RNA–Protein interactions for RNA: ENST00000475146.1

CPNE1-223, Transcript of copine 1, humanhuman

TSL 3

Gene CPNE1, Length 627 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-223ENST00000475146 FAM90A7PA6NKC0 464 aa19.34■□□□□ 0.69
CPNE1-223ENST00000475146 FAM90A22PA8MWA6 464 aa19.34■□□□□ 0.69
CPNE1-223ENST00000475146 FAM90A12PA8MX19 464 aa19.34■□□□□ 0.69
CPNE1-223ENST00000475146 FAM90A5PA8MXJ8 464 aa19.34■□□□□ 0.69
CPNE1-223ENST00000475146 FAM90A23PA8MXZ1 464 aa19.34■□□□□ 0.69
CPNE1-223ENST00000475146 NPIPB11E5RHQ5 1161 aa19.34■□□□□ 0.69
CPNE1-223ENST00000475146 BUB1B-PAK6H3BSN5 160 aa19.34■□□□□ 0.69
CPNE1-223ENST00000475146 MPIG6BO95866 241 aa19.34■□□□□ 0.69
CPNE1-223ENST00000475146 FAM90A15PP0C7V4 464 aa19.34■□□□□ 0.69
CPNE1-223ENST00000475146 FAM90A13PP0C7W8 464 aa19.34■□□□□ 0.69
CPNE1-223ENST00000475146 FAM90A14PP0C7W9 464 aa19.34■□□□□ 0.69
CPNE1-223ENST00000475146 FAM90A24PP0C7X0 464 aa19.34■□□□□ 0.69
CPNE1-223ENST00000475146 UBBP0CG47 229 aa19.34■□□□□ 0.69
CPNE1-223ENST00000475146 ARHGDIBP52566 201 aa19.34■□□□□ 0.69
CPNE1-223ENST00000475146 KRTAP10-3P60369 221 aa19.34■□□□□ 0.69
CPNE1-223ENST00000475146 C1orf100Q5SVJ3 147 aa19.34■□□□□ 0.69
CPNE1-223ENST00000475146 ZNF497Q6ZNH5 498 aa19.34■□□□□ 0.69
CPNE1-223ENST00000475146 TMEM91Q6ZNR0 172 aa19.34■□□□□ 0.69
CPNE1-223ENST00000475146 OR2T6Q8NHC8 308 aa19.34■□□□□ 0.69
CPNE1-223ENST00000475146 CITED1Q99966 193 aa19.34■□□□□ 0.69
CPNE1-223ENST00000475146 ETAA1Q9NY74 926 aa19.34■□□□□ 0.69
CPNE1-223ENST00000475146 FBLN5Q9UBX5 448 aa19.34■□□□□ 0.69
CPNE1-223ENST00000475146 MT-ND4P03905 459 aa19.33■□□□□ 0.68
CPNE1-223ENST00000475146 GZMHP20718 246 aa19.33■□□□□ 0.68
CPNE1-223ENST00000475146 GNG10P50151 68 aa19.33■□□□□ 0.68
CPNE1-223ENST00000475146 PRR31Q5SQ13 230 aa19.33■□□□□ 0.68
CPNE1-223ENST00000475146 TPTE2P1Q5T6R2 138 aa19.33■□□□□ 0.68
CPNE1-223ENST00000475146 OR10A7Q8NGE5 316 aa19.33■□□□□ 0.68
CPNE1-223ENST00000475146 UBALD1Q8TB05 177 aa19.33■□□□□ 0.68
CPNE1-223ENST00000475146 ARL11Q969Q4 196 aa19.33■□□□□ 0.68
CPNE1-223ENST00000475146 MMP28Q9H239 520 aa19.33■□□□□ 0.68
CPNE1-223ENST00000475146 ZNF696Q9H7X3 374 aa19.33■□□□□ 0.68
CPNE1-223ENST00000475146 TRAPPC2LQ9UL33 140 aa19.33■□□□□ 0.68
CPNE1-223ENST00000475146 AMMECR1Q9Y4X0 333 aaPredicted RBP19.33■□□□□ 0.68
CPNE1-223ENST00000475146 ARL6IP5O75915 188 aa19.32■□□□□ 0.68
CPNE1-223ENST00000475146 FUT3P21217 361 aa19.32■□□□□ 0.68
CPNE1-223ENST00000475146 HTR2CP28335 458 aa19.32■□□□□ 0.68
CPNE1-223ENST00000475146 BRS3P32247 399 aa19.32■□□□□ 0.68
CPNE1-223ENST00000475146 KIR2DS4P43632 304 aa19.32■□□□□ 0.68
CPNE1-223ENST00000475146 GABARAPL2P60520 117 aa19.32■□□□□ 0.68
CPNE1-223ENST00000475146 OR10K2Q6IF99 312 aa19.32■□□□□ 0.68
CPNE1-223ENST00000475146 ACOT13Q9NPJ3 140 aa19.32■□□□□ 0.68
CPNE1-223ENST00000475146 PSG11Q9UQ72 335 aa19.32■□□□□ 0.68
CPNE1-223ENST00000475146 H3BUI4 141 aa19.31■□□□□ 0.68
CPNE1-223ENST00000475146 J3QR06 171 aa19.31■□□□□ 0.68
CPNE1-223ENST00000475146 FABP5Q01469 135 aa19.31■□□□□ 0.68
CPNE1-223ENST00000475146 NKAPLQ5M9Q1 402 aa19.31■□□□□ 0.68
CPNE1-223ENST00000475146 SIGIRRQ6IA17 410 aa19.31■□□□□ 0.68
CPNE1-223ENST00000475146 DTX3Q8N9I9 347 aa19.31■□□□□ 0.68
CPNE1-223ENST00000475146 OR6M1Q8NGM8 313 aa19.31■□□□□ 0.68
CPNE1-223ENST00000475146 OR4K15Q8NH41 348 aa19.31■□□□□ 0.68
CPNE1-223ENST00000475146 TOMM40LQ969M1 308 aa19.31■□□□□ 0.68
CPNE1-223ENST00000475146 RPEQ96AT9 228 aa19.31■□□□□ 0.68
CPNE1-223ENST00000475146 TMEM59Q9BXS4 323 aa19.31■□□□□ 0.68
CPNE1-223ENST00000475146 KCNK15Q9H427 330 aa19.31■□□□□ 0.68
CPNE1-223ENST00000475146 PLGRKTQ9HBL7 147 aa19.31■□□□□ 0.68
CPNE1-223ENST00000475146 UBE2QL1A1L167 161 aa19.3■□□□□ 0.68
CPNE1-223ENST00000475146 C15orf65H3BRN8 121 aa19.3■□□□□ 0.68
CPNE1-223ENST00000475146 SDCBPO00560 298 aaPredicted RBP19.3■□□□□ 0.68
CPNE1-223ENST00000475146 SLC22A1O15245 554 aa19.3■□□□□ 0.68
CPNE1-223ENST00000475146 PDCD6O75340 191 aa19.3■□□□□ 0.68
CPNE1-223ENST00000475146 VSIG8P0DPA2 414 aa19.3■□□□□ 0.68
CPNE1-223ENST00000475146 CD24P25063 80 aa19.3■□□□□ 0.68
CPNE1-223ENST00000475146 CALRP27797 417 aaKnown RBP19.3■□□□□ 0.68
CPNE1-223ENST00000475146 MNDAP41218 407 aa19.3■□□□□ 0.68
CPNE1-223ENST00000475146 EFNB2P52799 333 aa19.3■□□□□ 0.68
CPNE1-223ENST00000475146 SYT6Q5T7P8 510 aaPredicted RBP19.3■□□□□ 0.68
CPNE1-223ENST00000475146 CCDC144NLQ6NUI1 221 aa19.3■□□□□ 0.68
CPNE1-223ENST00000475146 AK6Q9Y3D8 172 aaKnown RBP19.3■□□□□ 0.68
CPNE1-223ENST00000475146 OOSP1A8MZH6 123 aa19.29■□□□□ 0.68
CPNE1-223ENST00000475146 LY6LH3BQJ8 138 aa19.29■□□□□ 0.68
CPNE1-223ENST00000475146 ORC5O43913 435 aa19.29■□□□□ 0.68
CPNE1-223ENST00000475146 C6orf183Q5T699 404 aa19.29■□□□□ 0.68
CPNE1-223ENST00000475146 C11orf88Q6PI97 169 aa19.29■□□□□ 0.68
CPNE1-223ENST00000475146 SLC16A12Q6ZSM3 486 aa19.29■□□□□ 0.68
CPNE1-223ENST00000475146 SVOPQ8N4V2 548 aa19.29■□□□□ 0.68
CPNE1-223ENST00000475146 OR10X1Q8NGY0 326 aa19.29■□□□□ 0.68
CPNE1-223ENST00000475146 KCNG3Q8TAE7 436 aa19.29■□□□□ 0.68
CPNE1-223ENST00000475146 NEDD4LQ96PU5 975 aa19.29■□□□□ 0.68
CPNE1-223ENST00000475146 ZNF702PQ9H963 129 aa19.29■□□□□ 0.68
CPNE1-223ENST00000475146 A0A1W2PPE3 182 aa19.28■□□□□ 0.68
CPNE1-223ENST00000475146 TIMM23O14925 209 aa19.28■□□□□ 0.68
CPNE1-223ENST00000475146 DENRO43583 198 aaKnown RBP19.28■□□□□ 0.68
CPNE1-223ENST00000475146 CA11O75493 328 aa19.28■□□□□ 0.68
CPNE1-223ENST00000475146 BPNT1O95861 308 aa19.28■□□□□ 0.68
CPNE1-223ENST00000475146 GLAP06280 429 aa19.28■□□□□ 0.68
CPNE1-223ENST00000475146 RPS27AP62979 156 aaKnown RBP19.28■□□□□ 0.68
CPNE1-223ENST00000475146 EMX1Q04741 257 aaPredicted RBP19.28■□□□□ 0.68
CPNE1-223ENST00000475146 MADCAM1Q13477 382 aa19.28■□□□□ 0.68
CPNE1-223ENST00000475146 P2RY14Q15391 338 aa19.28■□□□□ 0.68
CPNE1-223ENST00000475146 SSX1Q16384 188 aa19.28■□□□□ 0.68
CPNE1-223ENST00000475146 CAPSLQ8WWF8 208 aa19.28■□□□□ 0.68
CPNE1-223ENST00000475146 CYYR1Q96J86 154 aa19.28■□□□□ 0.68
CPNE1-223ENST00000475146 GFI1Q99684 422 aa19.28■□□□□ 0.68
CPNE1-223ENST00000475146 PRSS22Q9GZN4 317 aa19.28■□□□□ 0.68
CPNE1-223ENST00000475146 RAB9BQ9NP90 201 aa19.28■□□□□ 0.68
CPNE1-223ENST00000475146 RRP15Q9Y3B9 282 aaKnown RBP19.28■□□□□ 0.68
CPNE1-223ENST00000475146 IGHV3-43A0A0B4J1X8 118 aa19.27■□□□□ 0.68
CPNE1-223ENST00000475146 C12orf77C9JDV5 145 aa19.27■□□□□ 0.68
CPNE1-223ENST00000475146 SPINT2O43291 252 aa19.27■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms