RNA–Protein interactions for RNA: ENST00000474643.5

VARS-223, Transcript of valyl-tRNA synthetase, humanhuman

TSL 5

Gene VARS, Length 885 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-223ENST00000474643 TRAV24A0A0B4J272 114 aa12.23□□□□□ -0.45
VARS-223ENST00000474643 ODAMA1E959 279 aa12.23□□□□□ -0.45
VARS-223ENST00000474643 MPIG6BO95866 241 aa12.23□□□□□ -0.45
VARS-223ENST00000474643 CSN2P05814 226 aa12.23□□□□□ -0.45
VARS-223ENST00000474643 MGMTP16455 207 aa12.23□□□□□ -0.45
VARS-223ENST00000474643 HTR2CP28335 458 aa12.23□□□□□ -0.45
VARS-223ENST00000474643 GLP1RP43220 463 aa12.23□□□□□ -0.45
VARS-223ENST00000474643 EFNB2P52799 333 aa12.23□□□□□ -0.45
VARS-223ENST00000474643 C22orf42Q6IC83 251 aa12.23□□□□□ -0.45
VARS-223ENST00000474643 SLC16A12Q6ZSM3 486 aa12.23□□□□□ -0.45
VARS-223ENST00000474643 TMEM219Q86XT9 240 aa12.23□□□□□ -0.45
VARS-223ENST00000474643 LYPD6Q86Y78 171 aa12.23□□□□□ -0.45
VARS-223ENST00000474643 CROCCP3Q8IVE0 287 aa12.23□□□□□ -0.45
VARS-223ENST00000474643 SUMF2Q8NBJ7 301 aa12.23□□□□□ -0.45
VARS-223ENST00000474643 FAM46BQ96A09 425 aa12.23□□□□□ -0.45
VARS-223ENST00000474643 MRPS24Q96EL2 167 aaKnown RBP12.23□□□□□ -0.45
VARS-223ENST00000474643 CHCHD6Q9BRQ6 235 aa12.23□□□□□ -0.45
VARS-223ENST00000474643 DPCDQ9BVM2 203 aaPredicted RBP12.23□□□□□ -0.45
VARS-223ENST00000474643 PRSS22Q9GZN4 317 aa12.23□□□□□ -0.45
VARS-223ENST00000474643 SPACA1Q9HBV2 294 aa12.23□□□□□ -0.45
VARS-223ENST00000474643 OR6C3Q9NZP0 311 aa12.23□□□□□ -0.45
VARS-223ENST00000474643 TCF19Q9Y242 345 aa12.23□□□□□ -0.45
VARS-223ENST00000474643 AK6Q9Y3D8 172 aaKnown RBP12.23□□□□□ -0.45
VARS-223ENST00000474643 HILPDAQ9Y5L2 63 aa12.23□□□□□ -0.45
VARS-223ENST00000474643 SESN1Q9Y6P5 492 aa12.23□□□□□ -0.45
VARS-223ENST00000474643 VWFP04275 2813 aa12.22□□□□□ -0.45
VARS-223ENST00000474643 SLC22A1O15245 554 aa12.22□□□□□ -0.45
VARS-223ENST00000474643 CHST1O43916 411 aa12.22□□□□□ -0.45
VARS-223ENST00000474643 FBXO24O75426 580 aa12.22□□□□□ -0.45
VARS-223ENST00000474643 IL1AP01583 271 aa12.22□□□□□ -0.45
VARS-223ENST00000474643 KCNJ3P48549 501 aa12.22□□□□□ -0.45
VARS-223ENST00000474643 RAB13P51153 203 aa12.22□□□□□ -0.45
VARS-223ENST00000474643 CTF1Q16619 201 aa12.22□□□□□ -0.45
VARS-223ENST00000474643 NSUN5P1Q3KNT7 163 aa12.22□□□□□ -0.45
VARS-223ENST00000474643 ZNF626Q68DY1 528 aa12.22□□□□□ -0.45
VARS-223ENST00000474643 ZNF565Q8N9K5 539 aa12.22□□□□□ -0.45
VARS-223ENST00000474643 OR6M1Q8NGM8 313 aa12.22□□□□□ -0.45
VARS-223ENST00000474643 COQ2Q96H96 371 aa12.22□□□□□ -0.45
VARS-223ENST00000474643 CLEC7AQ9BXN2 247 aa12.22□□□□□ -0.45
VARS-223ENST00000474643 BATF3Q9NR55 127 aa12.22□□□□□ -0.45
VARS-223ENST00000474643 KIF25Q9UIL4 384 aa12.22□□□□□ -0.45
VARS-223ENST00000474643 WNK1Q9H4A3 2382 aa12.21□□□□□ -0.45
VARS-223ENST00000474643 LOC100506127A0A0U1RQW1 187 aa12.21□□□□□ -0.45
VARS-223ENST00000474643 VGLL3A8MV65 326 aa12.21□□□□□ -0.45
VARS-223ENST00000474643 MCRIP1C9JLW8 97 aa12.21□□□□□ -0.45
VARS-223ENST00000474643 DLX6P56179 175 aa12.21□□□□□ -0.45
VARS-223ENST00000474643 RBM39Q14498 530 aaKnown RBP12.21□□□□□ -0.45
VARS-223ENST00000474643 P2RY14Q15391 338 aa12.21□□□□□ -0.45
VARS-223ENST00000474643 RAB11BQ15907 218 aa12.21□□□□□ -0.45
VARS-223ENST00000474643 C1orf100Q5SVJ3 147 aa12.21□□□□□ -0.45
VARS-223ENST00000474643 MINOS1Q5TGZ0 78 aa12.21□□□□□ -0.45
VARS-223ENST00000474643 GPR107Q5VW38 600 aa12.21□□□□□ -0.45
VARS-223ENST00000474643 OR52W1Q6IF63 320 aa12.21□□□□□ -0.45
VARS-223ENST00000474643 TCF23Q7RTU1 214 aa12.21□□□□□ -0.45
VARS-223ENST00000474643 C11orf42Q8N5U0 333 aa12.21□□□□□ -0.45
VARS-223ENST00000474643 TMEM104Q8NE00 496 aa12.21□□□□□ -0.45
VARS-223ENST00000474643 OR11H6Q8NGC7 330 aa12.21□□□□□ -0.45
VARS-223ENST00000474643 AKR1E2Q96JD6 320 aa12.21□□□□□ -0.45
VARS-223ENST00000474643 CENPOQ9BU64 300 aa12.21□□□□□ -0.45
VARS-223ENST00000474643 TMEM133Q9H2Q1 129 aa12.21□□□□□ -0.45
VARS-223ENST00000474643 IFT22Q9H7X7 185 aa12.21□□□□□ -0.45
VARS-223ENST00000474643 TAS2R3Q9NYW6 316 aa12.21□□□□□ -0.45
VARS-223ENST00000474643 ZNF581Q9P0T4 197 aa12.21□□□□□ -0.45
VARS-223ENST00000474643 MINOS1-NBL1R4GNA1 71 aa12.21□□□□□ -0.45
VARS-223ENST00000474643 NOTCH1P46531 2555 aa12.21□□□□□ -0.46
VARS-223ENST00000474643 IGHV2-26A0A0B4J1V2 119 aa12.2□□□□□ -0.46
VARS-223ENST00000474643 TMEM30CPA0ZSE6 113 aa12.2□□□□□ -0.46
VARS-223ENST00000474643 ODF3BA8MYP8 253 aa12.2□□□□□ -0.46
VARS-223ENST00000474643 TOR1AO14656 332 aa12.2□□□□□ -0.46
VARS-223ENST00000474643 NOL3O60936 208 aaKnown RBP12.2□□□□□ -0.46
VARS-223ENST00000474643 ARSBP15848 533 aa12.2□□□□□ -0.46
VARS-223ENST00000474643 RAB3BP20337 219 aa12.2□□□□□ -0.46
VARS-223ENST00000474643 CDK2P24941 298 aa12.2□□□□□ -0.46
VARS-223ENST00000474643 HTR1DP28221 377 aa12.2□□□□□ -0.46
VARS-223ENST00000474643 VDAC2P45880 294 aaPredicted RBP12.2□□□□□ -0.46
VARS-223ENST00000474643 SCAND1P57086 179 aa12.2□□□□□ -0.46
VARS-223ENST00000474643 PRAMEF5Q5TYX0 476 aa12.2□□□□□ -0.46
VARS-223ENST00000474643 RAB12Q6IQ22 244 aa12.2□□□□□ -0.46
VARS-223ENST00000474643 KCNG3Q8TAE7 436 aa12.2□□□□□ -0.46
VARS-223ENST00000474643 PLPPR1Q8TBJ4 325 aa12.2□□□□□ -0.46
VARS-223ENST00000474643 AJUBAQ96IF1 538 aa12.2□□□□□ -0.46
VARS-223ENST00000474643 TMEM59Q9BXS4 323 aa12.2□□□□□ -0.46
VARS-223ENST00000474643 RBM38Q9H0Z9 239 aaKnown RBP12.2□□□□□ -0.46
VARS-223ENST00000474643 PEX16Q9Y5Y5 336 aa12.2□□□□□ -0.46
VARS-223ENST00000474643 V9GY05 133 aa12.2□□□□□ -0.46
VARS-223ENST00000474643 FAM90A10PA6NDY2 464 aa12.19□□□□□ -0.46
VARS-223ENST00000474643 FAM90A18PA6NE21 464 aa12.19□□□□□ -0.46
VARS-223ENST00000474643 FAM90A16PA6NEW6 464 aa12.19□□□□□ -0.46
VARS-223ENST00000474643 FAM90A20PA6NIJ5 464 aa12.19□□□□□ -0.46
VARS-223ENST00000474643 FAM90A8PA6NJQ4 464 aa12.19□□□□□ -0.46
VARS-223ENST00000474643 FAM90A7PA6NKC0 464 aa12.19□□□□□ -0.46
VARS-223ENST00000474643 ZNF729A6NN14 1252 aaPredicted RBP12.19□□□□□ -0.46
VARS-223ENST00000474643 NOTOA8MTQ0 251 aa12.19□□□□□ -0.46
VARS-223ENST00000474643 FAM90A22PA8MWA6 464 aa12.19□□□□□ -0.46
VARS-223ENST00000474643 FAM90A12PA8MX19 464 aa12.19□□□□□ -0.46
VARS-223ENST00000474643 FAM90A5PA8MXJ8 464 aa12.19□□□□□ -0.46
VARS-223ENST00000474643 FAM90A23PA8MXZ1 464 aa12.19□□□□□ -0.46
VARS-223ENST00000474643 SLC17A2O00624 439 aa12.19□□□□□ -0.46
VARS-223ENST00000474643 BPNT1O95861 308 aa12.19□□□□□ -0.46
VARS-223ENST00000474643 FAM90A15PP0C7V4 464 aa12.19□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms