RNA–Protein interactions for RNA: ENST00000476342.1

HOXB3-208, Transcript of homeobox B3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXB3, Length 1,420 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXB3-208ENST00000476342 RAB2BQ8WUD1 216 aa24.13■■□□□ 1.45
HOXB3-208ENST00000476342 RAB3CQ96E17 227 aa24.13■■□□□ 1.45
HOXB3-208ENST00000476342 PECRQ9BY49 303 aa24.13■■□□□ 1.45
HOXB3-208ENST00000476342 TMEM133Q9H2Q1 129 aa24.13■■□□□ 1.45
HOXB3-208ENST00000476342 RAB9BQ9NP90 201 aa24.13■■□□□ 1.45
HOXB3-208ENST00000476342 SCGNO76038 276 aa24.12■■□□□ 1.45
HOXB3-208ENST00000476342 SSTR5P35346 364 aa24.12■■□□□ 1.45
HOXB3-208ENST00000476342 RBMS3Q6XE24 437 aaKnown RBP24.12■■□□□ 1.45
HOXB3-208ENST00000476342 LINC00574Q9H8X3 128 aa24.12■■□□□ 1.45
HOXB3-208ENST00000476342 SPATA2Q9UM82 520 aa24.12■■□□□ 1.45
HOXB3-208ENST00000476342 A0A1W2PRD5 423 aa24.11■■□□□ 1.45
HOXB3-208ENST00000476342 A0A1W2PRF3 423 aa24.11■■□□□ 1.45
HOXB3-208ENST00000476342 A0A1W2PRM7 423 aa24.11■■□□□ 1.45
HOXB3-208ENST00000476342 RAB27BO00194 218 aa24.11■■□□□ 1.45
HOXB3-208ENST00000476342 ORC5O43913 435 aa24.11■■□□□ 1.45
HOXB3-208ENST00000476342 NOL3O60936 208 aaKnown RBP24.11■■□□□ 1.45
HOXB3-208ENST00000476342 MMP23AO75900 390 aa24.11■■□□□ 1.45
HOXB3-208ENST00000476342 MIDNQ504T8 468 aa24.11■■□□□ 1.45
HOXB3-208ENST00000476342 PIP4P2Q8N4L2 257 aa24.11■■□□□ 1.45
HOXB3-208ENST00000476342 OR10A7Q8NGE5 316 aa24.11■■□□□ 1.45
HOXB3-208ENST00000476342 MRPL30Q8TCC3 161 aaKnown RBP24.11■■□□□ 1.45
HOXB3-208ENST00000476342 BCL7BQ9BQE9 202 aa24.11■■□□□ 1.45
HOXB3-208ENST00000476342 DCSTAMPQ9H295 470 aa24.11■■□□□ 1.45
HOXB3-208ENST00000476342 RIMS4Q9H426 269 aaPredicted RBP24.11■■□□□ 1.45
HOXB3-208ENST00000476342 RHBDL2Q9NX52 303 aa24.11■■□□□ 1.45
HOXB3-208ENST00000476342 IDI2-AS1Q9NZ38 188 aa24.11■■□□□ 1.45
HOXB3-208ENST00000476342 NPIPB11E5RHQ5 1161 aa24.1■■□□□ 1.45
HOXB3-208ENST00000476342 TCF21O43680 179 aa24.1■■□□□ 1.45
HOXB3-208ENST00000476342 TMBIM6P55061 237 aa24.1■■□□□ 1.45
HOXB3-208ENST00000476342 MOGAT2Q3SYC2 334 aa24.1■■□□□ 1.45
HOXB3-208ENST00000476342 PLAC9Q5JTB6 97 aa24.1■■□□□ 1.45
HOXB3-208ENST00000476342 PRIMA1Q86XR5 153 aa24.1■■□□□ 1.45
HOXB3-208ENST00000476342 ARL11Q969Q4 196 aa24.1■■□□□ 1.45
HOXB3-208ENST00000476342 KCTD12Q96CX2 325 aaKnown RBP24.1■■□□□ 1.45
HOXB3-208ENST00000476342 KIRREL1Q96J84 757 aa24.1■■□□□ 1.45
HOXB3-208ENST00000476342 CYYR1Q96J86 154 aa24.1■■□□□ 1.45
HOXB3-208ENST00000476342 CHMP1AQ9HD42 196 aaPredicted RBP24.1■■□□□ 1.45
HOXB3-208ENST00000476342 AK3Q9UIJ7 227 aa24.1■■□□□ 1.45
HOXB3-208ENST00000476342 A0A0A6YYJ9 748 aa24.1■■□□□ 1.45
HOXB3-208ENST00000476342 MEIOCA2RUB1 952 aa24.1■■□□□ 1.45
HOXB3-208ENST00000476342 SAA4P35542 130 aa24.1■■□□□ 1.45
HOXB3-208ENST00000476342 LGALS4P56470 323 aa24.1■■□□□ 1.45
HOXB3-208ENST00000476342 ARL6IP1Q15041 203 aa24.1■■□□□ 1.45
HOXB3-208ENST00000476342 TUSC1Q2TAM9 212 aa24.1■■□□□ 1.45
HOXB3-208ENST00000476342 OR11H6Q8NGC7 330 aa24.1■■□□□ 1.45
HOXB3-208ENST00000476342 OR5H6Q8NGV6 325 aa24.1■■□□□ 1.45
HOXB3-208ENST00000476342 RFESDQ8TAC1 157 aa24.1■■□□□ 1.45
HOXB3-208ENST00000476342 PHF21AQ96BD5 680 aa24.1■■□□□ 1.45
HOXB3-208ENST00000476342 CLEC7AQ9BXN2 247 aa24.1■■□□□ 1.45
HOXB3-208ENST00000476342 MBNL3Q9NUK0 354 aaKnown RBP24.1■■□□□ 1.45
HOXB3-208ENST00000476342 KCNIP1Q9NZI2 227 aa24.1■■□□□ 1.45
HOXB3-208ENST00000476342 FAM96BQ9Y3D0 163 aa24.1■■□□□ 1.45
HOXB3-208ENST00000476342 IGHV2-26A0A0B4J1V2 119 aa24.09■■□□□ 1.45
HOXB3-208ENST00000476342 NFYBP25208 207 aa24.09■■□□□ 1.45
HOXB3-208ENST00000476342 RORCP51449 518 aa24.09■■□□□ 1.45
HOXB3-208ENST00000476342 MRPS15P82914 257 aaKnown RBP24.09■■□□□ 1.45
HOXB3-208ENST00000476342 ZNF554Q86TJ5 538 aa24.09■■□□□ 1.45
HOXB3-208ENST00000476342 RTN4RL2Q86UN3 420 aa24.09■■□□□ 1.45
HOXB3-208ENST00000476342 NDNFQ8TB73 568 aa24.09■■□□□ 1.45
HOXB3-208ENST00000476342 JMJD8Q96S16 334 aa24.09■■□□□ 1.45
HOXB3-208ENST00000476342 SOX21Q9Y651 276 aaPredicted RBP24.09■■□□□ 1.45
HOXB3-208ENST00000476342 A0A0U1RQK1 487 aa24.08■■□□□ 1.44
HOXB3-208ENST00000476342 SPINT2O43291 252 aa24.08■■□□□ 1.44
HOXB3-208ENST00000476342 NAPSAO96009 420 aa24.08■■□□□ 1.44
HOXB3-208ENST00000476342 ARG1P05089 322 aa24.08■■□□□ 1.44
HOXB3-208ENST00000476342 HIST1H1DP16402 221 aaKnown RBP24.08■■□□□ 1.44
HOXB3-208ENST00000476342 RCC1P18754 421 aaPredicted RBP24.08■■□□□ 1.44
HOXB3-208ENST00000476342 GDNFP39905 211 aa24.08■■□□□ 1.44
HOXB3-208ENST00000476342 DEFB112Q30KQ8 113 aa24.08■■□□□ 1.44
HOXB3-208ENST00000476342 ZNF626Q68DY1 528 aa24.08■■□□□ 1.44
HOXB3-208ENST00000476342 MOB1BQ7L9L4 216 aa24.08■■□□□ 1.44
HOXB3-208ENST00000476342 SIGLECL1Q8N7X8 197 aa24.08■■□□□ 1.44
HOXB3-208ENST00000476342 CMSS1Q9BQ75 279 aaKnown RBP24.08■■□□□ 1.44
HOXB3-208ENST00000476342 C12orf4Q9NQ89 552 aa24.08■■□□□ 1.44
HOXB3-208ENST00000476342 A0A087X0M5 115 aa24.07■■□□□ 1.44
HOXB3-208ENST00000476342 A0A1B0GX30 115 aa24.07■■□□□ 1.44
HOXB3-208ENST00000476342 SERPINE3A8MV23 424 aa24.07■■□□□ 1.44
HOXB3-208ENST00000476342 C12orf77C9JDV5 145 aa24.07■■□□□ 1.44
HOXB3-208ENST00000476342 C15orf65H3BRN8 121 aa24.07■■□□□ 1.44
HOXB3-208ENST00000476342 CD34P28906 385 aa24.07■■□□□ 1.44
HOXB3-208ENST00000476342 DYNC1I2Q13409 638 aaKnown RBP24.07■■□□□ 1.44
HOXB3-208ENST00000476342 ABHD12Q8N2K0 398 aa24.07■■□□□ 1.44
HOXB3-208ENST00000476342 ZDHHC16Q969W1 377 aa24.07■■□□□ 1.44
HOXB3-208ENST00000476342 ZNF48Q96MX3 618 aaPredicted RBP24.07■■□□□ 1.44
HOXB3-208ENST00000476342 A0A075B6Q4 140 aa24.06■■□□□ 1.44
HOXB3-208ENST00000476342 ODF3BA8MYP8 253 aa24.06■■□□□ 1.44
HOXB3-208ENST00000476342 MFNGO00587 321 aa24.06■■□□□ 1.44
HOXB3-208ENST00000476342 FBP1P09467 338 aa24.06■■□□□ 1.44
HOXB3-208ENST00000476342 GNB3P16520 340 aa24.06■■□□□ 1.44
HOXB3-208ENST00000476342 HILS1P60008 231 aa24.06■■□□□ 1.44
HOXB3-208ENST00000476342 LTC4SQ16873 150 aa24.06■■□□□ 1.44
HOXB3-208ENST00000476342 SLC25A38Q96DW6 304 aa24.06■■□□□ 1.44
HOXB3-208ENST00000476342 TBL2Q9Y4P3 447 aaKnown RBP24.06■■□□□ 1.44
HOXB3-208ENST00000476342 TRBV6-6A0A0A6YYG2 114 aa24.05■■□□□ 1.44
HOXB3-208ENST00000476342 FAM172BPA6NC97 362 aa24.05■■□□□ 1.44
HOXB3-208ENST00000476342 POM121CA8CG34 1229 aa24.05■■□□□ 1.44
HOXB3-208ENST00000476342 CD3GP09693 182 aa24.05■■□□□ 1.44
HOXB3-208ENST00000476342 TMEM30BQ3MIR4 351 aa24.05■■□□□ 1.44
HOXB3-208ENST00000476342 BAIAP2L2Q6UXY1 529 aa24.05■■□□□ 1.44
HOXB3-208ENST00000476342 PRR18Q8N4B5 295 aa24.05■■□□□ 1.44
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms