RNA–Protein interactions for RNA: ENST00000477928.1

SOX2-OT-208, SOX2 overlapping transcript, humanhuman

TSL 2 BASIC

Gene SOX2-OT, Length 902 nt, Biotype sense overlapping.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2-OT-208ENST00000477928 OR4P4Q8NGL7 312 aa11.15□□□□□ -0.62
SOX2-OT-208ENST00000477928 OR9G1Q8NH87 305 aa11.15□□□□□ -0.62
SOX2-OT-208ENST00000477928 SGCDQ92629 289 aa11.15□□□□□ -0.62
SOX2-OT-208ENST00000477928 Q96M66 194 aa11.15□□□□□ -0.62
SOX2-OT-208ENST00000477928 CITED1Q99966 193 aa11.15□□□□□ -0.62
SOX2-OT-208ENST00000477928 CALYQ9NYX4 217 aa11.15□□□□□ -0.62
SOX2-OT-208ENST00000477928 FBLN5Q9UBX5 448 aa11.15□□□□□ -0.62
SOX2-OT-208ENST00000477928 KIF25Q9UIL4 384 aa11.15□□□□□ -0.62
SOX2-OT-208ENST00000477928 AMMECR1Q9Y4X0 333 aaPredicted RBP11.15□□□□□ -0.62
SOX2-OT-208ENST00000477928 TOR1AO14656 332 aa11.14□□□□□ -0.63
SOX2-OT-208ENST00000477928 MGMTP16455 207 aa11.14□□□□□ -0.63
SOX2-OT-208ENST00000477928 FUT3P21217 361 aa11.14□□□□□ -0.63
SOX2-OT-208ENST00000477928 GLP1RP43220 463 aa11.14□□□□□ -0.63
SOX2-OT-208ENST00000477928 KIR2DS4P43632 304 aa11.14□□□□□ -0.63
SOX2-OT-208ENST00000477928 GP2P55259 537 aaKnown RBP11.14□□□□□ -0.63
SOX2-OT-208ENST00000477928 HLA-DRB5Q30154 266 aa11.14□□□□□ -0.63
SOX2-OT-208ENST00000477928 FBLN7Q53RD9 439 aa11.14□□□□□ -0.63
SOX2-OT-208ENST00000477928 ATAD3CQ5T2N8 411 aa11.14□□□□□ -0.63
SOX2-OT-208ENST00000477928 PRAMEF5Q5TYX0 476 aa11.14□□□□□ -0.63
SOX2-OT-208ENST00000477928 C8orf31Q8N9H6 132 aa11.14□□□□□ -0.63
SOX2-OT-208ENST00000477928 OR6M1Q8NGM8 313 aa11.14□□□□□ -0.63
SOX2-OT-208ENST00000477928 KCNG3Q8TAE7 436 aa11.14□□□□□ -0.63
SOX2-OT-208ENST00000477928 FCGR1BQ92637 280 aa11.14□□□□□ -0.63
SOX2-OT-208ENST00000477928 KIRREL1Q96J84 757 aa11.14□□□□□ -0.63
SOX2-OT-208ENST00000477928 CYYR1Q96J86 154 aa11.14□□□□□ -0.63
SOX2-OT-208ENST00000477928 NPFFR1Q9GZQ6 430 aa11.14□□□□□ -0.63
SOX2-OT-208ENST00000477928 PPIL3Q9H2H8 161 aaKnown RBP11.14□□□□□ -0.63
SOX2-OT-208ENST00000477928 ZNF696Q9H7X3 374 aa11.14□□□□□ -0.63
SOX2-OT-208ENST00000477928 IDI2-AS1Q9NZ38 188 aa11.14□□□□□ -0.63
SOX2-OT-208ENST00000477928 TCF19Q9Y242 345 aa11.14□□□□□ -0.63
SOX2-OT-208ENST00000477928 HSPB6O14558 160 aa11.13□□□□□ -0.63
SOX2-OT-208ENST00000477928 SLC22A1O15245 554 aa11.13□□□□□ -0.63
SOX2-OT-208ENST00000477928 KCNAB3O43448 404 aa11.13□□□□□ -0.63
SOX2-OT-208ENST00000477928 CRTAPO75718 401 aaPredicted RBP11.13□□□□□ -0.63
SOX2-OT-208ENST00000477928 HTR2CP28335 458 aa11.13□□□□□ -0.63
SOX2-OT-208ENST00000477928 BRS3P32247 399 aa11.13□□□□□ -0.63
SOX2-OT-208ENST00000477928 FAM189A2Q15884 450 aa11.13□□□□□ -0.63
SOX2-OT-208ENST00000477928 SSX2Q16385 188 aa11.13□□□□□ -0.63
SOX2-OT-208ENST00000477928 C6orf183Q5T699 404 aa11.13□□□□□ -0.63
SOX2-OT-208ENST00000477928 CCBE1Q6UXH8 406 aaPredicted RBP11.13□□□□□ -0.63
SOX2-OT-208ENST00000477928 TREML4Q6UXN2 200 aa11.13□□□□□ -0.63
SOX2-OT-208ENST00000477928 ZNF497Q6ZNH5 498 aa11.13□□□□□ -0.63
SOX2-OT-208ENST00000477928 TMEM219Q86XT9 240 aa11.13□□□□□ -0.63
SOX2-OT-208ENST00000477928 OR13A1Q8NGR1 328 aa11.13□□□□□ -0.63
SOX2-OT-208ENST00000477928 NDNFQ8TB73 568 aa11.13□□□□□ -0.63
SOX2-OT-208ENST00000477928 PLPPR1Q8TBJ4 325 aa11.13□□□□□ -0.63
SOX2-OT-208ENST00000477928 SELENOIQ9C0D9 397 aa11.13□□□□□ -0.63
SOX2-OT-208ENST00000477928 MMP28Q9H239 520 aa11.13□□□□□ -0.63
SOX2-OT-208ENST00000477928 LRRC42Q9Y546 428 aa11.13□□□□□ -0.63
SOX2-OT-208ENST00000477928 A0A1W2PP11 408 aa11.12□□□□□ -0.63
SOX2-OT-208ENST00000477928 BUB1B-PAK6H3BSN5 160 aa11.12□□□□□ -0.63
SOX2-OT-208ENST00000477928 WIPF1O43516 503 aa11.12□□□□□ -0.63
SOX2-OT-208ENST00000477928 MT-ND4P03905 459 aa11.12□□□□□ -0.63
SOX2-OT-208ENST00000477928 EMX1Q04741 257 aaPredicted RBP11.12□□□□□ -0.63
SOX2-OT-208ENST00000477928 HABP2Q14520 560 aaPredicted RBP11.12□□□□□ -0.63
SOX2-OT-208ENST00000477928 RAB12Q6IQ22 244 aa11.12□□□□□ -0.63
SOX2-OT-208ENST00000477928 CD200R1LQ6Q8B3 271 aa11.12□□□□□ -0.63
SOX2-OT-208ENST00000477928 TMEM91Q6ZNR0 172 aa11.12□□□□□ -0.63
SOX2-OT-208ENST00000477928 OR2W3Q7Z3T1 314 aa11.12□□□□□ -0.63
SOX2-OT-208ENST00000477928 OR4C13Q8NGP0 309 aa11.12□□□□□ -0.63
SOX2-OT-208ENST00000477928 AKR1E2Q96JD6 320 aa11.12□□□□□ -0.63
SOX2-OT-208ENST00000477928 TM2D1Q9BX74 207 aa11.12□□□□□ -0.63
SOX2-OT-208ENST00000477928 NDUFB11Q9NX14 153 aa11.12□□□□□ -0.63
SOX2-OT-208ENST00000477928 TRAV39A0A0B4J263 110 aa11.11□□□□□ -0.63
SOX2-OT-208ENST00000477928 A6NDX4 124 aa11.11□□□□□ -0.63
SOX2-OT-208ENST00000477928 TMEM14DPA8MWL7 114 aa11.11□□□□□ -0.63
SOX2-OT-208ENST00000477928 J3QR06 171 aa11.11□□□□□ -0.63
SOX2-OT-208ENST00000477928 AIPO00170 330 aa11.11□□□□□ -0.63
SOX2-OT-208ENST00000477928 F2RL2O00254 374 aa11.11□□□□□ -0.63
SOX2-OT-208ENST00000477928 SLC17A2O00624 439 aa11.11□□□□□ -0.63
SOX2-OT-208ENST00000477928 PDCD5O14737 125 aa11.11□□□□□ -0.63
SOX2-OT-208ENST00000477928 PDCD6O75340 191 aa11.11□□□□□ -0.63
SOX2-OT-208ENST00000477928 TSPAN15O95858 294 aa11.11□□□□□ -0.63
SOX2-OT-208ENST00000477928 MNDAP41218 407 aa11.11□□□□□ -0.63
SOX2-OT-208ENST00000477928 MAP2K4P45985 399 aa11.11□□□□□ -0.63
SOX2-OT-208ENST00000477928 RPS25P62851 125 aaKnown RBP11.11□□□□□ -0.63
SOX2-OT-208ENST00000477928 INSL4Q14641 139 aa11.11□□□□□ -0.63
SOX2-OT-208ENST00000477928 FAM27D1Q5T7N8 215 aa11.11□□□□□ -0.63
SOX2-OT-208ENST00000477928 UBE2UQ5VVX9 321 aa11.11□□□□□ -0.63
SOX2-OT-208ENST00000477928 LINC00311Q8N616 119 aa11.11□□□□□ -0.63
SOX2-OT-208ENST00000477928 C11orf44Q8N8P7 122 aa11.11□□□□□ -0.63
SOX2-OT-208ENST00000477928 TMEM104Q8NE00 496 aa11.11□□□□□ -0.63
SOX2-OT-208ENST00000477928 MRGPRDQ8TDS7 321 aa11.11□□□□□ -0.63
SOX2-OT-208ENST00000477928 NEK7Q8TDX7 302 aa11.11□□□□□ -0.63
SOX2-OT-208ENST00000477928 TMEM203Q969S6 136 aa11.11□□□□□ -0.63
SOX2-OT-208ENST00000477928 NEDD4LQ96PU5 975 aa11.11□□□□□ -0.63
SOX2-OT-208ENST00000477928 URM1Q9BTM9 101 aaKnown RBP11.11□□□□□ -0.63
SOX2-OT-208ENST00000477928 TMEM59Q9BXS4 323 aa11.11□□□□□ -0.63
SOX2-OT-208ENST00000477928 ZNF286AQ9HBT8 521 aa11.11□□□□□ -0.63
SOX2-OT-208ENST00000477928 ETAA1Q9NY74 926 aa11.11□□□□□ -0.63
SOX2-OT-208ENST00000477928 RRP15Q9Y3B9 282 aaKnown RBP11.11□□□□□ -0.63
SOX2-OT-208ENST00000477928 HILPDAQ9Y5L2 63 aa11.11□□□□□ -0.63
SOX2-OT-208ENST00000477928 PEX16Q9Y5Y5 336 aa11.11□□□□□ -0.63
SOX2-OT-208ENST00000477928 TRAV1-2A0A0B4J238 106 aa11.1□□□□□ -0.63
SOX2-OT-208ENST00000477928 TRDV1A0A1B0GX56 115 aa11.1□□□□□ -0.63
SOX2-OT-208ENST00000477928 LY6LH3BQJ8 138 aa11.1□□□□□ -0.63
SOX2-OT-208ENST00000477928 C15orf65H3BRN8 121 aa11.1□□□□□ -0.63
SOX2-OT-208ENST00000477928 CCRL2O00421 344 aa11.1□□□□□ -0.63
SOX2-OT-208ENST00000477928 TIMM23O14925 209 aa11.1□□□□□ -0.63
SOX2-OT-208ENST00000477928 SPINT2O43291 252 aa11.1□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms