1I2Q13409 638 aaKnown RBP12.51□□□□□ -0.41
C9orf3-217ENST00000479161 P2RY14Q15391 338 aa12.51□□□□□ -0.41
C9orf3-217ENST00000479161 LDLRAD2Q5SZI1 272 aa12.51□□□□□ -0.41
C9orf3-217ENST00000479161 ZNF880Q6PDB4 577 aa12.51□□□□□ -0.41
C9orf3-217ENST00000479161 LHFPL4Q7Z7J7 247 aa12.51□□□□□ -0.41
C9orf3-217ENST00000479161 NR2C2APQ86WQ0 139 aa12.51□□□□□ -0.41
C9orf3-217ENST00000479161 PIFOQ8TCI5 191 aa12.51□□□□□ -0.41
C9orf3-217ENST00000479161 C17orf50Q8WW18 174 aa12.51□□□□□ -0.41
C9orf3-217ENST00000479161 ARL11Q969Q4 196 aa12.51□□□□□ -0.41
C9orf3-217ENST00000479161 MMP28Q9H239 520 aa12.51□□□□□ -0.41
C9orf3-217ENST00000479161 OR51E2Q9H255 320 aa12.51□□□□□ -0.41
C9orf3-217ENST00000479161 ZNF286AQ9HBT8 521 aa12.51□□□□□ -0.41
C9orf3-217ENST00000479161 PLEKHJ1Q9NW61 149 aa12.51□□□□□ -0.41
C9orf3-217ENST00000479161 ING3Q9NXR8 418 aa12.51□□□□□ -0.41
C9orf3-217ENST00000479161 PITPNC1Q9UKF7 332 aa12.51□□□□□ -0.41
C9orf3-217ENST00000479161 TRAPPC2LQ9UL33 140 aa12.51□□□□□ -0.41
C9orf3-217ENST00000479161 MGAT4AQ9UM21 535 aa12.51□□□□□ -0.41
C9orf3-217ENST00000479161 AMMECR1Q9Y4X0 333 aaPredicted RBP12.51□□□□□ -0.41
C9orf3-217ENST00000479161 A0A0A6YYD4 124 aa12.5□□□□□ -0.41
C9orf3-217ENST00000479161 TMEM272A0A1B0GTI8 110 aa12.5□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms