RNA–Protein interactions for RNA: ENST00000474421.1

PDLIM4-206, Transcript of PDZ and LIM domain 4, humanhuman

TSL 3

Gene PDLIM4, Length 1,084 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM4-206ENST00000474421 CLEC2DQ9UHP7 191 aa16.19■□□□□ 0.18
PDLIM4-206ENST00000474421 PIN1P1O15428 100 aa16.18■□□□□ 0.18
PDLIM4-206ENST00000474421 FGF16O43320 207 aa16.18■□□□□ 0.18
PDLIM4-206ENST00000474421 PRB2P02812 416 aaPredicted RBP16.18■□□□□ 0.18
PDLIM4-206ENST00000474421 TMEM11P17152 192 aa16.18■□□□□ 0.18
PDLIM4-206ENST00000474421 FSTP19883 344 aa16.18■□□□□ 0.18
PDLIM4-206ENST00000474421 TAS2R43P59537 309 aa16.18■□□□□ 0.18
PDLIM4-206ENST00000474421 LRRC36Q1X8D7 754 aa16.18■□□□□ 0.18
PDLIM4-206ENST00000474421 SLC22A6Q4U2R8 563 aa16.18■□□□□ 0.18
PDLIM4-206ENST00000474421 KHDC1LQ5JSQ8 128 aa16.18■□□□□ 0.18
PDLIM4-206ENST00000474421 NEK7Q8TDX7 302 aa16.18■□□□□ 0.18
PDLIM4-206ENST00000474421 MRPS24Q96EL2 167 aaKnown RBP16.18■□□□□ 0.18
PDLIM4-206ENST00000474421 RAB9BQ9NP90 201 aa16.18■□□□□ 0.18
PDLIM4-206ENST00000474421 TRAV39A0A0B4J263 110 aa16.17■□□□□ 0.18
PDLIM4-206ENST00000474421 PSMB11A5LHX3 300 aa16.17■□□□□ 0.18
PDLIM4-206ENST00000474421 EFCAB10A6NFE3 127 aa16.17■□□□□ 0.18
PDLIM4-206ENST00000474421 SH2D7A6NKC9 451 aaPredicted RBP16.17■□□□□ 0.18
PDLIM4-206ENST00000474421 ORC5O43913 435 aa16.17■□□□□ 0.18
PDLIM4-206ENST00000474421 LALBAP00709 142 aa16.17■□□□□ 0.18
PDLIM4-206ENST00000474421 GAPDHP04406 335 aaKnown RBP16.17■□□□□ 0.18
PDLIM4-206ENST00000474421 SLC35A2P78381 396 aa16.17■□□□□ 0.18
PDLIM4-206ENST00000474421 ZNF816Q0VGE8 651 aaPredicted RBP16.17■□□□□ 0.18
PDLIM4-206ENST00000474421 Q6ZPA2 131 aa16.17■□□□□ 0.18
PDLIM4-206ENST00000474421 CDH26Q8IXH8 852 aa16.17■□□□□ 0.18
PDLIM4-206ENST00000474421 C8orf31Q8N9H6 132 aa16.17■□□□□ 0.18
PDLIM4-206ENST00000474421 OR13C5Q8NGS8 318 aa16.17■□□□□ 0.18
PDLIM4-206ENST00000474421 MRAPQ8TCY5 172 aa16.17■□□□□ 0.18
PDLIM4-206ENST00000474421 ARL11Q969Q4 196 aa16.17■□□□□ 0.18
PDLIM4-206ENST00000474421 ZNF581Q9P0T4 197 aa16.17■□□□□ 0.18
PDLIM4-206ENST00000474421 DNAH3Q8TD57 4116 aa16.17■□□□□ 0.18
PDLIM4-206ENST00000474421 HSD17B6O14756 317 aa16.16■□□□□ 0.18
PDLIM4-206ENST00000474421 LOXL3P58215 753 aa16.16■□□□□ 0.18
PDLIM4-206ENST00000474421 RPS11P62280 158 aaKnown RBP eCLIP16.16■□□□□ 0.18
PDLIM4-206ENST00000474421 ADARB1P78563 741 aaKnown RBP16.16■□□□□ 0.18
PDLIM4-206ENST00000474421 ST3GAL4Q11206 333 aa16.16■□□□□ 0.18
PDLIM4-206ENST00000474421 LINC00311Q8N616 119 aa16.16■□□□□ 0.18
PDLIM4-206ENST00000474421 C5orf56Q8N8D9 126 aa16.16■□□□□ 0.18
PDLIM4-206ENST00000474421 ZNF485Q8NCK3 441 aa16.16■□□□□ 0.18
PDLIM4-206ENST00000474421 CHPT1Q8WUD6 406 aa16.16■□□□□ 0.18
PDLIM4-206ENST00000474421 THRSPQ92748 146 aa16.16■□□□□ 0.18
PDLIM4-206ENST00000474421 GGHQ92820 318 aa16.16■□□□□ 0.18
PDLIM4-206ENST00000474421 ORAI1Q96D31 301 aa16.16■□□□□ 0.18
PDLIM4-206ENST00000474421 PGLYRP3Q96LB9 341 aa16.16■□□□□ 0.18
PDLIM4-206ENST00000474421 CNOT2Q9NZN8 540 aaKnown RBP16.16■□□□□ 0.18
PDLIM4-206ENST00000474421 MRPS28Q9Y2Q9 187 aaKnown RBP16.16■□□□□ 0.18
PDLIM4-206ENST00000474421 TRBV5-7A0A0A0MS05 114 aa16.15■□□□□ 0.18
PDLIM4-206ENST00000474421 MCRIP1C9JLW8 97 aa16.15■□□□□ 0.18
PDLIM4-206ENST00000474421 C15orf65H3BRN8 121 aa16.15■□□□□ 0.18
PDLIM4-206ENST00000474421 CCRL2O00421 344 aa16.15■□□□□ 0.18
PDLIM4-206ENST00000474421 SDCBPO00560 298 aaPredicted RBP16.15■□□□□ 0.18
PDLIM4-206ENST00000474421 DUS4LO95620 317 aaKnown RBP16.15■□□□□ 0.18
PDLIM4-206ENST00000474421 IGKV1D-33P01593 117 aa16.15■□□□□ 0.18
PDLIM4-206ENST00000474421 IGKV1-33P01594 117 aa16.15■□□□□ 0.18
PDLIM4-206ENST00000474421 IL3RAP26951 378 aa16.15■□□□□ 0.18
PDLIM4-206ENST00000474421 DIAPH2-AS1Q14236 149 aa16.15■□□□□ 0.18
PDLIM4-206ENST00000474421 TMEM30BQ3MIR4 351 aa16.15■□□□□ 0.18
PDLIM4-206ENST00000474421 Q3ZCU0 254 aa16.15■□□□□ 0.18
PDLIM4-206ENST00000474421 ZNF497Q6ZNH5 498 aa16.15■□□□□ 0.18
PDLIM4-206ENST00000474421 JAGN1Q8N5M9 183 aa16.15■□□□□ 0.18
PDLIM4-206ENST00000474421 ZFP41Q8N8Y5 198 aa16.15■□□□□ 0.18
PDLIM4-206ENST00000474421 RCC1LQ96I51 464 aaKnown RBP16.15■□□□□ 0.18
PDLIM4-206ENST00000474421 TRAV8-7A0A075B6U6 113 aa16.14■□□□□ 0.17
PDLIM4-206ENST00000474421 A0A1W2PPE3 182 aa16.14■□□□□ 0.17
PDLIM4-206ENST00000474421 AIPO00170 330 aa16.14■□□□□ 0.17
PDLIM4-206ENST00000474421 MT-ND4P03905 459 aa16.14■□□□□ 0.17
PDLIM4-206ENST00000474421 IGLL1P15814 213 aa16.14■□□□□ 0.17
PDLIM4-206ENST00000474421 EBI3Q14213 229 aa16.14■□□□□ 0.17
PDLIM4-206ENST00000474421 HNF4GQ14541 408 aa16.14■□□□□ 0.17
PDLIM4-206ENST00000474421 FOXB2Q5VYV0 432 aa16.14■□□□□ 0.17
PDLIM4-206ENST00000474421 GLIPR1L1Q6UWM5 242 aa16.14■□□□□ 0.17
PDLIM4-206ENST00000474421 MOB3BQ86TA1 216 aa16.14■□□□□ 0.17
PDLIM4-206ENST00000474421 C8orf59Q8N0T1 100 aaPredicted RBP16.14■□□□□ 0.17
PDLIM4-206ENST00000474421 OR51D1Q8NGF3 324 aa16.14■□□□□ 0.17
PDLIM4-206ENST00000474421 CCDC107Q8WV48 283 aa16.14■□□□□ 0.17
PDLIM4-206ENST00000474421 MUL1Q969V5 352 aa16.14■□□□□ 0.17
PDLIM4-206ENST00000474421 OR14A2Q96R54 314 aa16.14■□□□□ 0.17
PDLIM4-206ENST00000474421 AURKAIP1Q9NWT8 199 aaPredicted RBP16.14■□□□□ 0.17
PDLIM4-206ENST00000474421 GFOD1Q9NXC2 390 aa16.14■□□□□ 0.17
PDLIM4-206ENST00000474421 RCC2Q9P258 522 aaKnown RBP16.14■□□□□ 0.17
PDLIM4-206ENST00000474421 IGHV1-3A0A0C4DH29 117 aa16.13■□□□□ 0.17
PDLIM4-206ENST00000474421 A0A1W2PP11 408 aa16.13■□□□□ 0.17
PDLIM4-206ENST00000474421 MAGEA13PA6NCF6 341 aa16.13■□□□□ 0.17
PDLIM4-206ENST00000474421 SERPINE3A8MV23 424 aa16.13■□□□□ 0.17
PDLIM4-206ENST00000474421 MYL12BO14950 172 aa16.13■□□□□ 0.17
PDLIM4-206ENST00000474421 SPINT2O43291 252 aa16.13■□□□□ 0.17
PDLIM4-206ENST00000474421 CD1AP06126 327 aa16.13■□□□□ 0.17
PDLIM4-206ENST00000474421 CAPGP40121 348 aa16.13■□□□□ 0.17
PDLIM4-206ENST00000474421 SLC35B1P78383 322 aa16.13■□□□□ 0.17
PDLIM4-206ENST00000474421 DOC2BQ14184 412 aa16.13■□□□□ 0.17
PDLIM4-206ENST00000474421 C6orf183Q5T699 404 aa16.13■□□□□ 0.17
PDLIM4-206ENST00000474421 AWAT2Q6E213 333 aa16.13■□□□□ 0.17
PDLIM4-206ENST00000474421 TRAT1Q6PIZ9 186 aa16.13■□□□□ 0.17
PDLIM4-206ENST00000474421 C10orf99Q6UWK7 81 aa16.13■□□□□ 0.17
PDLIM4-206ENST00000474421 FOXRED2Q8IWF2 684 aa16.13■□□□□ 0.17
PDLIM4-206ENST00000474421 IZUMO1Q8IYV9 350 aa16.13■□□□□ 0.17
PDLIM4-206ENST00000474421 COMMD1Q8N668 190 aa16.13■□□□□ 0.17
PDLIM4-206ENST00000474421 TRAPPC2LQ9UL33 140 aa16.13■□□□□ 0.17
PDLIM4-206ENST00000474421 FAM90A10PA6NDY2 464 aa16.12■□□□□ 0.17
PDLIM4-206ENST00000474421 FAM90A7PA6NKC0 464 aa16.12■□□□□ 0.17
PDLIM4-206ENST00000474421 FAM90A23PA8MXZ1 464 aa16.12■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 50.7 ms