RNA–Protein interactions for RNA: ENST00000478473.1

C9orf3-215, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 3

Gene C9orf3, Length 895 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-215ENST00000478473 GLAP06280 429 aa18.74■□□□□ 0.59
C9orf3-215ENST00000478473 MYF6P23409 242 aa18.74■□□□□ 0.59
C9orf3-215ENST00000478473 NFYBP25208 207 aa18.74■□□□□ 0.59
C9orf3-215ENST00000478473 SSTR5P35346 364 aa18.74■□□□□ 0.59
C9orf3-215ENST00000478473 HABP2Q14520 560 aaPredicted RBP18.74■□□□□ 0.59
C9orf3-215ENST00000478473 Q6ZS46 218 aa18.74■□□□□ 0.59
C9orf3-215ENST00000478473 JAGN1Q8N5M9 183 aa18.74■□□□□ 0.59
C9orf3-215ENST00000478473 C8orf31Q8N9H6 132 aa18.74■□□□□ 0.59
C9orf3-215ENST00000478473 PHYHIPQ92561 330 aa18.74■□□□□ 0.59
C9orf3-215ENST00000478473 AKR1E2Q96JD6 320 aa18.74■□□□□ 0.59
C9orf3-215ENST00000478473 RBM14Q96PK6 669 aaKnown RBP18.74■□□□□ 0.59
C9orf3-215ENST00000478473 ANKRD60Q9BZ19 345 aa18.74■□□□□ 0.59
C9orf3-215ENST00000478473 PTGES3LE9PB15 166 aa18.73■□□□□ 0.59
C9orf3-215ENST00000478473 H0YHG0 523 aa18.73■□□□□ 0.59
C9orf3-215ENST00000478473 OR2F2O95006 317 aa18.73■□□□□ 0.59
C9orf3-215ENST00000478473 MAS1P04201 325 aa18.73■□□□□ 0.59
C9orf3-215ENST00000478473 Q3ZCU0 254 aa18.73■□□□□ 0.59
C9orf3-215ENST00000478473 ACSM3Q53FZ2 586 aa18.73■□□□□ 0.59
C9orf3-215ENST00000478473 OR5M11Q96RB7 305 aa18.73■□□□□ 0.59
C9orf3-215ENST00000478473 CA11O75493 328 aa18.72■□□□□ 0.59
C9orf3-215ENST00000478473 CSF1P09603 554 aa18.72■□□□□ 0.59
C9orf3-215ENST00000478473 MNDAP41218 407 aa18.72■□□□□ 0.59
C9orf3-215ENST00000478473 RBM39Q14498 530 aaKnown RBP18.72■□□□□ 0.59
C9orf3-215ENST00000478473 AWAT2Q6E213 333 aa18.72■□□□□ 0.59
C9orf3-215ENST00000478473 LINC00311Q8N616 119 aa18.72■□□□□ 0.59
C9orf3-215ENST00000478473 RFESDQ8TAC1 157 aa18.72■□□□□ 0.59
C9orf3-215ENST00000478473 SGCDQ92629 289 aa18.72■□□□□ 0.59
C9orf3-215ENST00000478473 Q96M66 194 aa18.72■□□□□ 0.59
C9orf3-215ENST00000478473 TPRKBQ9Y3C4 175 aa18.72■□□□□ 0.59
C9orf3-215ENST00000478473 AMY1AP04745 511 aa18.71■□□□□ 0.59
C9orf3-215ENST00000478473 AMY2AP04746 511 aa18.71■□□□□ 0.59
C9orf3-215ENST00000478473 VSIG10L2P0DP72 767 aa18.71■□□□□ 0.59
C9orf3-215ENST00000478473 MGMTP16455 207 aa18.71■□□□□ 0.59
C9orf3-215ENST00000478473 LOXL3P58215 753 aa18.71■□□□□ 0.59
C9orf3-215ENST00000478473 MADCAM1Q13477 382 aa18.71■□□□□ 0.59
C9orf3-215ENST00000478473 FBLN7Q53RD9 439 aa18.71■□□□□ 0.59
C9orf3-215ENST00000478473 C1orf100Q5SVJ3 147 aa18.71■□□□□ 0.59
C9orf3-215ENST00000478473 ATAD3CQ5T2N8 411 aa18.71■□□□□ 0.59
C9orf3-215ENST00000478473 LRRTM1Q86UE6 522 aa18.71■□□□□ 0.59
C9orf3-215ENST00000478473 OR8H3Q8N146 312 aa18.71■□□□□ 0.59
C9orf3-215ENST00000478473 TMEM104Q8NE00 496 aa18.71■□□□□ 0.59
C9orf3-215ENST00000478473 ISYNA1Q9NPH2 558 aa18.71■□□□□ 0.59
C9orf3-215ENST00000478473 TRAV39A0A0B4J263 110 aa18.7■□□□□ 0.58
C9orf3-215ENST00000478473 A0A1W2PPI3 338 aa18.7■□□□□ 0.58
C9orf3-215ENST00000478473 MCRIP1C9JLW8 97 aa18.7■□□□□ 0.58
C9orf3-215ENST00000478473 KCNAB3O43448 404 aa18.7■□□□□ 0.58
C9orf3-215ENST00000478473 CD24P25063 80 aa18.7■□□□□ 0.58
C9orf3-215ENST00000478473 RAB7AP51149 207 aa18.7■□□□□ 0.58
C9orf3-215ENST00000478473 TPBGQ13641 420 aa18.7■□□□□ 0.58
C9orf3-215ENST00000478473 INSL4Q14641 139 aa18.7■□□□□ 0.58
C9orf3-215ENST00000478473 TMEM30BQ3MIR4 351 aa18.7■□□□□ 0.58
C9orf3-215ENST00000478473 SIGIRRQ6IA17 410 aa18.7■□□□□ 0.58
C9orf3-215ENST00000478473 RPEQ96AT9 228 aa18.7■□□□□ 0.58
C9orf3-215ENST00000478473 SLC25A33Q9BSK2 321 aa18.7■□□□□ 0.58
C9orf3-215ENST00000478473 M0QZK8 103 aa18.69■□□□□ 0.58
C9orf3-215ENST00000478473 FBXO24O75426 580 aa18.69■□□□□ 0.58
C9orf3-215ENST00000478473 UBBP0CG47 229 aa18.69■□□□□ 0.58
C9orf3-215ENST00000478473 RAB12Q6IQ22 244 aa18.69■□□□□ 0.58
C9orf3-215ENST00000478473 LEAP2Q969E1 77 aa18.69■□□□□ 0.58
C9orf3-215ENST00000478473 TOMM40LQ969M1 308 aa18.69■□□□□ 0.58
C9orf3-215ENST00000478473 ARL11Q969Q4 196 aa18.69■□□□□ 0.58
C9orf3-215ENST00000478473 VCX3BQ9H321 246 aa18.69■□□□□ 0.58
C9orf3-215ENST00000478473 GFOD1Q9NXC2 390 aa18.69■□□□□ 0.58
C9orf3-215ENST00000478473 UCHL1P09936 223 aa18.68■□□□□ 0.58
C9orf3-215ENST00000478473 FAM106CPP0CH98 169 aa18.68■□□□□ 0.58
C9orf3-215ENST00000478473 FUT3P21217 361 aa18.68■□□□□ 0.58
C9orf3-215ENST00000478473 CRHBPP24387 322 aa18.68■□□□□ 0.58
C9orf3-215ENST00000478473 VDAC2P45880 294 aaPredicted RBP18.68■□□□□ 0.58
C9orf3-215ENST00000478473 ZNF816Q0VGE8 651 aaPredicted RBP18.68■□□□□ 0.58
C9orf3-215ENST00000478473 FAM27D1Q5T7N8 215 aa18.68■□□□□ 0.58
C9orf3-215ENST00000478473 ZNF554Q86TJ5 538 aa18.68■□□□□ 0.58
C9orf3-215ENST00000478473 SELENOIQ9C0D9 397 aa18.68■□□□□ 0.58
C9orf3-215ENST00000478473 CST11Q9H112 138 aa18.68■□□□□ 0.58
C9orf3-215ENST00000478473 BANF2Q9H503 90 aa18.68■□□□□ 0.58
C9orf3-215ENST00000478473 MBNL3Q9NUK0 354 aaKnown RBP18.68■□□□□ 0.58
C9orf3-215ENST00000478473 ADARB2-AS1A8MUL3 147 aa18.67■□□□□ 0.58
C9orf3-215ENST00000478473 AIPO00170 330 aa18.67■□□□□ 0.58
C9orf3-215ENST00000478473 OPN1MWP04001 364 aa18.67■□□□□ 0.58
C9orf3-215ENST00000478473 OPN1MW2P0DN77 364 aa18.67■□□□□ 0.58
C9orf3-215ENST00000478473 OPN1MW3P0DN78 364 aa18.67■□□□□ 0.58
C9orf3-215ENST00000478473 SRMP19623 302 aa18.67■□□□□ 0.58
C9orf3-215ENST00000478473 DEFA6Q01524 100 aa18.67■□□□□ 0.58
C9orf3-215ENST00000478473 EMX1Q04741 257 aaPredicted RBP18.67■□□□□ 0.58
C9orf3-215ENST00000478473 EBI3Q14213 229 aa18.67■□□□□ 0.58
C9orf3-215ENST00000478473 MED22Q15528 200 aa18.67■□□□□ 0.58
C9orf3-215ENST00000478473 NDUFA11Q86Y39 141 aa18.67■□□□□ 0.58
C9orf3-215ENST00000478473 C11orf44Q8N8P7 122 aa18.67■□□□□ 0.58
C9orf3-215ENST00000478473 NEK7Q8TDX7 302 aa18.67■□□□□ 0.58
C9orf3-215ENST00000478473 ST6GALNAC6Q969X2 333 aa18.67■□□□□ 0.58
C9orf3-215ENST00000478473 TMED9Q9BVK6 235 aa18.67■□□□□ 0.58
C9orf3-215ENST00000478473 RAB9BQ9NP90 201 aa18.67■□□□□ 0.58
C9orf3-215ENST00000478473 PEX16Q9Y5Y5 336 aa18.67■□□□□ 0.58
C9orf3-215ENST00000478473 C12orf77C9JDV5 145 aa18.66■□□□□ 0.58
C9orf3-215ENST00000478473 CRTAPO75718 401 aaPredicted RBP18.66■□□□□ 0.58
C9orf3-215ENST00000478473 IGHV3-7P01780 117 aa18.66■□□□□ 0.58
C9orf3-215ENST00000478473 CD28P10747 220 aa18.66■□□□□ 0.58
C9orf3-215ENST00000478473 HSPA13P48723 471 aa18.66■□□□□ 0.58
C9orf3-215ENST00000478473 ZNF137PP52743 207 aa18.66■□□□□ 0.58
C9orf3-215ENST00000478473 CD83Q01151 205 aa18.66■□□□□ 0.58
C9orf3-215ENST00000478473 DIAPH2-AS1Q14236 149 aa18.66■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms