RNA–Protein interactions for RNA: ENST00000477360.2

CLCNKA-205, Transcript of chloride voltage-gated channel Ka, humanhuman

TSL 5

Gene CLCNKA, Length 400 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCNKA-205ENST00000477360 RAB18Q9NP72 206 aa10.05□□□□□ -0.8
CLCNKA-205ENST00000477360 VPREB3Q9UKI3 123 aa10.05□□□□□ -0.8
CLCNKA-205ENST00000477360 DNHD1Q96M86 4753 aa10.05□□□□□ -0.8
CLCNKA-205ENST00000477360 MEIKINA0A087WXM9 373 aa10.04□□□□□ -0.8
CLCNKA-205ENST00000477360 IGHV2-26A0A0B4J1V2 119 aa10.04□□□□□ -0.8
CLCNKA-205ENST00000477360 MDFIC2A0A1B0GVS7 189 aa10.04□□□□□ -0.8
CLCNKA-205ENST00000477360 TMEM14DPA8MWL7 114 aa10.04□□□□□ -0.8
CLCNKA-205ENST00000477360 OOSP1A8MZH6 123 aa10.04□□□□□ -0.8
CLCNKA-205ENST00000477360 H3BMQ9 156 aa10.04□□□□□ -0.8
CLCNKA-205ENST00000477360 LDLRAD4O15165 306 aa10.04□□□□□ -0.8
CLCNKA-205ENST00000477360 ORC5O43913 435 aa10.04□□□□□ -0.8
CLCNKA-205ENST00000477360 NOL3O60936 208 aaKnown RBP10.04□□□□□ -0.8
CLCNKA-205ENST00000477360 CLEC2LP0C7M8 214 aa10.04□□□□□ -0.8
CLCNKA-205ENST00000477360 SERPINB10P48595 397 aa10.04□□□□□ -0.8
CLCNKA-205ENST00000477360 QRFPP83859 136 aa10.04□□□□□ -0.8
CLCNKA-205ENST00000477360 KLRD1Q13241 179 aa10.04□□□□□ -0.8
CLCNKA-205ENST00000477360 ATXN7L3Q14CW9 347 aaPredicted RBP10.04□□□□□ -0.8
CLCNKA-205ENST00000477360 RAB11BQ15907 218 aa10.04□□□□□ -0.8
CLCNKA-205ENST00000477360 TAF9Q16594 264 aa10.04□□□□□ -0.8
CLCNKA-205ENST00000477360 C17orf58Q2M2W7 97 aa10.04□□□□□ -0.8
CLCNKA-205ENST00000477360 LRRC75BQ2VPJ9 315 aa10.04□□□□□ -0.8
CLCNKA-205ENST00000477360 C12orf54Q6X4T0 127 aa10.04□□□□□ -0.8
CLCNKA-205ENST00000477360 ZNF497Q6ZNH5 498 aa10.04□□□□□ -0.8
CLCNKA-205ENST00000477360 PNKDQ8N490 385 aa10.04□□□□□ -0.8
CLCNKA-205ENST00000477360 TPRX1Q8N7U7 411 aa10.04□□□□□ -0.8
CLCNKA-205ENST00000477360 C8orf31Q8N9H6 132 aa10.04□□□□□ -0.8
CLCNKA-205ENST00000477360 KCTD12Q96CX2 325 aaKnown RBP10.04□□□□□ -0.8
CLCNKA-205ENST00000477360 TM2D1Q9BX74 207 aa10.04□□□□□ -0.8
CLCNKA-205ENST00000477360 CHIAQ9BZP6 476 aa10.04□□□□□ -0.8
CLCNKA-205ENST00000477360 DCSTAMPQ9H295 470 aa10.04□□□□□ -0.8
CLCNKA-205ENST00000477360 BATF3Q9NR55 127 aa10.04□□□□□ -0.8
CLCNKA-205ENST00000477360 KIF25Q9UIL4 384 aa10.04□□□□□ -0.8
CLCNKA-205ENST00000477360 SOX21Q9Y651 276 aaPredicted RBP10.04□□□□□ -0.8
CLCNKA-205ENST00000477360 ANK2Q01484 3957 aa10.04□□□□□ -0.8
CLCNKA-205ENST00000477360 DPPA5A6NC42 116 aa10.03□□□□□ -0.8
CLCNKA-205ENST00000477360 MCRIP1C9JLW8 97 aa10.03□□□□□ -0.8
CLCNKA-205ENST00000477360 PDCD6O75340 191 aa10.03□□□□□ -0.8
CLCNKA-205ENST00000477360 CRTAPO75718 401 aaPredicted RBP10.03□□□□□ -0.8
CLCNKA-205ENST00000477360 IGLV1-47P01700 117 aa10.03□□□□□ -0.8
CLCNKA-205ENST00000477360 IGHV4-59P01825 116 aa10.03□□□□□ -0.8
CLCNKA-205ENST00000477360 MT-ND4P03905 459 aa10.03□□□□□ -0.8
CLCNKA-205ENST00000477360 CRYBA1P05813 215 aa10.03□□□□□ -0.8
CLCNKA-205ENST00000477360 VSIG8P0DPA2 414 aa10.03□□□□□ -0.8
CLCNKA-205ENST00000477360 CDK2P24941 298 aa10.03□□□□□ -0.8
CLCNKA-205ENST00000477360 HTR1DP28221 377 aa10.03□□□□□ -0.8
CLCNKA-205ENST00000477360 CEACAM3P40198 252 aa10.03□□□□□ -0.8
CLCNKA-205ENST00000477360 PRRX1P54821 245 aa10.03□□□□□ -0.8
CLCNKA-205ENST00000477360 RPS27AP62979 156 aaKnown RBP10.03□□□□□ -0.8
CLCNKA-205ENST00000477360 SRSF2Q01130 221 aaKnown RBP10.03□□□□□ -0.8
CLCNKA-205ENST00000477360 MXD1Q05195 221 aa10.03□□□□□ -0.8
CLCNKA-205ENST00000477360 RAB12Q6IQ22 244 aa10.03□□□□□ -0.8
CLCNKA-205ENST00000477360 ZNF782Q6ZMW2 699 aaPredicted RBP10.03□□□□□ -0.8
CLCNKA-205ENST00000477360 PDZD9Q8IXQ8 264 aa10.03□□□□□ -0.8
CLCNKA-205ENST00000477360 TMEM104Q8NE00 496 aa10.03□□□□□ -0.8
CLCNKA-205ENST00000477360 OR4F5Q8NH21 305 aa10.03□□□□□ -0.8
CLCNKA-205ENST00000477360 FAM3DQ96BQ1 224 aa10.03□□□□□ -0.8
CLCNKA-205ENST00000477360 DGCR14Q96DF8 476 aaKnown RBP10.03□□□□□ -0.8
CLCNKA-205ENST00000477360 NKX3-1Q99801 234 aaPredicted RBP10.03□□□□□ -0.8
CLCNKA-205ENST00000477360 SELENOIQ9C0D9 397 aa10.03□□□□□ -0.8
CLCNKA-205ENST00000477360 CALYQ9NYX4 217 aa10.03□□□□□ -0.8
CLCNKA-205ENST00000477360 RSL24D1Q9UHA3 163 aaKnown RBP10.03□□□□□ -0.8
CLCNKA-205ENST00000477360 PITPNC1Q9UKF7 332 aa10.03□□□□□ -0.8
CLCNKA-205ENST00000477360 A0A1W2PP11 408 aa10.02□□□□□ -0.81
CLCNKA-205ENST00000477360 FAM181BA6NEQ2 426 aa10.02□□□□□ -0.81
CLCNKA-205ENST00000477360 A6NHS1 94 aa10.02□□□□□ -0.81
CLCNKA-205ENST00000477360 GPR137BO60478 399 aa10.02□□□□□ -0.81
CLCNKA-205ENST00000477360 ARG1P05089 322 aa10.02□□□□□ -0.81
CLCNKA-205ENST00000477360 ARSBP15848 533 aa10.02□□□□□ -0.81
CLCNKA-205ENST00000477360 RAB6AP20340 208 aa10.02□□□□□ -0.81
CLCNKA-205ENST00000477360 COX7A1P24310 79 aa10.02□□□□□ -0.81
CLCNKA-205ENST00000477360 ARHGDIBP52566 201 aa10.02□□□□□ -0.81
CLCNKA-205ENST00000477360 UNC119Q13432 240 aa10.02□□□□□ -0.81
CLCNKA-205ENST00000477360 SPCS2Q15005 226 aa10.02□□□□□ -0.81
CLCNKA-205ENST00000477360 C2orf76Q3KRA6 126 aa10.02□□□□□ -0.81
CLCNKA-205ENST00000477360 C6orf183Q5T699 404 aa10.02□□□□□ -0.81
CLCNKA-205ENST00000477360 HES5Q5TA89 166 aa10.02□□□□□ -0.81
CLCNKA-205ENST00000477360 CCDC144NLQ6NUI1 221 aa10.02□□□□□ -0.81
CLCNKA-205ENST00000477360 C11orf88Q6PI97 169 aa10.02□□□□□ -0.81
CLCNKA-205ENST00000477360 ABHD12Q8N2K0 398 aa10.02□□□□□ -0.81
CLCNKA-205ENST00000477360 FAM89BQ8N5H3 189 aa10.02□□□□□ -0.81
CLCNKA-205ENST00000477360 OR51D1Q8NGF3 324 aa10.02□□□□□ -0.81
CLCNKA-205ENST00000477360 OR9G1Q8NH87 305 aa10.02□□□□□ -0.81
CLCNKA-205ENST00000477360 NDNFQ8TB73 568 aa10.02□□□□□ -0.81
CLCNKA-205ENST00000477360 PLPPR1Q8TBJ4 325 aa10.02□□□□□ -0.81
CLCNKA-205ENST00000477360 DYNC2LI1Q8TCX1 351 aa10.02□□□□□ -0.81
CLCNKA-205ENST00000477360 KIRREL1Q96J84 757 aa10.02□□□□□ -0.81
CLCNKA-205ENST00000477360 URM1Q9BTM9 101 aaKnown RBP10.02□□□□□ -0.81
CLCNKA-205ENST00000477360 TMEM59Q9BXS4 323 aa10.02□□□□□ -0.81
CLCNKA-205ENST00000477360 RIMS4Q9H426 269 aaPredicted RBP10.02□□□□□ -0.81
CLCNKA-205ENST00000477360 RANBP3Q9H6Z4 567 aaPredicted RBP10.02□□□□□ -0.81
CLCNKA-205ENST00000477360 LIN7BQ9HAP6 207 aa10.02□□□□□ -0.81
CLCNKA-205ENST00000477360 ABRACLQ9P1F3 81 aa10.02□□□□□ -0.81
CLCNKA-205ENST00000477360 DPM3Q9P2X0 92 aa10.02□□□□□ -0.81
CLCNKA-205ENST00000477360 DAPK2Q9UIK4 370 aa10.02□□□□□ -0.81
CLCNKA-205ENST00000477360 HSF4Q9ULV5 492 aa10.02□□□□□ -0.81
CLCNKA-205ENST00000477360 PEX16Q9Y5Y5 336 aa10.02□□□□□ -0.81
CLCNKA-205ENST00000477360 LEUTXA8MZ59 168 aa10.01□□□□□ -0.81
CLCNKA-205ENST00000477360 F2RL2O00254 374 aa10.01□□□□□ -0.81
CLCNKA-205ENST00000477360 TSPAN9O75954 239 aa10.01□□□□□ -0.81
CLCNKA-205ENST00000477360 SLC2A2P11168 524 aaPredicted RBP10.01□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms