RNA–Protein interactions for RNA: ENST00000474665.1

LIMD1-204, Transcript of LIM domains containing 1, humanhuman

TSL 3

Gene LIMD1, Length 513 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMD1-204ENST00000474665 MRGPRDQ8TDS7 321 aa5.7□□□□□ -1.5
LIMD1-204ENST00000474665 CCDC107Q8WV48 283 aa5.7□□□□□ -1.5
LIMD1-204ENST00000474665 BCL7BQ9BQE9 202 aa5.7□□□□□ -1.5
LIMD1-204ENST00000474665 PCGF1Q9BSM1 259 aa5.7□□□□□ -1.5
LIMD1-204ENST00000474665 URM1Q9BTM9 101 aaKnown RBP5.7□□□□□ -1.5
LIMD1-204ENST00000474665 SLIRPQ9GZT3 109 aaKnown RBP5.7□□□□□ -1.5
LIMD1-204ENST00000474665 ABCG5Q9H222 651 aa5.7□□□□□ -1.5
LIMD1-204ENST00000474665 ZMAT3Q9HA38 289 aaKnown RBP5.7□□□□□ -1.5
LIMD1-204ENST00000474665 SPACA1Q9HBV2 294 aa5.7□□□□□ -1.5
LIMD1-204ENST00000474665 SIRT7Q9NRC8 400 aa5.7□□□□□ -1.5
LIMD1-204ENST00000474665 RHBDL2Q9NX52 303 aa5.7□□□□□ -1.5
LIMD1-204ENST00000474665 ETAA1Q9NY74 926 aa5.7□□□□□ -1.5
LIMD1-204ENST00000474665 ABRACLQ9P1F3 81 aa5.7□□□□□ -1.5
LIMD1-204ENST00000474665 AK3Q9UIJ7 227 aa5.7□□□□□ -1.5
LIMD1-204ENST00000474665 HSF4Q9ULV5 492 aa5.7□□□□□ -1.5
LIMD1-204ENST00000474665 SPATA2Q9UM82 520 aa5.7□□□□□ -1.5
LIMD1-204ENST00000474665 ETV7Q9Y603 341 aa5.7□□□□□ -1.5
LIMD1-204ENST00000474665 TRAV40A0A0B4J280 105 aa5.69□□□□□ -1.5
LIMD1-204ENST00000474665 KBTBD11-OT1A0A1B0GTJ5 212 aa5.69□□□□□ -1.5
LIMD1-204ENST00000474665 TMEM30CPA0ZSE6 113 aa5.69□□□□□ -1.5
LIMD1-204ENST00000474665 C12orf77C9JDV5 145 aa5.69□□□□□ -1.5
LIMD1-204ENST00000474665 MCRIP1C9JLW8 97 aa5.69□□□□□ -1.5
LIMD1-204ENST00000474665 CTDSP2O14595 271 aa5.69□□□□□ -1.5
LIMD1-204ENST00000474665 SSX5O60225 188 aa5.69□□□□□ -1.5
LIMD1-204ENST00000474665 TOX4O94842 621 aa5.69□□□□□ -1.5
LIMD1-204ENST00000474665 EIF4EP06730 217 aaKnown RBP5.69□□□□□ -1.5
LIMD1-204ENST00000474665 IGHV1-8P0DP01 117 aa5.69□□□□□ -1.5
LIMD1-204ENST00000474665 PTHLHP12272 177 aa5.69□□□□□ -1.5
LIMD1-204ENST00000474665 HIST1H1DP16402 221 aaKnown RBP5.69□□□□□ -1.5
LIMD1-204ENST00000474665 GNB3P16520 340 aa5.69□□□□□ -1.5
LIMD1-204ENST00000474665 ZNF182P17025 639 aaPredicted RBP5.69□□□□□ -1.5
LIMD1-204ENST00000474665 OMGP23515 440 aa5.69□□□□□ -1.5
LIMD1-204ENST00000474665 CDK2P24941 298 aa5.69□□□□□ -1.5
LIMD1-204ENST00000474665 SSTR5P35346 364 aa5.69□□□□□ -1.5
LIMD1-204ENST00000474665 COMPP49747 757 aaPredicted RBP5.69□□□□□ -1.5
LIMD1-204ENST00000474665 RORCP51449 518 aa5.69□□□□□ -1.5
LIMD1-204ENST00000474665 LOXL3P58215 753 aa5.69□□□□□ -1.5
LIMD1-204ENST00000474665 PRAMEF5Q5TYX0 476 aa5.69□□□□□ -1.5
LIMD1-204ENST00000474665 METTL11BQ5VVY1 283 aa5.69□□□□□ -1.5
LIMD1-204ENST00000474665 RUSC1-AS1Q66K80 236 aa5.69□□□□□ -1.5
LIMD1-204ENST00000474665 TREML4Q6UXN2 200 aa5.69□□□□□ -1.5
LIMD1-204ENST00000474665 HEPN1Q6WQI6 88 aa5.69□□□□□ -1.5
LIMD1-204ENST00000474665 ZNF782Q6ZMW2 699 aaPredicted RBP5.69□□□□□ -1.5
LIMD1-204ENST00000474665 Q6ZTK2 550 aa5.69□□□□□ -1.5
LIMD1-204ENST00000474665 CROCCP3Q8IVE0 287 aa5.69□□□□□ -1.5
LIMD1-204ENST00000474665 PDZD9Q8IXQ8 264 aa5.69□□□□□ -1.5
LIMD1-204ENST00000474665 SAMD12Q8N8I0 201 aa5.69□□□□□ -1.5
LIMD1-204ENST00000474665 OR56B1Q8NGI3 324 aa5.69□□□□□ -1.5
LIMD1-204ENST00000474665 OR4K15Q8NH41 348 aa5.69□□□□□ -1.5
LIMD1-204ENST00000474665 RFESDQ8TAC1 157 aa5.69□□□□□ -1.5
LIMD1-204ENST00000474665 NEK7Q8TDX7 302 aa5.69□□□□□ -1.5
LIMD1-204ENST00000474665 C17orf50Q8WW18 174 aa5.69□□□□□ -1.5
LIMD1-204ENST00000474665 KCTD12Q96CX2 325 aaKnown RBP5.69□□□□□ -1.5
LIMD1-204ENST00000474665 RAB3CQ96E17 227 aa5.69□□□□□ -1.5
LIMD1-204ENST00000474665 KIRREL1Q96J84 757 aa5.69□□□□□ -1.5
LIMD1-204ENST00000474665 ZNF48Q96MX3 618 aaPredicted RBP5.69□□□□□ -1.5
LIMD1-204ENST00000474665 ZNF714Q96N38 554 aa5.69□□□□□ -1.5
LIMD1-204ENST00000474665 NEDD4LQ96PU5 975 aa5.69□□□□□ -1.5
LIMD1-204ENST00000474665 ATG5Q9H1Y0 275 aa5.69□□□□□ -1.5
LIMD1-204ENST00000474665 MIXL1Q9H2W2 232 aa5.69□□□□□ -1.5
LIMD1-204ENST00000474665 METTL8Q9H825 291 aaKnown RBP5.69□□□□□ -1.5
LIMD1-204ENST00000474665 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP5.69□□□□□ -1.5
LIMD1-204ENST00000474665 MBNL3Q9NUK0 354 aaKnown RBP5.69□□□□□ -1.5
LIMD1-204ENST00000474665 PLEKHJ1Q9NW61 149 aa5.69□□□□□ -1.5
LIMD1-204ENST00000474665 ZNF69Q9UC07 566 aa5.69□□□□□ -1.5
LIMD1-204ENST00000474665 UBE2J1Q9Y385 318 aaPredicted RBP5.69□□□□□ -1.5
LIMD1-204ENST00000474665 A0A075B6Q4 140 aa5.68□□□□□ -1.5
LIMD1-204ENST00000474665 IGKV1D-8A0A087WSZ0 117 aa5.68□□□□□ -1.5
LIMD1-204ENST00000474665 TRGV10A0A0A0MS01 117 aa5.68□□□□□ -1.5
LIMD1-204ENST00000474665 TRBV6-6A0A0A6YYG2 114 aa5.68□□□□□ -1.5
LIMD1-204ENST00000474665 IGHV1-69DA0A0B4J2H0 117 aa5.68□□□□□ -1.5
LIMD1-204ENST00000474665 IGKV1-6A0A0C4DH72 117 aa5.68□□□□□ -1.5
LIMD1-204ENST00000474665 TMEM235A6NFC5 223 aa5.68□□□□□ -1.5
LIMD1-204ENST00000474665 A6NHS1 94 aa5.68□□□□□ -1.5
LIMD1-204ENST00000474665 ODF3BA8MYP8 253 aa5.68□□□□□ -1.5
LIMD1-204ENST00000474665 ZNF701M0R085 212 aaPredicted RBP5.68□□□□□ -1.5
LIMD1-204ENST00000474665 HPGDSO60760 199 aa5.68□□□□□ -1.5
LIMD1-204ENST00000474665 TMEM127O75204 238 aa5.68□□□□□ -1.5
LIMD1-204ENST00000474665 CA11O75493 328 aa5.68□□□□□ -1.5
LIMD1-204ENST00000474665 CLPXO76031 633 aa5.68□□□□□ -1.5
LIMD1-204ENST00000474665 IGHV1-69P01742 117 aa5.68□□□□□ -1.5
LIMD1-204ENST00000474665 RBP4P02753 201 aa5.68□□□□□ -1.5
LIMD1-204ENST00000474665 ELK1P19419 428 aa5.68□□□□□ -1.5
LIMD1-204ENST00000474665 PAX6P26367 422 aa5.68□□□□□ -1.5
LIMD1-204ENST00000474665 GLP1RP43220 463 aa5.68□□□□□ -1.5
LIMD1-204ENST00000474665 ACTG1P63261 375 aa5.68□□□□□ -1.5
LIMD1-204ENST00000474665 DYNC1I2Q13409 638 aaKnown RBP5.68□□□□□ -1.5
LIMD1-204ENST00000474665 RBM39Q14498 530 aaKnown RBP5.68□□□□□ -1.5
LIMD1-204ENST00000474665 ZNF260Q3ZCT1 412 aa5.68□□□□□ -1.5
LIMD1-204ENST00000474665 CDNFQ49AH0 187 aa5.68□□□□□ -1.5
LIMD1-204ENST00000474665 BRD3OSQ6XYD6 125 aa5.68□□□□□ -1.5
LIMD1-204ENST00000474665 C9orf139Q6ZV77 190 aa5.68□□□□□ -1.5
LIMD1-204ENST00000474665 IZUMO1Q8IYV9 350 aa5.68□□□□□ -1.5
LIMD1-204ENST00000474665 DYNAPQ8N1N2 210 aa5.68□□□□□ -1.5
LIMD1-204ENST00000474665 OR1L1Q8NH94 360 aa5.68□□□□□ -1.5
LIMD1-204ENST00000474665 NANPQ8TBE9 248 aa5.68□□□□□ -1.5
LIMD1-204ENST00000474665 C22orf15Q8WYQ4 148 aa5.68□□□□□ -1.5
LIMD1-204ENST00000474665 LHX4Q969G2 390 aa5.68□□□□□ -1.5
LIMD1-204ENST00000474665 NXF2Q9GZY0 626 aaKnown RBP5.68□□□□□ -1.5
LIMD1-204ENST00000474665 TAS2R3Q9NYW6 316 aa5.68□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms