RNA–Protein interactions for RNA: ENST00000476267.1

MRPL55-228, Transcript of mitochondrial ribosomal protein L55, humanhuman

TSL 3

Gene MRPL55, Length 169 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55-228ENST00000476267 TSEN15Q8WW01 171 aaKnown RBP10.29□□□□□ -0.76
MRPL55-228ENST00000476267 CPNE2Q96FN4 548 aaPredicted RBP10.29□□□□□ -0.76
MRPL55-228ENST00000476267 MRPL48Q96GC5 212 aaKnown RBP10.29□□□□□ -0.76
MRPL55-228ENST00000476267 DCLRE1BQ9H816 532 aa10.29□□□□□ -0.76
MRPL55-228ENST00000476267 TAS2R4Q9NYW5 299 aa10.29□□□□□ -0.76
MRPL55-228ENST00000476267 RYR2Q92736 4967 aa10.29□□□□□ -0.76
MRPL55-228ENST00000476267 DYNC2H1Q8NCM8 4307 aaKnown RBP10.28□□□□□ -0.76
MRPL55-228ENST00000476267 NUDT19A8MXV4 375 aa10.28□□□□□ -0.76
MRPL55-228ENST00000476267 AP4M1O00189 453 aa10.28□□□□□ -0.76
MRPL55-228ENST00000476267 CDRT1O95170 752 aa10.28□□□□□ -0.76
MRPL55-228ENST00000476267 FADS2O95864 444 aaKnown RBP10.28□□□□□ -0.76
MRPL55-228ENST00000476267 GAPDHP04406 335 aaKnown RBP10.28□□□□□ -0.76
MRPL55-228ENST00000476267 CDX1P47902 265 aaPredicted RBP10.28□□□□□ -0.76
MRPL55-228ENST00000476267 REG1BP48304 166 aa10.28□□□□□ -0.76
MRPL55-228ENST00000476267 DGCR2P98153 550 aa10.28□□□□□ -0.76
MRPL55-228ENST00000476267 DCTN2Q13561 401 aaKnown RBP10.28□□□□□ -0.76
MRPL55-228ENST00000476267 RSU1Q15404 277 aa10.28□□□□□ -0.76
MRPL55-228ENST00000476267 KLHL22Q53GT1 634 aa10.28□□□□□ -0.76
MRPL55-228ENST00000476267 NKAPLQ5M9Q1 402 aa10.28□□□□□ -0.76
MRPL55-228ENST00000476267 TEX38Q6PEX7 206 aa10.28□□□□□ -0.76
MRPL55-228ENST00000476267 CBR4Q8N4T8 237 aa10.28□□□□□ -0.76
MRPL55-228ENST00000476267 ZNF439Q8NDP4 499 aa10.28□□□□□ -0.76
MRPL55-228ENST00000476267 OR52I1Q8NGK6 324 aa10.28□□□□□ -0.76
MRPL55-228ENST00000476267 APH1BQ8WW43 257 aa10.28□□□□□ -0.76
MRPL55-228ENST00000476267 RTN4IP1Q8WWV3 396 aaPredicted RBP10.28□□□□□ -0.76
MRPL55-228ENST00000476267 MYCBPQ99417 103 aaPredicted RBP10.28□□□□□ -0.76
MRPL55-228ENST00000476267 AMBNQ9NP70 447 aa10.28□□□□□ -0.76
MRPL55-228ENST00000476267 ST3GAL6Q9Y274 331 aa10.28□□□□□ -0.76
MRPL55-228ENST00000476267 ORC6Q9Y5N6 252 aa10.28□□□□□ -0.76
MRPL55-228ENST00000476267 GMPPBQ9Y5P6 360 aa10.28□□□□□ -0.76
MRPL55-228ENST00000476267 IGHV3-72A0A0B4J1Y9 119 aa10.27□□□□□ -0.77
MRPL55-228ENST00000476267 CCL24O00175 119 aa10.27□□□□□ -0.77
MRPL55-228ENST00000476267 CCRL2O00421 344 aa10.27□□□□□ -0.77
MRPL55-228ENST00000476267 GEMIN2O14893 280 aaKnown RBP10.27□□□□□ -0.77
MRPL55-228ENST00000476267 HTR3BO95264 441 aa10.27□□□□□ -0.77
MRPL55-228ENST00000476267 GZMHP20718 246 aa10.27□□□□□ -0.77
MRPL55-228ENST00000476267 CD1BP29016 333 aa10.27□□□□□ -0.77
MRPL55-228ENST00000476267 VHLP40337 213 aa10.27□□□□□ -0.77
MRPL55-228ENST00000476267 SOX2P48431 317 aa10.27□□□□□ -0.77
MRPL55-228ENST00000476267 LUMP51884 338 aaPredicted RBP10.27□□□□□ -0.77
MRPL55-228ENST00000476267 ZNF137PP52743 207 aa10.27□□□□□ -0.77
MRPL55-228ENST00000476267 FOXE3Q13461 319 aa10.27□□□□□ -0.77
MRPL55-228ENST00000476267 FHL3Q13643 280 aa10.27□□□□□ -0.77
MRPL55-228ENST00000476267 PNLIPRP3Q17RR3 467 aa10.27□□□□□ -0.77
MRPL55-228ENST00000476267 DEFB136Q30KP8 78 aa10.27□□□□□ -0.77
MRPL55-228ENST00000476267 Q3ZCU0 254 aa10.27□□□□□ -0.77
MRPL55-228ENST00000476267 LCNL1Q6ZST4 164 aa10.27□□□□□ -0.77
MRPL55-228ENST00000476267 MOB3BQ86TA1 216 aa10.27□□□□□ -0.77
MRPL55-228ENST00000476267 LINC00596Q86U02 117 aa10.27□□□□□ -0.77
MRPL55-228ENST00000476267 SATL1Q86VE3 508 aa10.27□□□□□ -0.77
MRPL55-228ENST00000476267 FAM71E2Q8N5Q1 922 aa10.27□□□□□ -0.77
MRPL55-228ENST00000476267 MYOZ3Q8TDC0 251 aa10.27□□□□□ -0.77
MRPL55-228ENST00000476267 TMEM106AQ96A25 262 aa10.27□□□□□ -0.77
MRPL55-228ENST00000476267 RBMXL1Q96E39 390 aaKnown RBP10.27□□□□□ -0.77
MRPL55-228ENST00000476267 GPER1Q99527 375 aa10.27□□□□□ -0.77
MRPL55-228ENST00000476267 HSPB9Q9BQS6 159 aa10.27□□□□□ -0.77
MRPL55-228ENST00000476267 FAM192AQ9GZU8 254 aa10.27□□□□□ -0.77
MRPL55-228ENST00000476267 GFOD1Q9NXC2 390 aa10.27□□□□□ -0.77
MRPL55-228ENST00000476267 ZNF580Q9UK33 172 aa10.27□□□□□ -0.77
MRPL55-228ENST00000476267 SACSQ9NZJ4 4579 aa10.27□□□□□ -0.77
MRPL55-228ENST00000476267 A0A1W2PP11 408 aa10.26□□□□□ -0.77
MRPL55-228ENST00000476267 TMEM30CPA0ZSE6 113 aa10.26□□□□□ -0.77
MRPL55-228ENST00000476267 ZNF736B4DX44 427 aaPredicted RBP10.26□□□□□ -0.77
MRPL55-228ENST00000476267 DYNC1I1O14576 645 aa10.26□□□□□ -0.77
MRPL55-228ENST00000476267 SLC31A2O15432 143 aa10.26□□□□□ -0.77
MRPL55-228ENST00000476267 MAGEB3O15480 346 aa10.26□□□□□ -0.77
MRPL55-228ENST00000476267 ORC5O43913 435 aa10.26□□□□□ -0.77
MRPL55-228ENST00000476267 MPZL2O60487 215 aa10.26□□□□□ -0.77
MRPL55-228ENST00000476267 RAMP3O60896 148 aa10.26□□□□□ -0.77
MRPL55-228ENST00000476267 OR7C1O76099 320 aaPredicted RBP10.26□□□□□ -0.77
MRPL55-228ENST00000476267 IGHG4P01861 327 aa10.26□□□□□ -0.77
MRPL55-228ENST00000476267 IGFBP3P17936 291 aaPredicted RBP10.26□□□□□ -0.77
MRPL55-228ENST00000476267 GBX2P52951 348 aaPredicted RBP10.26□□□□□ -0.77
MRPL55-228ENST00000476267 GP2P55259 537 aaKnown RBP10.26□□□□□ -0.77
MRPL55-228ENST00000476267 GPR50Q13585 617 aa10.26□□□□□ -0.77
MRPL55-228ENST00000476267 KIR2DS1Q14954 304 aa10.26□□□□□ -0.77
MRPL55-228ENST00000476267 MPV17LQ2QL34 196 aa10.26□□□□□ -0.77
MRPL55-228ENST00000476267 CCDC58Q4VC31 144 aa10.26□□□□□ -0.77
MRPL55-228ENST00000476267 UNQ9370/PRO34162Q6UXP9 181 aa10.26□□□□□ -0.77
MRPL55-228ENST00000476267 ZNF497Q6ZNH5 498 aa10.26□□□□□ -0.77
MRPL55-228ENST00000476267 GAPTQ8N292 157 aa10.26□□□□□ -0.77
MRPL55-228ENST00000476267 OR2T10Q8NGZ9 312 aa10.26□□□□□ -0.77
MRPL55-228ENST00000476267 OR8U1Q8NH10 309 aa10.26□□□□□ -0.77
MRPL55-228ENST00000476267 OR52N1Q8NH53 320 aa10.26□□□□□ -0.77
MRPL55-228ENST00000476267 UBALD1Q8TB05 177 aa10.26□□□□□ -0.77
MRPL55-228ENST00000476267 GPR148Q8TDV2 347 aa10.26□□□□□ -0.77
MRPL55-228ENST00000476267 TFAP2CQ92754 450 aa10.26□□□□□ -0.77
MRPL55-228ENST00000476267 ARL11Q969Q4 196 aa10.26□□□□□ -0.77
MRPL55-228ENST00000476267 S1PR3Q99500 378 aa10.26□□□□□ -0.77
MRPL55-228ENST00000476267 METTL9Q9H1A3 318 aa10.26□□□□□ -0.77
MRPL55-228ENST00000476267 FGF20Q9NP95 211 aaPredicted RBP10.26□□□□□ -0.77
MRPL55-228ENST00000476267 FAM118AQ9NWS6 357 aa10.26□□□□□ -0.77
MRPL55-228ENST00000476267 RCC2Q9P258 522 aaKnown RBP10.26□□□□□ -0.77
MRPL55-228ENST00000476267 ZMAT5Q9UDW3 170 aaKnown RBP10.26□□□□□ -0.77
MRPL55-228ENST00000476267 SCOCQ9UIL1 159 aa10.26□□□□□ -0.77
MRPL55-228ENST00000476267 SIRT4Q9Y6E7 314 aaPredicted RBP10.26□□□□□ -0.77
MRPL55-228ENST00000476267 IGHV3-43A0A0B4J1X8 118 aa10.25□□□□□ -0.77
MRPL55-228ENST00000476267 NCBP2LA6PVI3 153 aaKnown RBP10.25□□□□□ -0.77
MRPL55-228ENST00000476267 SDCBPO00560 298 aaPredicted RBP10.25□□□□□ -0.77
MRPL55-228ENST00000476267 WBP4O75554 376 aaKnown RBP10.25□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 113.5 ms