RNA–Protein interactions for RNA: ENST00000475944.1

CDRT1-205, CMT1A duplicated region transcript 1, humanhuman

TSL 3

Gene CDRT1, Length 457 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDRT1-205ENST00000475944 SEC14L6B5MCN3 397 aa8.5□□□□□ -1.05
CDRT1-205ENST00000475944 HTR3BO95264 441 aa8.5□□□□□ -1.05
CDRT1-205ENST00000475944 CD1BP29016 333 aa8.5□□□□□ -1.05
CDRT1-205ENST00000475944 ECI1P42126 302 aa8.5□□□□□ -1.05
CDRT1-205ENST00000475944 DEFB136Q30KP8 78 aa8.5□□□□□ -1.05
CDRT1-205ENST00000475944 LHFPL3Q86UP9 236 aa8.5□□□□□ -1.05
CDRT1-205ENST00000475944 LINC00311Q8N616 119 aa8.5□□□□□ -1.05
CDRT1-205ENST00000475944 Q8N6K4 173 aa8.5□□□□□ -1.05
CDRT1-205ENST00000475944 RNF152Q8N8N0 203 aa8.5□□□□□ -1.05
CDRT1-205ENST00000475944 C8orf31Q8N9H6 132 aa8.5□□□□□ -1.05
CDRT1-205ENST00000475944 Q8N9W7 124 aa8.5□□□□□ -1.05
CDRT1-205ENST00000475944 SUMF2Q8NBJ7 301 aa8.5□□□□□ -1.05
CDRT1-205ENST00000475944 OR8H1Q8NGG4 311 aa8.5□□□□□ -1.05
CDRT1-205ENST00000475944 OR52M1Q8NGK5 317 aa8.5□□□□□ -1.05
CDRT1-205ENST00000475944 OR10K1Q8NGX5 313 aa8.5□□□□□ -1.05
CDRT1-205ENST00000475944 C4orf3Q8WVX3 66 aa8.5□□□□□ -1.05
CDRT1-205ENST00000475944 LGALS12Q96DT0 336 aa8.5□□□□□ -1.05
CDRT1-205ENST00000475944 PRR25Q96S07 402 aa8.5□□□□□ -1.05
CDRT1-205ENST00000475944 RASL11BQ9BPW5 248 aa8.5□□□□□ -1.05
CDRT1-205ENST00000475944 PDCD1LG2Q9BQ51 273 aa8.5□□□□□ -1.05
CDRT1-205ENST00000475944 DPCDQ9BVM2 203 aaPredicted RBP8.5□□□□□ -1.05
CDRT1-205ENST00000475944 IFT22Q9H7X7 185 aa8.5□□□□□ -1.05
CDRT1-205ENST00000475944 ISG20L2Q9H9L3 353 aaKnown RBP8.5□□□□□ -1.05
CDRT1-205ENST00000475944 ST3GAL6Q9Y274 331 aa8.5□□□□□ -1.05
CDRT1-205ENST00000475944 TENM3Q9P273 2699 aa8.5□□□□□ -1.05
CDRT1-205ENST00000475944 TRAV39A0A0B4J263 110 aa8.49□□□□□ -1.05
CDRT1-205ENST00000475944 C3orf84H3BNL1 204 aa8.49□□□□□ -1.05
CDRT1-205ENST00000475944 SDCBPO00560 298 aaPredicted RBP8.49□□□□□ -1.05
CDRT1-205ENST00000475944 TXNL1O43396 289 aa8.49□□□□□ -1.05
CDRT1-205ENST00000475944 OR7C1O76099 320 aaPredicted RBP8.49□□□□□ -1.05
CDRT1-205ENST00000475944 FADS2O95864 444 aaKnown RBP8.49□□□□□ -1.05
CDRT1-205ENST00000475944 MOSP00540 346 aa8.49□□□□□ -1.05
CDRT1-205ENST00000475944 CSTBP04080 98 aaKnown RBP8.49□□□□□ -1.05
CDRT1-205ENST00000475944 ALPLP05186 524 aa8.49□□□□□ -1.05
CDRT1-205ENST00000475944 CD2P06729 351 aa8.49□□□□□ -1.05
CDRT1-205ENST00000475944 VDAC1P21796 283 aa8.49□□□□□ -1.05
CDRT1-205ENST00000475944 GBX2P52951 348 aaPredicted RBP8.49□□□□□ -1.05
CDRT1-205ENST00000475944 RBM11P57052 281 aaKnown RBP8.49□□□□□ -1.05
CDRT1-205ENST00000475944 Q3ZCU0 254 aa8.49□□□□□ -1.05
CDRT1-205ENST00000475944 NHLRC3Q5JS37 347 aa8.49□□□□□ -1.05
CDRT1-205ENST00000475944 NKAPLQ5M9Q1 402 aa8.49□□□□□ -1.05
CDRT1-205ENST00000475944 ZNF529Q6P280 563 aa8.49□□□□□ -1.05
CDRT1-205ENST00000475944 ASCL4Q6XD76 172 aa8.49□□□□□ -1.05
CDRT1-205ENST00000475944 LINC00596Q86U02 117 aa8.49□□□□□ -1.05
CDRT1-205ENST00000475944 OR51A2Q8NGJ7 313 aa8.49□□□□□ -1.05
CDRT1-205ENST00000475944 RTN4IP1Q8WWV3 396 aaPredicted RBP8.49□□□□□ -1.05
CDRT1-205ENST00000475944 ARL11Q969Q4 196 aa8.49□□□□□ -1.05
CDRT1-205ENST00000475944 S1PR3Q99500 378 aa8.49□□□□□ -1.05
CDRT1-205ENST00000475944 S100A13Q99584 98 aa8.49□□□□□ -1.05
CDRT1-205ENST00000475944 METTL9Q9H1A3 318 aa8.49□□□□□ -1.05
CDRT1-205ENST00000475944 PAK1IP1Q9NWT1 392 aaPredicted RBP8.49□□□□□ -1.05
CDRT1-205ENST00000475944 GFOD1Q9NXC2 390 aa8.49□□□□□ -1.05
CDRT1-205ENST00000475944 IL36GQ9NZH8 169 aa8.49□□□□□ -1.05
CDRT1-205ENST00000475944 C15orf65H3BRN8 121 aa8.48□□□□□ -1.05
CDRT1-205ENST00000475944 EI24O14681 340 aa8.48□□□□□ -1.05
CDRT1-205ENST00000475944 ORC5O43913 435 aa8.48□□□□□ -1.05
CDRT1-205ENST00000475944 IGHG4P01861 327 aa8.48□□□□□ -1.05
CDRT1-205ENST00000475944 OR5H8P0DN80 308 aa8.48□□□□□ -1.05
CDRT1-205ENST00000475944 SOX6P35712 828 aa8.48□□□□□ -1.05
CDRT1-205ENST00000475944 SOX2P48431 317 aa8.48□□□□□ -1.05
CDRT1-205ENST00000475944 INSL3P51460 131 aa8.48□□□□□ -1.05
CDRT1-205ENST00000475944 CFHR3Q02985 330 aa8.48□□□□□ -1.05
CDRT1-205ENST00000475944 MPV17LQ2QL34 196 aa8.48□□□□□ -1.05
CDRT1-205ENST00000475944 TMEM104Q8NE00 496 aa8.48□□□□□ -1.05
CDRT1-205ENST00000475944 OR52N1Q8NH53 320 aa8.48□□□□□ -1.05
CDRT1-205ENST00000475944 GPR148Q8TDV2 347 aa8.48□□□□□ -1.05
CDRT1-205ENST00000475944 NEK7Q8TDX7 302 aa8.48□□□□□ -1.05
CDRT1-205ENST00000475944 ST6GALNAC6Q969X2 333 aa8.48□□□□□ -1.05
CDRT1-205ENST00000475944 Q96MT0 163 aa8.48□□□□□ -1.05
CDRT1-205ENST00000475944 JAM3Q9BX67 310 aa8.48□□□□□ -1.05
CDRT1-205ENST00000475944 RAB9BQ9NP90 201 aa8.48□□□□□ -1.05
CDRT1-205ENST00000475944 PLSCR3Q9NRY6 295 aa8.48□□□□□ -1.05
CDRT1-205ENST00000475944 ERVK13-1Q9NX77 482 aa8.48□□□□□ -1.05
CDRT1-205ENST00000475944 TAS2R4Q9NYW5 299 aa8.48□□□□□ -1.05
CDRT1-205ENST00000475944 ZNF581Q9P0T4 197 aa8.48□□□□□ -1.05
CDRT1-205ENST00000475944 SCOCQ9UIL1 159 aa8.48□□□□□ -1.05
CDRT1-205ENST00000475944 ZNF580Q9UK33 172 aa8.48□□□□□ -1.05
CDRT1-205ENST00000475944 ZNF256Q9Y2P7 627 aaPredicted RBP8.48□□□□□ -1.05
CDRT1-205ENST00000475944 E9PI62 339 aa8.47□□□□□ -1.05
CDRT1-205ENST00000475944 AIPO00170 330 aa8.47□□□□□ -1.05
CDRT1-205ENST00000475944 GEMIN2O14893 280 aaKnown RBP8.47□□□□□ -1.05
CDRT1-205ENST00000475944 ZNF780AO75290 641 aaPredicted RBP8.47□□□□□ -1.05
CDRT1-205ENST00000475944 CIB2O75838 187 aa8.47□□□□□ -1.05
CDRT1-205ENST00000475944 ATP5HO75947 161 aa8.47□□□□□ -1.05
CDRT1-205ENST00000475944 CDRT1O95170 752 aa8.47□□□□□ -1.05
CDRT1-205ENST00000475944 IGF1P05019 195 aa8.47□□□□□ -1.05
CDRT1-205ENST00000475944 PSMB8P28062 276 aa8.47□□□□□ -1.05
CDRT1-205ENST00000475944 CHATP28329 748 aa8.47□□□□□ -1.05
CDRT1-205ENST00000475944 ZNF93P35789 620 aaPredicted RBP8.47□□□□□ -1.05
CDRT1-205ENST00000475944 ZNF137PP52743 207 aa8.47□□□□□ -1.05
CDRT1-205ENST00000475944 PPP3R1P63098 170 aa8.47□□□□□ -1.05
CDRT1-205ENST00000475944 RAB40BQ12829 278 aa8.47□□□□□ -1.05
CDRT1-205ENST00000475944 FHL3Q13643 280 aa8.47□□□□□ -1.05
CDRT1-205ENST00000475944 TMEM30BQ3MIR4 351 aa8.47□□□□□ -1.05
CDRT1-205ENST00000475944 ZIK1Q3SY52 487 aaPredicted RBP8.47□□□□□ -1.05
CDRT1-205ENST00000475944 ZNF260Q3ZCT1 412 aa8.47□□□□□ -1.05
CDRT1-205ENST00000475944 ATAD3CQ5T2N8 411 aa8.47□□□□□ -1.05
CDRT1-205ENST00000475944 DDI2Q5TDH0 399 aa8.47□□□□□ -1.05
CDRT1-205ENST00000475944 STX19Q8N4C7 294 aa8.47□□□□□ -1.05
CDRT1-205ENST00000475944 FAM71E2Q8N5Q1 922 aa8.47□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms